Click here to switch to the map view.

The map label for this gene is ypjA [H]

Identifier: 91210384

GI number: 91210384

Start: 1297012

End: 1297338

Strand: Direct

Name: ypjA [H]

Synonym: UTI89_C1357

Alternate gene names: 91210384

Gene position: 1297012-1297338 (Clockwise)

Preceding gene: 91210380

Following gene: 91210385

Centisome position: 25.6

GC content: 50.15

Gene sequence:

>327_bases
ATGGAATCGAAATCAGTCGATACCCGCAGTATATATCGTGAACTGGGCGCAACGCTGAGTTACAACATGCGTCTGGGGAA
CGGTATGGAAATTGAACCCTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAATCGAGTGAAAGTGAATAGTG
ACGGTAATTTTATCAATGATTTGTCGGGTAGACGTGGAATATACCAGGCAGGTATTAAAGCCTCATTCAGCAGTACGTTA
AGCGGGCATCTCGGGGTGGGGTATAGCCGTGGTGCCGGTGTGGAGTCCCCGTGGAATGCGGTGGTCGGTGTGAACTGGTC
GTTCTGA

Upstream 100 bases:

>100_bases
TGCGCTGTCTCTTCAGGATGAATCCCCTGGTCTGGTTCCTGCGGGCTGATGTTGCAGCAGAGCTAAGGTCACTTAGACGC
TACTATCATTTATCCAATGC

Downstream 100 bases:

>100_bases
CCATCAACGATTAAACTGCGTTTCGGCGCTGTTTTTGTTTACCGGGTGCTAAAAGGGAAAATTCTGGGGCAAAAAAAAGC
CCGTCAGTTACGGCGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MESKSVDTRSIYRELGATLSYNMRLGNGMEIEPWLKAAVRKEFVDDNRVKVNSDGNFINDLSGRRGIYQAGIKASFSSTL
SGHLGVGYSRGAGVESPWNAVVGVNWSF

Sequences:

>Translated_108_residues
MESKSVDTRSIYRELGATLSYNMRLGNGMEIEPWLKAAVRKEFVDDNRVKVNSDGNFINDLSGRRGIYQAGIKASFSSTL
SGHLGVGYSRGAGVESPWNAVVGVNWSF
>Mature_108_residues
MESKSVDTRSIYRELGATLSYNMRLGNGMEIEPWLKAAVRKEFVDDNRVKVNSDGNFINDLSGRRGIYQAGIKASFSSTL
SGHLGVGYSRGAGVESPWNAVVGVNWSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082145, Length=108, Percent_Identity=93.5185185185185, Blast_Score=215, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 11848; Mature: 11848

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKSVDTRSIYRELGATLSYNMRLGNGMEIEPWLKAAVRKEFVDDNRVKVNSDGNFIND
CCCCCCHHHHHHHHHCCCEEEEEECCCCCEECHHHHHHHHHHHCCCCCEEECCCCCEECC
LSGRRGIYQAGIKASFSSTLSGHLGVGYSRGAGVESPWNAVVGVNWSF
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MESKSVDTRSIYRELGATLSYNMRLGNGMEIEPWLKAAVRKEFVDDNRVKVNSDGNFIND
CCCCCCHHHHHHHHHCCCEEEEEECCCCCEECHHHHHHHHHHHCCCCCEEECCCCCEECC
LSGRRGIYQAGIKASFSSTLSGHLGVGYSRGAGVESPWNAVVGVNWSF
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]