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The map label for this gene is trg [H]

Identifier: 91210665

GI number: 91210665

Start: 1566910

End: 1567380

Strand: Direct

Name: trg [H]

Synonym: UTI89_C1642

Alternate gene names: 91210665

Gene position: 1566910-1567380 (Clockwise)

Preceding gene: 91210663

Following gene: 91210667

Centisome position: 30.93

GC content: 53.08

Gene sequence:

>471_bases
GTGAATGTCAGAATCGTGTTACTCTCGCAAGGCCCTGGATTTGCCGTTGTCGCCAGCGAAGTACGGACACTCGCAAGCCG
CAGCGCCCAGGCGGCGAAAGAGATTGAAGGCTTGATCAGTGAATCAGTCAGATTAATTGACCTGGGATCGGATGAGGTGG
CAACGGCAGGGAAAATCATGTGCACTATTGTTGATGCCGTCGCGAGTGTCACACATATCATGCAGGAAATCGCCACCGCC
TCGGGTGAACAAAGTCGAGGCATAACGCAGGTTAGCCAGGCGATTTCTGAAATGGATAAGGTGACGCAACAGAATGCTTC
TCTGGTAGAAGAGGCCTCAACGGCAGCGGTGTCCCTTGAAGAACAGGCGGCACGACTAACTGAGGCGGTGGACGTATTCC
GTCTCAACAAACATTCTGTGTCGGCAGAACCTCGCGGAGCTTGTGAACCAGTTAGTTTTGCTACGGTGTGA

Upstream 100 bases:

>100_bases
TCCCCGCGCTTGCCCTTACCTGGACGTGCAGGCCATGAGCGCAGCAACTTCCTTATCACCGTCCCGGAACCGCAGTTCGT
AGAGCGATTGTCGGGTCAGT

Downstream 100 bases:

>100_bases
AAATGTTAAAGGAGGGATCGACAGATCCCTTCACCTTTCAGAACGGCATTGATTTTCGAATAGCGTTAATCATCAACTGG
CAACCAGAAGAGAACGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNVRIVLLSQGPGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKIMCTIVDAVASVTHIMQEIATA
SGEQSRGITQVSQAISEMDKVTQQNASLVEEASTAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGACEPVSFATV

Sequences:

>Translated_156_residues
MNVRIVLLSQGPGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKIMCTIVDAVASVTHIMQEIATA
SGEQSRGITQVSQAISEMDKVTQQNASLVEEASTAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGACEPVSFATV
>Mature_156_residues
MNVRIVLLSQGPGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKIMCTIVDAVASVTHIMQEIATA
SGEQSRGITQVSQAISEMDKVTQQNASLVEEASTAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGACEPVSFATV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=147, Percent_Identity=94.5578231292517, Blast_Score=266, Evalue=6e-73,
Organism=Escherichia coli, GI1788195, Length=143, Percent_Identity=61.5384615384615, Blast_Score=142, Evalue=8e-36,
Organism=Escherichia coli, GI1788194, Length=132, Percent_Identity=60.6060606060606, Blast_Score=139, Evalue=7e-35,
Organism=Escherichia coli, GI2367378, Length=129, Percent_Identity=64.3410852713178, Blast_Score=126, Evalue=6e-31,
Organism=Escherichia coli, GI1789453, Length=125, Percent_Identity=43.2, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 16343; Mature: 16343

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRIVLLSQGPGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKIM
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH
CTIVDAVASVTHIMQEIATASGEQSRGITQVSQAISEMDKVTQQNASLVEEASTAAVSLE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAARLTEAVDVFRLNKHSVSAEPRGACEPVSFATV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVRIVLLSQGPGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKIM
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHH
CTIVDAVASVTHIMQEIATASGEQSRGITQVSQAISEMDKVTQQNASLVEEASTAAVSLE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAARLTEAVDVFRLNKHSVSAEPRGACEPVSFATV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]