| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90023430
GI number:
Start: 4787218
End: 4789368
Strand: Direct
Name: Not Available
Synonym: Sde_3790
Alternate gene names: NA
Gene position: NA
Preceding gene: 90023429
Following gene: 90023436
Centisome position: NA
GC content: NA
Gene sequence:
>2151_bases ATGATCGGAATAACAGGCCGTACACTCCCACCACACCGTATACCTAAGGGCATACTGCTCTCCCTGTTTATTGGTGCATT CAGCCAAACCGCCTACACAAGCGAAAACGACCCACTATTTGAGCTAAGCCTAGAAGAATTACTCCAAATTAAAGTGGTTA CTGCAGCTTCGGGCTACGAACAAAAGCTTGCGGACGCGCCAGGCTCGGTGACGGTGATTACCAAGCACGAATGGCAAGCC GCCGGCGCCCGCGCGCTAGAAGACGTTTTGGATATGGTACCCGGTGTGCACATAAGCAAAACGACAACAGGCTTAGTTGC AAACAAAGCTGTCATACGCGGTATTTCTGGCACATTTGGCCAACAGGTACTCGTATTAATAGATGGCGTACCCATTAAAT ACCGCCAAGATTCAGGCCAAACCGTCGGCAGCCGTATAGCCCTAGCCGGCTTTGAGCGTGTTGAAGTTGTGCGCAGCCCT GGCTCGGCCATTTATGGCGCTGATGCTGTGGGCGGTGTAATCAACCTTGTGTCAAATAAACAATTAGATAACACCCTTAC CCTGCGCACGGGTGAATACAACACACACGACATAGAGTGGACGCACCAACACAACTTTGAAGAAGGCGTATGGCGTATCA CAGCAGCACACCAACGCAGTGATGACGACCCCGATAAAATCGCCACAGACGATTTGCAAACTGTGTTTGATAATATATTC GGTACCGATGCCAGCCAGGCACCGGGAAGAGTAGATGAACGCTACGCAATAGATCAAATTAACGCACAGCTAGATTGGCA TAAGTTAAGTTTACAAGTTCACTACTGGAACAATAGCGACAAGGGGGTGGGAAGTGGCGTTGCAGCAGCCTTAGATAACA AAGGTACCGCCAGCCTAACCGATACCCAATTTAATGCCAGTTATAACCTGTATAACGATGCACAGCAATCGCTAGCGTTT AACGGCGCCTACAACAAACAGCAATCGCGCACATTCTTATATGTTTTTCCTGCGGGCACTCAATTGCCCATAGGCGCAGA TGGCAATATTGATTTTAACGAGCCGGTTAACGTTGTTACATTTACCGATGGCTATATAGGCACCCCAGGCAACAATGCTA GCGCTACCGATGTAAACGCCACTTATCTTGTACACTTAGGCAAACACGATACCCGTGTTCAGATTGGCTACCAAACACAA TCCTACAAAGCCGTAGAGCGCAAAAATTTCGGCCCCAGCATTATAGATGGCAGCCAAACCGTGGTAGACGGAACGCTGAC TGATGTGAGCAATACACCTTACGTTTATATTCCACCATCTGATCGAGATTTAACATACCTATCGATTGAAGATACTTGGC AAATTAGTAGTGACTTTCGCGCCTCTCTTGGCATGCGCTACGACCAGTATTCCGACGTTGGCAGCACCTTTAACCCGCGT ATAAATTTGCAATGGCAAGCATCAAAAAATATTACATTTAACACCTATGGCGGCACCGCCTTTAGAGCGCCATCGTTTAC AGAGTTGTACGCGCAAAACAACCCAGCAGGCGTAGGTAACCCCAGCTTAAAGCCCGAAAAAGCGCGCACTTTTCAAAGCG GTATTAACAGCACTATACGCTTCAATAAATCGACTGATGTAACCGTTAATATTTACCAATACAAAATAAACAATATTATT GAATTTGTAAGCCAAGCAGAAAGCGGCATTCAACTGGCCAGCAATACCGGTGAACAGGCCGGTTGGGGTTCAGAGTTAAT CGCCAATTGGCAATTTGATAAAAAATTGCTCATTAAAGGCCATTACAGCTACTTAGATGCGCGTGATAAATTCGATAACC GTTTATCCGATGTCCCGGTACATACCTTTTATATTCAAGGCCACTATAAACTCGCAACCCACTGGCAGCTATTTGCGAAA AGTAAATGGCTATCTGAACGCTCGCGTAAACCTGGCGACCCACGCGAAGCGCTAGAAGGCTACAACATAACGTCGTTAAA TCTTGCTTGGGCACAATCACGCTATAGCGCTGCCTTGAGCATAAGCAACGCTTTTGACACAGACGCTCGCGAGCCAAGTA CAGGCAGCCTGCCAGATGATTACCCATTATCTGGTAGGCATGCAATGCTTTCTGTTAGCTATAGCTATTGA
Upstream 100 bases:
>100_bases TCGGGCTTTTTTGTGTTTCCAATCTAACTTAAAGTGCTAAGCTTAGGAGTAGCCGAAATAAAATCACTCTGATTTTAAAT ATATAAGAAATAAGCTCAAT
Downstream 100 bases:
>100_bases GGCTTTTCGCACTGAGGTTATTTCGGTCTTGTAGCACACCGGGCATACACAATTGCGCAGCGGTATTGAGAGCACCTAAT GTGTATTAAGCCACCAAACG
Product: ferrienterochelin/colicin outer membrane receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>716_residues MIGITGRTLPPHRIPKGILLSLFIGAFSQTAYTSENDPLFELSLEELLQIKVVTAASGYEQKLADAPGSVTVITKHEWQA AGARALEDVLDMVPGVHISKTTTGLVANKAVIRGISGTFGQQVLVLIDGVPIKYRQDSGQTVGSRIALAGFERVEVVRSP GSAIYGADAVGGVINLVSNKQLDNTLTLRTGEYNTHDIEWTHQHNFEEGVWRITAAHQRSDDDPDKIATDDLQTVFDNIF GTDASQAPGRVDERYAIDQINAQLDWHKLSLQVHYWNNSDKGVGSGVAAALDNKGTASLTDTQFNASYNLYNDAQQSLAF NGAYNKQQSRTFLYVFPAGTQLPIGADGNIDFNEPVNVVTFTDGYIGTPGNNASATDVNATYLVHLGKHDTRVQIGYQTQ SYKAVERKNFGPSIIDGSQTVVDGTLTDVSNTPYVYIPPSDRDLTYLSIEDTWQISSDFRASLGMRYDQYSDVGSTFNPR INLQWQASKNITFNTYGGTAFRAPSFTELYAQNNPAGVGNPSLKPEKARTFQSGINSTIRFNKSTDVTVNIYQYKINNII EFVSQAESGIQLASNTGEQAGWGSELIANWQFDKKLLIKGHYSYLDARDKFDNRLSDVPVHTFYIQGHYKLATHWQLFAK SKWLSERSRKPGDPREALEGYNITSLNLAWAQSRYSAALSISNAFDTDAREPSTGSLPDDYPLSGRHAMLSVSYSY
Sequences:
NA
Specific function: NA
COG id: COG4771
COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA