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The map label for this gene is ompW [H]

Identifier: 91210481

GI number: 91210481

Start: 1387809

End: 1388525

Strand: Direct

Name: ompW [H]

Synonym: UTI89_C1456

Alternate gene names: 91210481

Gene position: 1387809-1388525 (Clockwise)

Preceding gene: 91210476

Following gene: 91210487

Centisome position: 27.4

GC content: 48.54

Gene sequence:

>717_bases
GTGATCTGTGTAGGATCATTTGTTACCCCAATGTGGGTATATTCGTCACGTTTTTATAACCATAACGACGGAGCGGATAT
GAAAAAGTTAACAGTGGCGGCTTTGGCAGTAGCAACTCTTCTCTCTGGCAGTGCCTTTGCACATGAAGCCGGCGAATTTT
TTATGCGTGCAGGTTCTGCAACCGTACGTCCAACAGAAGGTGCTGGTGGTACGTTAGGAAGTTTGGGTGGATTCAGCGTG
ACCAATAACACTCAACTGGGCCTGACGTTTACTTATATGGCGACCGACAACATTGGTGTGGAATTACTGGCAGCAACGCC
GTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCGTTCATCATCTGCCGCCAACACTGATGGCGCAGT
GGTATTTTGGTGATGCCAGCAGCAAATTCCGTCCTTACGTTGGTGCAGGTATTAACTACACCACCTTCTTTGATAATGGA
TTTAACGATCATGGCAAAGAGGCGGGGCTTTCCGATCTCAGTCTGAAAGACTCTTGGGGAGCTGCCGGGCAGGTGGGGGT
TGATTATCTGATTAACCGTGACTGGTTGGTTAACATGTCAGTGTGGTACATGGATATCGATACCACGGCTAAGTACAAAT
CTGGTGTTACTACCGTAAAAGACTCGGTACGACTGGATCCGTGGGTGTTTATGTTCTCCGCAGGATATCGTTTTTAA

Upstream 100 bases:

>100_bases
GCGAAATATATAAAAATTGATTTAAATCACATTAACCAGGATTTTCAATGCAACTTCTAAATTAATCCAGATCAATAAAG
GGTGAATTACCATATGTAAT

Downstream 100 bases:

>100_bases
TTTTCTCTGCAAAACCTCTGCAAAACCCCTCTGCAAAACTGGTCATCAAATGACCAGTTTTTTCCATTCCTTACCGCGTG
CGTCGTTGTAAATATCGGTC

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MICVGSFVTPMWVYSSRFYNHNDGADMKKLTVAALAVATLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSV
TNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNG
FNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF

Sequences:

>Translated_238_residues
MICVGSFVTPMWVYSSRFYNHNDGADMKKLTVAALAVATLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSV
TNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNG
FNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF
>Mature_238_residues
MICVGSFVTPMWVYSSRFYNHNDGADMKKLTVAALAVATLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSV
TNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNG
FNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF

Specific function: Acts as a receptor for colicin S4 [H]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=96.2264150943396, Blast_Score=414, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 25872; Mature: 25872

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICVGSFVTPMWVYSSRFYNHNDGADMKKLTVAALAVATLLSGSAFAHEAGEFFMRAGSA
CEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDI
EECCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCCE
ATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWG
EEEECCCHHHEEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCC
AAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF
CCCCCCEEEEECCCEEEEEEEEEEEECCCCHHHCCCEEECCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MICVGSFVTPMWVYSSRFYNHNDGADMKKLTVAALAVATLLSGSAFAHEAGEFFMRAGSA
CEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDI
EECCCCCCCCCCCCCCCEEECCCCEEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCCE
ATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWG
EEEECCCHHHEEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCC
AAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF
CCCCCCEEEEECCCEEEEEEEEEEEECCCCHHHCCCEEECCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 9629924; 10348872 [H]