BacMap

Definition	Escherichia coli UTI89 chromosome, complete genome.
Accession	NC_007946
Length	5,065,741

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The map label for this gene is dbpA [H]

Identifier: 91210637

GI number: 91210637

Start: 1526667

End: 1528040

Strand: Direct

Name: dbpA [H]

Synonym: UTI89_C1614

Alternate gene names: 91210637

Gene position: 1526667-1528040 (Clockwise)

Preceding gene: 91210636

Following gene: 91210644

Centisome position: 30.14

GC content: 52.11

Gene sequence:

>1374_bases
GTGACCGCTTTTTCTACCCTGAATGTTTTGCCTCCCGCCCAACTCACAAACCTTAATGAGTTGGGTTATTTAACCATGAC
GCCGGTGCAGGACGCCGCGCTTCCGGCGATCCTTGCCGGAAAAGATGTTCGCGTGCAGGCGAAAACCGGCAGCGGCAAAA
CGGCGGCTTTTGGCCTCGGCTTGTTACAGCAAATTGATGCGTCGCTATTTCAAACCCAGGCTTTAGTGCTGTGTCCTACG
CGTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTG
CGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGCCGTTTGC
TGGATCACCTGCAAAAAGGCACTGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGAT
ATGGGATTTAGCGACGCCATTGATGATGTCATCCGTTTTGCGCCAGCATCTCGGCAGACGCTTCTGTTTTCGGCAACCTG
GCCGGAGGCCATCGCCGCAATCAGCGGAAGAGTGCAACGCGATCCTTTAGCGATTGAAATTGACTCAACAGATGCTCTGC
CACCTATTGAACAACAATTTTATGAGACATCCAGCAAAGGCAAAATTCCTCTGTTGCAACGGTTATTAAGCTTGCATCAG
CCATCCTCTTGCGTGGTGTTTTGCAATACCAAAAAAGATTGCCAGTCTGTCTGCGACGTGCTGAATGAAGTAGGGCAAAG
TGCATTGTCGTTACACGGCGATCTGGAGCAACGCGATCGCGATCAGACCCTGGTACGTTTTGCTAACGGTAGCGCCCGTG
TACTGGTCGCGACTGATGTTGCTGCGCGTGGTCTGGATATAAAATCGCTTGAGCTGGTGGTGAACTTTGAGCTGGCGTGG
GACCCTGAAGTTCATGTACATCGCATCGGTCGTACAGCTCGTGCAGGAAATAGCGGTCTGGCGATCAGTTTCTGTGCCCC
GGAAGAAGCACAGCGGGCCAATATCATTTCTGACATGTTGCAGATAAAACTTAACTGGCAAACGCTGCCAGCGAATAGTT
CCATTGTGCCGCTGGAAGCAGAAATGGCAACGTTGTGTATCGATGGCGGGAAAAAAGCCAAAATGCGCCCGGGTGATGTA
TTAGGTGCGCTGACAGGAGACATCGGGCTTGATGGCGCAGATATTGGCAAAATCGCCGTGCATCCGGCGCATGTTTATGT
CGCGGTGCGTCAGGCTGTTGCTCATAAAGCATGGAAACAGCTACAGGGCGGGAAGATTAAAGGAAAAACGTGCCGGGTGC
GGTTATTAAAATAA

Upstream 100 bases:

>100_bases
CACCACCCGATGAAGAACCGATTAAATTGTCGCATCGTGAGCGTAGATCTGCGAGGATACGCGCCTGCTGACTTTGCGTC
GATGACCACGAGAATAGATT

Downstream 100 bases:

>100_bases
TGAAATGTTGAATCGCAGGGTGCAAGAGTAAACATCTTCTTCGGGATTGCCGGATGCGACGCTGGCCGCGTCTTATCCGG
CCTCCATAAGAGTAGCCCGA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQSVCDVLNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAW
DPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTLPANSSIVPLEAEMATLCIDGGKKAKMRPGDV
LGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Sequences:

>Translated_457_residues
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQSVCDVLNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAW
DPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTLPANSSIVPLEAEMATLCIDGGKKAKMRPGDV
LGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
>Mature_456_residues
TAFSTLNVLPPAQLTNLNELGYLTMTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTR
ELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDM
GFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQP
SSCVVFCNTKKDCQSVCDVLNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWD
PEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTLPANSSIVPLEAEMATLCIDGGKKAKMRPGDVL
GALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=37.4331550802139, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=34.3839541547278, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=31.2849162011173, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI224593278, Length=387, Percent_Identity=36.4341085271318, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=36.9627507163324, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=38.0697050938338, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=36.8715083798883, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=38.0697050938338, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=38.0697050938338, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI262118318, Length=399, Percent_Identity=36.3408521303258, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI21071032, Length=350, Percent_Identity=37.1428571428571, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI45446747, Length=348, Percent_Identity=36.2068965517241, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI45446743, Length=348, Percent_Identity=36.2068965517241, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI262231852, Length=399, Percent_Identity=36.3408521303258, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI216548263, Length=399, Percent_Identity=36.3408521303258, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=37.3655913978495, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=37.3655913978495, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI13518015, Length=399, Percent_Identity=36.3408521303258, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=34.025974025974, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI148613856, Length=372, Percent_Identity=34.6774193548387, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI38201710, Length=372, Percent_Identity=34.6774193548387, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4758112, Length=372, Percent_Identity=30.3763440860215, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI18375623, Length=372, Percent_Identity=30.3763440860215, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI21040371, Length=372, Percent_Identity=30.3763440860215, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI4758138, Length=349, Percent_Identity=34.9570200573066, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI38327634, Length=361, Percent_Identity=36.2880886426593, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=34.5646437994723, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=34.2618384401114, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI13129006, Length=374, Percent_Identity=33.1550802139037, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=34.1880341880342, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=34.0909090909091, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=37.3563218390805, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=34.375, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=34.375, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=31.3390313390313, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI41327779, Length=370, Percent_Identity=32.972972972973, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI256223453, Length=395, Percent_Identity=30.6329113924051, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI13514831, Length=389, Percent_Identity=34.7043701799486, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI41327776, Length=348, Percent_Identity=33.3333333333333, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=31.0991957104558, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI6005743, Length=347, Percent_Identity=31.4121037463977, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI8922886, Length=347, Percent_Identity=31.4121037463977, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI62241022, Length=336, Percent_Identity=31.547619047619, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=31.1163895486936, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI9506931, Length=391, Percent_Identity=29.156010230179, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI62241024, Length=359, Percent_Identity=30.9192200557103, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=27.8551532033426, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=27.8551532033426, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=28.9940828402367, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI9966805, Length=334, Percent_Identity=31.437125748503, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI256773275, Length=357, Percent_Identity=32.2128851540616, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI154759257, Length=401, Percent_Identity=29.1770573566085, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI20336298, Length=235, Percent_Identity=34.8936170212766, Blast_Score=109, Evalue=6e-24,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=98.6870897155361, Blast_Score=919, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=41.3513513513514, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=38.860103626943, Blast_Score=241, Evalue=9e-65,
Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=36.4672364672365, Blast_Score=198, Evalue=5e-52,
Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=37.910447761194, Blast_Score=187, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=35.0684931506849, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=35.5300859598854, Blast_Score=234, Evalue=8e-62,
Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=38.3561643835616, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI71987143, Length=334, Percent_Identity=35.3293413173653, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=357, Percent_Identity=38.0952380952381, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=357, Percent_Identity=38.0952380952381, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=357, Percent_Identity=38.375350140056, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=30.8571428571429, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI71982858, Length=362, Percent_Identity=30.3867403314917, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI115533224, Length=361, Percent_Identity=35.1800554016621, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=36.1344537815126, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=366, Percent_Identity=34.6994535519126, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17507877, Length=394, Percent_Identity=34.010152284264, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=36.9393139841689, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=36.8271954674221, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=33.5917312661499, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=34.4827586206897, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=382, Percent_Identity=34.0314136125654, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=382, Percent_Identity=34.0314136125654, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=32.7077747989276, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI115532548, Length=353, Percent_Identity=33.7110481586402, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=408, Percent_Identity=31.3725490196078, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17552642, Length=337, Percent_Identity=34.4213649851632, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17537549, Length=379, Percent_Identity=31.9261213720317, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=339, Percent_Identity=35.1032448377581, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536099, Length=412, Percent_Identity=31.5533980582524, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536101, Length=412, Percent_Identity=31.5533980582524, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536103, Length=403, Percent_Identity=31.7617866004963, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=32.2766570605187, Blast_Score=172, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17553716, Length=350, Percent_Identity=30, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI193206561, Length=329, Percent_Identity=30.6990881458967, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=30.8900523560209, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=400, Percent_Identity=28.25, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=31.6753926701571, Blast_Score=137, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=29.1457286432161, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.8472906403941, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=32.8205128205128, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=30.0531914893617, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17508543, Length=359, Percent_Identity=28.9693593314763, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=397, Percent_Identity=27.7078085642317, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.190332326284, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25148205, Length=340, Percent_Identity=25.8823529411765, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=82, Percent_Identity=43.9024390243902, Blast_Score=89, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.3888888888889, Blast_Score=223, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=345, Percent_Identity=40, Blast_Score=220, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6324217, Length=369, Percent_Identity=37.1273712737127, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=33.5106382978723, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=36.8983957219251, Blast_Score=212, Evalue=9e-56,
Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=32.8267477203647, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=35.054347826087, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6323947, Length=384, Percent_Identity=35.9375, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=31.1797752808989, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6325138, Length=368, Percent_Identity=35.054347826087, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=354, Percent_Identity=36.7231638418079, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6322912, Length=331, Percent_Identity=33.8368580060423, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=331, Percent_Identity=33.8368580060423, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=31.4666666666667, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=34.1145833333333, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=32.033426183844, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=29.5843520782396, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=32.3287671232877, Blast_Score=174, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=30.4568527918782, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=438, Percent_Identity=30.5936073059361, Blast_Score=163, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6320400, Length=356, Percent_Identity=29.2134831460674, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=349, Percent_Identity=30.6590257879656, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6323306, Length=401, Percent_Identity=26.1845386533666, Blast_Score=127, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=25.8522727272727, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6321374, Length=413, Percent_Identity=23.728813559322, Blast_Score=94, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6322876, Length=159, Percent_Identity=34.5911949685535, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24584399, Length=365, Percent_Identity=38.6301369863014, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24645031, Length=353, Percent_Identity=34.5609065155807, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.5742296918768, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=37.7410468319559, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI21356161, Length=389, Percent_Identity=34.1902313624679, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24585582, Length=345, Percent_Identity=36.5217391304348, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI28575014, Length=340, Percent_Identity=36.4705882352941, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI28574962, Length=394, Percent_Identity=34.7715736040609, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=33.134328358209, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=38.4196185286104, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=33.134328358209, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=34.3243243243243, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24644483, Length=382, Percent_Identity=34.2931937172775, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24644487, Length=382, Percent_Identity=34.2931937172775, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI45551833, Length=382, Percent_Identity=34.2931937172775, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24644485, Length=382, Percent_Identity=34.2931937172775, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI281361218, Length=382, Percent_Identity=34.2931937172775, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24644481, Length=382, Percent_Identity=34.2931937172775, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24644479, Length=386, Percent_Identity=34.4559585492228, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=33.8666666666667, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=33.8666666666667, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=33.8666666666667, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=33.8666666666667, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=35.149863760218, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI17977678, Length=349, Percent_Identity=35.243553008596, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24581954, Length=387, Percent_Identity=30.2325581395349, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24581952, Length=387, Percent_Identity=30.2325581395349, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24581956, Length=387, Percent_Identity=30.2325581395349, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=33.0578512396694, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=34.0782122905028, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=34.0782122905028, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=32.6259946949602, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI281365720, Length=308, Percent_Identity=35.7142857142857, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=34.3163538873995, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17647335, Length=376, Percent_Identity=28.7234042553192, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24643725, Length=388, Percent_Identity=29.1237113402062, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=30.1587301587302, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=30.2114803625378, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24666101, Length=390, Percent_Identity=30.7692307692308, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19920478, Length=355, Percent_Identity=29.8591549295775, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI20130173, Length=332, Percent_Identity=28.0120481927711, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=32.9004329004329, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=32.9004329004329, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24640164, Length=372, Percent_Identity=22.8494623655914, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17136666, Length=222, Percent_Identity=27.4774774774775, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49317; Mature: 49185

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCCCCCCCCCHHHCCCCCCCCEEECCCCHHHCCCEECCCCEEEEEECCCCCCHHHHHH
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
CCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
EEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC
PSSCVVFCNTKKDCQSVCDVLNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCEEEEEEECH
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
HHCCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCEEEEEECCCHHHHHHHHHHHH
QIKLNWQTLPANSSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
EEEEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TAFSTLNVLPPAQLTNLNELGYLTMTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCCCCCCCCHHHCCCCCCCCEEECCCCHHHCCCEECCCCEEEEEECCCCCCHHHHHH
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
CCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
EEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC
PSSCVVFCNTKKDCQSVCDVLNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECCCEEEEEEECH
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDML
HHCCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCEEEEEECCCHHHHHHHHHHHH
QIKLNWQTLPANSSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
EEEEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE
HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]