| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is ycjQ [H]
Identifier: 91210607
GI number: 91210607
Start: 1494277
End: 1495329
Strand: Direct
Name: ycjQ [H]
Synonym: UTI89_C1584
Alternate gene names: 91210607
Gene position: 1494277-1495329 (Clockwise)
Preceding gene: 91210606
Following gene: 91210608
Centisome position: 29.5
GC content: 55.84
Gene sequence:
>1053_bases ATGAAAAAGTTAGTAGCCACAGCACCGCGTGTTGCTGCGCTGGTTGAGTATGAAGAGCGGGCGATTTTAGCCAATGAAGT GAAGATCCGCGTGCGTTTCGGCGCGCCGAAACACGGGACGGAAGTGGTTGATTTCCGCGCCGCCAGCCCGTTTATTAATG ACGACTTTAATGGCGAATGGCAGATGTTCACCCCGCGTCCGGCAGATGCGCCGCGCGGCATTGAGTTTGGCAAGTTCCAG CTTGGCAACATGGTGGTTGGCGACATTATCGAGTGCGGCAGCGACGTTAACGACTACGCGGTGGGCGACAGCGTATGCGG CTACGGCCCGCTCTCCGAGACGGTCATCATTAACGCAGTGAATAACTACAAGCTGCGCAAAATGCCGCAAGGCAGCTCCT GGAAAAACGCCGTCTGCTACGACCCGGCGCAGTTTGCCATGAGCGGCGTGCGCGATGCCAACGTACGCGTAGGGGATTTT GTGGTGGTGGTAGGGCTTGGCGCGATCGGTCAAATTGCCATCCAACTGGCGAAACGCGCTGGCGCATCGGTGGTAATTGG CGTCGATCCTATCGCCCATCGCTGTGATATTGCCCGTCGCCACGGTGCGGATTTCTGTCTTAACCCCATTGGCGCTGACG TAGGTAAAGAGATCAAAACGCTGACCGGCAAGCAGGGTGCCGATGTGATTATCGAAACCAGTGGCTATGCCGACGCGCTG CAATCGGCACTCCGCGGTCTGGCCTATGGCGGCACCATCTCCTATGTCGCGTTTGCCAAACCGTTTGCCGAAGGTTTTAA CCTCGGACGCGAAGCCCATTTCAATAACGCCAAAATTGTTTTCTCCCGTGCGTGCAGCGAGCCGAACCCGGATTATCCGC GCTGGAGCCGTAAGCGTATTGAAGAAACCTGCTGGGAACTGCTGATGAACGGTTATCTCAATTGCGAAGATTTAATCGAT CCGGTGGTGACCTTTGCCAACAGCCCGGAAAGCTACATGCAGTATGTCGACCAGCATCCGGAACAGAGCATCAAAATGGG CGTCACGTTTTAA
Upstream 100 bases:
>100_bases GGTGATTATGTATGCGCTTTCGGAACATTTTATTAAGAGTGGTTTGACCGCCGGTGGCGTGAAGGGCTAAAGCGGCCAGT TTCTTTACAAGGAGTTTTAC
Downstream 100 bases:
>100_bases TTCAAAGGAATGAAAAGAATGAAAATCGGCACACAGAATCAGGCGTTCTTTCCGGAAAACATTCTGGAGAAATTTCGTTA TATCAAAGAGATGGGTTTCG
Product: zinc-type alcohol dehydrogenase-like protein YcjQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKKLVATAPRVAALVEYEERAILANEVKIRVRFGAPKHGTEVVDFRAASPFINDDFNGEWQMFTPRPADAPRGIEFGKFQ LGNMVVGDIIECGSDVNDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLID PVVTFANSPESYMQYVDQHPEQSIKMGVTF
Sequences:
>Translated_350_residues MKKLVATAPRVAALVEYEERAILANEVKIRVRFGAPKHGTEVVDFRAASPFINDDFNGEWQMFTPRPADAPRGIEFGKFQ LGNMVVGDIIECGSDVNDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLID PVVTFANSPESYMQYVDQHPEQSIKMGVTF >Mature_350_residues MKKLVATAPRVAALVEYEERAILANEVKIRVRFGAPKHGTEVVDFRAASPFINDDFNGEWQMFTPRPADAPRGIEFGKFQ LGNMVVGDIIECGSDVNDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF VVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLID PVVTFANSPESYMQYVDQHPEQSIKMGVTF
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787572, Length=350, Percent_Identity=98.5714285714286, Blast_Score=716, Evalue=0.0, Organism=Caenorhabditis elegans, GI17562876, Length=154, Percent_Identity=32.4675324675325, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323099, Length=138, Percent_Identity=31.8840579710145, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322619, Length=145, Percent_Identity=29.6551724137931, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319955, Length=145, Percent_Identity=29.6551724137931, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF00107 ADH_zinc_N [H]
EC number: NA
Molecular weight: Translated: 38199; Mature: 38199
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVATAPRVAALVEYEERAILANEVKIRVRFGAPKHGTEVVDFRAASPFINDDFNGEW CCCCHHCCCHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCE QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVNDYAVGDSVCGYGPLSETVIINAV EEECCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA CCCEEEECCCCCCCCCCEEECHHHHHHHCCCCCCCEECCEEEEEECCHHHHHHHHHHHHC GASVVIGVDPIAHRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHH QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCC >Mature Secondary Structure MKKLVATAPRVAALVEYEERAILANEVKIRVRFGAPKHGTEVVDFRAASPFINDDFNGEW CCCCHHCCCHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCE QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVNDYAVGDSVCGYGPLSETVIINAV EEECCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA CCCEEEECCCCCCCCCCEEECHHHHHHHCCCCCCCEECCEEEEEECCHHHHHHHHHHHHC GASVVIGVDPIAHRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHH QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]