| Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
|---|---|
| Accession | NC_007941 |
| Length | 114,230 |
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The map label for this gene is ybjZ [C]
Identifier: 91206259
GI number: 91206259
Start: 11319
End: 12449
Strand: Direct
Name: ybjZ [C]
Synonym: UTI89_P014
Alternate gene names: 91206259
Gene position: 11319-12449 (Clockwise)
Preceding gene: 91206258
Following gene: 91206260
Centisome position: 9.91
GC content: 58.44
Gene sequence:
>1131_bases ATGGCCGCTAAACGTACCATGCTCTGGCTGCTGGTGTGGCGGGCGCTGCGTCTGCGTTTTCAGCGGGTCAGCGTGGTGTT TGCCGCGCTGATGGTGGGGGCGACCATCGTGACGGCGCTTTTTGCCGTCTGGTTCGACATTAACACCAAAATGAGCGAAG AACTGCGCACCTTCGGCGCGAATTTTTACATCGGGCCGGGGCACGGTTCCAGTATGCCGCAGCAGGAGTTGCAGAGCATT CTCGATCAGGCGCCGCAGGGGCTGGTGCATGGCGCCAGTCCGTGGTTGTACGGCATGGCGCGTACCGAGCTGGAAAAAGT GGTGATGGTTGGCGTGTGGTTCGAGTCGCTGCAAAAACTGGTGCCGTACTGGCAGGTCACCGGTAGCTGGATTGGCGTTA GTTTTGACGACCGTAATGCGATGATCGGCGTCAAACTGGCGGAACGCCTCAACGTGCAGCCGGGCGACAGCATCACGCTG GTGGATCACAATCAGCGTAAGAATTTGCAGATTAAAGGCATTGTGGAGTCTGGCGATGCGACGGACAACATGCTGATCGT CAGCCTCGACGTGGCGCAGGCCTGGCTGCATCAGCCGGGCAAAATCAGCCACGGCTTGCTGAGCGTCAGTAACGATGTCG GCCAGGTGGAGAACTATGCCAGCCGGTTGCAGGCGCAGTATCCTGACCTGGAGATTCGTCCGGTGCGTAAGGTCTCTGCT TCCGAAGGGCAGGTGCTGGATAAAATTAAAGGTCTGATGGGACTGGTCTCGATCGTGATTCTGGCGCTCTCTTCGCTGTG CGTGAATACCACGCTGATGGCGATTGTCGGCGAGCGGGCGCGCGAGTTTGCGCTGCAAAAAGCGCTTGGTTCCAGCAACG GCGATATCGTGCGGCAAATTCTGCTGGAAACCAGCATCATCGCGCTGGCGGCGGTGGCGTGCGGCTGGGTGCTGGGATAT TTGCTGGCGCAACTGTTGGGATTAACGGTGTTTAATGCCGCCATTTCACTGCGTCTGCCGGTGTTGCCCATTACTCTGGT GTTGTCTTTACTGGTCGCCATTCTGGCGGCGATTGTTCCGGTGCGACGCGCGGTAAGCGTCGAGCCTGCTAAAGTGCTGA AAGGAGAGTAG
Upstream 100 bases:
>100_bases GTGGTGCCGTGCGTACTGGTGATTGCGGTACTGATTGCGTTGATCGGCACCTGGTTCCCGGCCCGGCGGATTGCCCGGCT GTATCCTGTGGAGGTGCTGT
Downstream 100 bases:
>100_bases CGCCATGTCCGTTACGCATATCCCTCAGGTGGCGATCGAAACCCGCCACTTATACAAACGGTTCGGTGACGTTACCGCCC TGGATGACATTAATCTGCGC
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MAAKRTMLWLLVWRALRLRFQRVSVVFAALMVGATIVTALFAVWFDINTKMSEELRTFGANFYIGPGHGSSMPQQELQSI LDQAPQGLVHGASPWLYGMARTELEKVVMVGVWFESLQKLVPYWQVTGSWIGVSFDDRNAMIGVKLAERLNVQPGDSITL VDHNQRKNLQIKGIVESGDATDNMLIVSLDVAQAWLHQPGKISHGLLSVSNDVGQVENYASRLQAQYPDLEIRPVRKVSA SEGQVLDKIKGLMGLVSIVILALSSLCVNTTLMAIVGERAREFALQKALGSSNGDIVRQILLETSIIALAAVACGWVLGY LLAQLLGLTVFNAAISLRLPVLPITLVLSLLVAILAAIVPVRRAVSVEPAKVLKGE
Sequences:
>Translated_376_residues MAAKRTMLWLLVWRALRLRFQRVSVVFAALMVGATIVTALFAVWFDINTKMSEELRTFGANFYIGPGHGSSMPQQELQSI LDQAPQGLVHGASPWLYGMARTELEKVVMVGVWFESLQKLVPYWQVTGSWIGVSFDDRNAMIGVKLAERLNVQPGDSITL VDHNQRKNLQIKGIVESGDATDNMLIVSLDVAQAWLHQPGKISHGLLSVSNDVGQVENYASRLQAQYPDLEIRPVRKVSA SEGQVLDKIKGLMGLVSIVILALSSLCVNTTLMAIVGERAREFALQKALGSSNGDIVRQILLETSIIALAAVACGWVLGY LLAQLLGLTVFNAAISLRLPVLPITLVLSLLVAILAAIVPVRRAVSVEPAKVLKGE >Mature_375_residues AAKRTMLWLLVWRALRLRFQRVSVVFAALMVGATIVTALFAVWFDINTKMSEELRTFGANFYIGPGHGSSMPQQELQSIL DQAPQGLVHGASPWLYGMARTELEKVVMVGVWFESLQKLVPYWQVTGSWIGVSFDDRNAMIGVKLAERLNVQPGDSITLV DHNQRKNLQIKGIVESGDATDNMLIVSLDVAQAWLHQPGKISHGLLSVSNDVGQVENYASRLQAQYPDLEIRPVRKVSAS EGQVLDKIKGLMGLVSIVILALSSLCVNTTLMAIVGERAREFALQKALGSSNGDIVRQILLETSIIALAAVACGWVLGYL LAQLLGLTVFNAAISLRLPVLPITLVLSLLVAILAAIVPVRRAVSVEPAKVLKGE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 40969; Mature: 40838
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKRTMLWLLVWRALRLRFQRVSVVFAALMVGATIVTALFAVWFDINTKMSEELRTFGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC NFYIGPGHGSSMPQQELQSILDQAPQGLVHGASPWLYGMARTELEKVVMVGVWFESLQKL CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VPYWQVTGSWIGVSFDDRNAMIGVKLAERLNVQPGDSITLVDHNQRKNLQIKGIVESGDA CCHHEECCCEEEEEECCCCCEEHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCCC TDNMLIVSLDVAQAWLHQPGKISHGLLSVSNDVGQVENYASRLQAQYPDLEIRPVRKVSA CCCEEEEEEHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCC SEGQVLDKIKGLMGLVSIVILALSSLCVNTTLMAIVGERAREFALQKALGSSNGDIVRQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LLETSIIALAAVACGWVLGYLLAQLLGLTVFNAAISLRLPVLPITLVLSLLVAILAAIVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VRRAVSVEPAKVLKGE HHHHCCCCCHHHCCCC >Mature Secondary Structure AAKRTMLWLLVWRALRLRFQRVSVVFAALMVGATIVTALFAVWFDINTKMSEELRTFGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC NFYIGPGHGSSMPQQELQSILDQAPQGLVHGASPWLYGMARTELEKVVMVGVWFESLQKL CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VPYWQVTGSWIGVSFDDRNAMIGVKLAERLNVQPGDSITLVDHNQRKNLQIKGIVESGDA CCHHEECCCEEEEEECCCCCEEHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEECCCC TDNMLIVSLDVAQAWLHQPGKISHGLLSVSNDVGQVENYASRLQAQYPDLEIRPVRKVSA CCCEEEEEEHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCC SEGQVLDKIKGLMGLVSIVILALSSLCVNTTLMAIVGERAREFALQKALGSSNGDIVRQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LLETSIIALAAVACGWVLGYLLAQLLGLTVFNAAISLRLPVLPITLVLSLLVAILAAIVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VRRAVSVEPAKVLKGE HHHHCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]