| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is flgE [H]
Identifier: 91210228
GI number: 91210228
Start: 1177542
End: 1178747
Strand: Direct
Name: flgE [H]
Synonym: UTI89_C1201
Alternate gene names: 91210228
Gene position: 1177542-1178747 (Clockwise)
Preceding gene: 91210227
Following gene: 91210229
Centisome position: 23.25
GC content: 51.33
Gene sequence:
>1206_bases ATGGCCTTTTCTCAAGCGGTTAGCGGATTAAACGCTGCCGCCACCAACCTCGATGTTATTGGCAACAATATCGCCAACTC CGCCACCTACGGCTTTAAATCAGGCACGGCCTCTTTTGCCGATATGTTTGCCGGTTCGAAAGTGGGACTGGGGGTAAAAG TTGCCGGTATCACCCAGGACTTTACCGATGGCACGACCACCAACACCGGGCGAGGTCTGGACGTTGCTATCAGCCAGAAC GGTTTTTTCCGTCTGGTAGACAGCAACGGTTCGGTGTTCTACAGCCGTAATGGACAATTTAAGCTGGATGAAAACCGTAA CCTGGTGAATATGCAAGGTTTACAGCTGACGGGGTACCCGGCAACCGGTACGCCGCCGACTATTCAGCAAGGGGCGAATC CGACCAATATTTCGATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCGTCAATGCAGATCAACCTGAATTCC AGTGATTCGCTTCCCTCTGTTAACGCATTTGATGCCAGCAATGCGGATAGCTATAACAAAAAAGGTTCGGTGACTGTTTT CGATAGTCAGGGTAATGCTCATGATATGAGCGTGTACTTTGTGAAGACCGGGGATAATAACTGGCAGGTCTACACCCAGG ATAGTAGTGATCCAAACAGCATTGCGAAGACAGCGACAACACTGGTGTTTAATGCCAATGGCGTTCTGACCTCAAATCCA ACAGCGAATATTTCCACTGGCGCAATTAACGGCGCAGATCCCGCCACGTTTAGCCTGAGCTTCCTCAACTCCATGCAGCA AAATACCGGCGCTAACAACATTGTGGCAACCACCCAGAACGGCTACAAACCGGGCGATCTGGTGAGTTATCAAATCAATG ATGACGGTACGGTTGTCGGCAACTATTCCAACGAACAAACCCAACTGCTGGGGCAGATTGTACTGGCGAACTTTGCCAAC AACGAAGGTCTGGCATCCGAAGGCGACAACGTCTGGTCCGCTACGCAATCTTCTGGCGTGGCGCTGTTGGGGACAGCCGG GACGGGCAACTTTGGCACACTGACCAACGGTGCGCTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGA TCGTTGCCCAGCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAATACGCTGGTTAACTTA CGCTAA
Upstream 100 bases:
>100_bases CGGCAACAACGGTAATACGCTGGATCTCGGCACTTACGGCACCACCACCCTCGACGAAGTACGGCAGATAATTTAAGCCT TCACATTTCAGGAGTCAGTC
Downstream 100 bases:
>100_bases TCGCTGACGGGATAGCTCAATGGATCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACGCTGAATCAACAGGCGG TAACCGCCAGTAATCTGGCC
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQN GFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS SDSLPSVNAFDASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLVFNANGVLTSNP TANISTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL R
Sequences:
>Translated_401_residues MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQN GFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNS SDSLPSVNAFDASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLVFNANGVLTSNP TANISTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFAN NEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNL R >Mature_400_residues AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNG FFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSS DSLPSVNAFDASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLVFNANGVLTSNPT ANISTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANN EGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=402, Percent_Identity=96.2686567164179, Blast_Score=761, Evalue=0.0, Organism=Escherichia coli, GI1787318, Length=138, Percent_Identity=34.7826086956522, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 41919; Mature: 41788
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD CCHHHHHCCCCHHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCC FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP CCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCEEECCCCCEEEECCEEEECCC ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNADSYNK CCCCCCHHHCCCCCCEEECCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLVFNANGVLTSNP CCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHEEEEEEEECCCEEECCC TANISTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG CCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEE NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE CCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEE ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR CCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCC >Mature Secondary Structure AFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD CHHHHHCCCCHHHCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCC FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP CCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCEEECCCCCEEEECCEEEECCC ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNADSYNK CCCCCCHHHCCCCCCEEECCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLVFNANGVLTSNP CCCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHEEEEEEEECCCEEECCC TANISTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG CCCEECCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEE NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE CCCCHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCEEE ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR CCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]