| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
Click here to switch to the map view.
The map label for this gene is ycjX [H]
Identifier: 91210615
GI number: 91210615
Start: 1503300
End: 1504769
Strand: Direct
Name: ycjX [H]
Synonym: UTI89_C1592
Alternate gene names: 91210615
Gene position: 1503300-1504769 (Clockwise)
Preceding gene: 91210613
Following gene: 91210616
Centisome position: 29.68
GC content: 54.08
Gene sequence:
>1470_bases ATGGCCTGGCCCCCACATTCATATTCTTACGAACGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGAAGCG ACTTAAAAATGAACTCAATGCGCTGGTGAATCGGGGTGTCGACAGACATCTGCGCCTCGCTGTAACCGGACTTAGCCGCA GCGGCAAAACAGCGTTTATCACCGCGATGGTTAATCAGTTGCTCAATATTCATGCCGGAGCACGTTTGCCGCTTTTAAGT GCGGTGCGTGAAGAGCGCCTGCTGGGCGTAAAACGCATTCCCCAGCGTGACTTTGGCATTCCGCGCTTCACCTATGATGA AGGGTTGGCGCAGTTATATGGCGATCCTCCCGCCTGGCCGACGCCTACGCGCGGCGTCAGTGAAATTCGCCTGGCGTTAC GTTTTAAATCGAACGATTCGCTGCTGCGCCACTTTAAGGACACCTCCACGCTGTATCTTGAGATTGTGGATTATCCCGGC GAATGGCTGCTCGACCTGCCGATGCTGGCACAGGACTATTTTAGCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCA GCGCGGCGAATGGTCGGCGAAATGGCGAATGATGTGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGG CAGACATTGCCGCCGCGTGGACCGATTATCTCCATCACTGCAAACAGCAGGGGCTGCACTTTATTCAGCCAGGACGCTTT GTTTTGCCTGGCGATATGGCAGGAGCGCCCGCGCTGCAATTCTTCCCATGGCCAGATGTCGATGCCTGGGGCGAGTCTAA ACTGGCGCAGGCCGATAAACACACCAACGCCGGAATGTTGCGCGAGCGTTTTAATTATTACTGCGAGAAAGTGGTGAAGG GGTTCTATAAGAATCACTTCCTGCGTTTTGACCGCCAGATTGTGCTGGTGGACTGCCTGCAACCGCTCAACAGTGGACCA CAGGCATTTAATGATATGCGTCTGGCGCTGACGCAGCTGATGCAAAGTTTCCACTACGGGCAGCGTACCCTGTTCCGGCG TTTGTTTTCGCCGGTTATTGATAAGCTATTGTTTGCTGCCACTAAAGCGGACCATGTGGCCATCGATCAGCACGCCAATA TGGTTTCATTGCTGCAACAACTGATTCAGGATGCCTGGCAAAATGCGGCGTTCGAAGGGATCAGTATGGACTGCCTGGGG CTGGCGTCTGTTCAGGCGACCACCAGCGGAATTATTGATGTTAACGGTGAGAAAATCCCGGCGCTGCGCGGTAATCGACT CAGCGATGGCGCACCGCTCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAG GCTTCCAGTTTGAGGCGTTTCGTCCGCAGGTGATGGATGTCGACAAACCGCTACCGCATATTCGTCTTGATGCTGCGCTG GAATTTTTAATAGGAGATAAATTGCGATGA
Upstream 100 bases:
>100_bases TAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCCGTCGATGACA ACACGGGTAGTTGATAATCA
Downstream 100 bases:
>100_bases CCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCACTGGAGGTCGATCAGAATCCAAAATTCAGGGCGCAGCAGACC TTTGACGAAAATCAGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MAWPPHSYSYERFFFWSSEQHRTAMKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLS AVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPG EWLLDLPMLAQDYFSWSRQMTGLLNGQRGEWSAKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRF VLPGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGP QAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVAIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLG LASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAAL EFLIGDKLR
Sequences:
>Translated_489_residues MAWPPHSYSYERFFFWSSEQHRTAMKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLS AVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPG EWLLDLPMLAQDYFSWSRQMTGLLNGQRGEWSAKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRF VLPGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGP QAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVAIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLG LASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAAL EFLIGDKLR >Mature_488_residues AWPPHSYSYERFFFWSSEQHRTAMKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSA VREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGE WLLDLPMLAQDYFSWSRQMTGLLNGQRGEWSAKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFV LPGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQ AFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVAIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGL ASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALE FLIGDKLR
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=465, Percent_Identity=98.9247311827957, Blast_Score=949, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 55630; Mature: 55498
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWPPHSYSYERFFFWSSEQHRTAMKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFI CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHH TAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCC TPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYFSWSRQM CCCCCHHHEEEEEEECCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH TGLLNGQRGEWSAKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRF HHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCE VLPGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF ECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAA HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKADHVAIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIP CCCCCEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCC ALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAAL CCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCEEECCCCCHHCCCCCCCCHHHHHHH EFLIGDKLR HHHHCCCCC >Mature Secondary Structure AWPPHSYSYERFFFWSSEQHRTAMKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFI CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHH TAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCC TPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYFSWSRQM CCCCCHHHEEEEEEECCCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH TGLLNGQRGEWSAKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRF HHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCE VLPGDMAGAPALQFFPWPDVDAWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF ECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAA HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKADHVAIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIP CCCCCEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCC ALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAAL CCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCEEECCCCCHHCCCCCCCCHHHHHHH EFLIGDKLR HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]