Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90023269

GI number:

Start: 4601147

End: 4608157

Strand: Reverse

Name: Not Available

Synonym: Sde_3629

Alternate gene names: NA

Gene position: NA

Preceding gene: 90023270

Following gene: 90023268

Centisome position: NA

GC content: NA

Gene sequence:

>7011_bases
ATGGGAGATAAACGAAATTTCGCAGCGTTAGAATGGGTTATTGGAGAAATCTCCGATACCCTTAAAGACGCTCGACAAGC
GCTTGAAGCCTACGTCGAAGATCCAAAAGATTCGACGCGGATGCGCTTTTGCCTGACCCATATTCACCAAGTGCATGGCA
GCTTGCAGATGGTGGAGTTTCACGGCGCCTCACTGTTAGCCGAGGAAATGGAGCACACTGCACAGGCCATTATTAATAAC
GATGTAGCCAGCGCCCCTGAAGCACAAGAAGTGCTTATGCGCTCTATGTTGCAGCTTCCTATTTATCTCGATCACGTAAA
AATACACAAAGAAGATCACCCAGGTGTTGTGCTGCCTTTGCTGAACGATCTTCGCGCGGTGCGCAAACAAAGCTTCTTAA
GCGAGACCAACTTATTCTCGCCAGATATGAGCGCCGCCGAGCGCAAATCTGTAAAACCGCACCCTGTTACTCAAGATGCA
GCCAAGCTTACTCAAGTGCTTAAAAAACTGCGGGAAATGTACCAGTTTTCTGCAGCCAGTGTATTGCGCGGCATAAAAAT
AGACGAAAACCTCACTTACATAGATAAAGTGATGGGCCGTTTAGAGTTGTTAACTCGCGGCACAACCTGTCACGCAACGT
GGGATATTTCCGCTGCGCTAGTGGATGCGCTGCGTCGCGACGATTTAGAGCTAAGCGTTGCTGTGCGCGGCCTATTGCGC
TTTTTGGCGCGAGAGCTGCGTATTTTAGGTGAAAAAGCGCCGCAATCTTTAGCGCGCAAGCCACCGGTTAACCTACTTAA
AAATTTACTTTACTACGTTGGCAAAGCCGACGCAGGCAGCGAGCGCGTTGCGCGCATTCGCGCAGAATATAAATTAGATA
CCGCCGAATTCGACTCGGGTTATGGCGGCGTGCGCAGCGACGGCGATGGCTTAAATGCGCCAGACCCAGAAGCCATCCGC
TCGGTTGTGGTTGCACTGCAAGAAGAACTTAACACCGTAAAACATATCCTCGATATCTGCCTCACCGGTCAAGGTAACCC
AGAAGGTTTGGCCGAAGTATTGCCCGTTGTTAAACGCGTTGGCGATACGCTTGCAGTATTAGGCATTGGCGATTTACGCA
AGCAAATAGTCGAGCAGGCTGATGTGCTCGAAAAAATGTCTCAGCAAAACAGCTTAGACGAAGACGAATTAATGCAAGTT
GCCACTCGCGTAATAGATGTAGAGCACAAGCTCGATGCTATTTCGAAAGTGGTGGGCAAAAGCCGTGATATTAACGATAT
CAACGAGCGCGAAATCGAAATCGACCAAGCTAAGGCAACCGTTATTAACGAGTGTCGCCACGGCTTAGAAAAAGCGAAAG
ACGCAATTGTCGAATACATCTCGTCTAAGTGGGATGTAGCCCAGCTCGAAAATATTGGTGGCTTGCTACACGATATTCGC
GGCGGCTTAGATATGATTCCTCTGCCGCGCCCAGCAGCAATCATGGATGCCTGTAATCGTTACATCCAAGAAGCACTGTT
AAGCGGCGAAACACAACCTAGCTGGAAAGCGCTTGATGCACTGGCCGACGCTATGGCGAGTGTGGAGTTTTATCTCGAGC
GCTTATCGGTAGATTTAGACGGCGATGCCGATCAATTTTTAGATATAGCAGAAGAAAGTGTTGCATCACTTGGCTTTGCT
GTAACGTCACGCCCTGTAGTGCCATCTCAAGTTATCGAAACTGAAACGCCTGTTGCCGAAGGTAGCTTTGCGGCCGATAC
GCAGGCAGACGCAGTGCGAGATCAGAGCGGGCAAGAAGCAAGTTCGCAAGCAGAGAGCGCGCAGCAAGAACAGCCTGCAG
AAAGCTTCGACCAAGGCGCAGAAGCTGCTTATGAAGCACAAGAGCCTGAAGACAACACCTTAGACTCTGCATTTGCCAAC
CTGCCACAGGTCGAAATAGACGAGCCGCAAGAGTCTGTTGAAAACGAAGCTAGCGATGTAAGTGCCGTAAGCGACGAAAG
CACAGCAGACTATAGCGAGCAACCAAGCAGCGATAATGCCTTTGGCCAACAAGATACCGCTAGCTACGAAGCGCCTCAAA
CCGAGCCGGCAGGCGCGAGTGTAGAAGAGCAGCAACCTGCACAAGACCCAGCGGATGCGCCAATTTCATTAGATATGATC
TCTGTAGACGACGAGCCTGTCGCCGAAGAAGAGAGTGACATCGATGAAGAAATTATCGAAATTTTTATCGAAGAAGCGGG
CGAAGTTTTAGAAACATTAGAAGAGTACTTCCCCAAGTGGCGTGCCGACCCTACCGATAACGACTCACTGGTTATTGTTC
GCCGTGCCTTCCACACCCTCAAGGGCAGTGGTCGCATGGTAGAAGCCTACGATGTAGGTGAATTGGCTTGGTCGGTAGAA
AATATGCTTAACCGCATTATCGACAAAACCGTTCCCTATACTGCAGCGCACGGCAATTTTATTCAGCTGGTGCTCGAGCT
AACACCAACGCTGGTAGAAGCATTTAAAAACCGCACCGCCAACCCACAAAAAGCGCTTACCGAAACCTATATGGGGTACG
GGGCAGCCTTAGCCGAGGGGAGTATCCCCGACGAGGTAAAGGAGTTAGCGGGTAGCGACGCTGCGACAGATAGCGCAGCG
CAAGAAGAGCATGCGCAACAGGAAACCGAGGCGCCACCTGCTTACTATGTTGAAGAAGATGAAGACGACGATGAAGACGA
TCGCGTATTAAAAGAAATTTTTTCTTCTGAAGCACGCTCGCATCTAGCCACTATTCAACAGTTTGTGGACGAAATGGAAG
CTGCGGCACCCATTTATACTCCACCTACCGATAGCCTACAGCGCGCACTGCACACCTTAAAAGGCAGTGCCAAAATGGCG
CAGGTAACGCTTATTGCAGAAATGGCTGAGCCTTTAGAAAACTTTGCTAAAGAGCTTATTACCTATCAAGTACCTATTAC
CGACGATATTTTACAGCTGATAAAAGATGCCGGCTCTTACACCGCGGGCGCAATCGAAGCGGTTGAAAATGGTCGTGAAA
TAGAAGTTTCTAAATTGCCGCAGTTCCTTGCGCGTGCGTTTGAGTTGCGCGAGATGGCTGTGGGACATTTAATTCGCCTT
AAAGAAATGGAGAAGCAAGGGGTAAACAAAGTAGACCCACGCTTGCTATCTATTTTTATGGCCGAAGAAATGACTCTGCT
TTTAGAAGCTGATCAACTATTGGCGCAATGGCAAAGCAACCCAGGTGAACTCGAGCGCATCGACGATGTTATTCGCGAGC
TAACCACCCTAGAGCAGGGCGCGCAGCAAGCCAACCTGCCAGATATGGCCAGCTTAAGCCAGCGCTTAAGCACTGTGCAC
GGCCATATTAAACAAAACAATTTACAGTTAGATGAAGGCTTTTTCGAAACCTTATTAGCCGGGCACAATGCCCTACTCGA
TATGGTAGATGCAGTTGCCGCTGGCCAAAATATGGTGCCGCCGCAAGAATATGTTGTGGCTGCTATAGAAAGTCTTATTC
ACAGCGCCGAAGCTAATGCTGCAACTAGAGCTGACGCACCACAGTTTGATACTGAACAAGCCGACGAATTTGGCAGCGAA
GAAATTATCATCGAAGATTTCTCTGAGCTAAATGAGCTGGAAAGCGAAACAGAAGCCGAACAACAAAGCGAACTTCAGGG
CGAGCAAGCGGAACAACTAAACCCGCAAGATTTAAGCGAGCCTACCAGTGAAGAAGCATTCAGCTTTGGCGAAGCGGCAG
CTGACGCGAGCAACGAAAGCTTCGACCTGGGTGAGCAAACAAGCGAGACCGTTGAGTTCGACAATGCGCAAGAAGAAGCA
CCTACTGCGGCTGATCAATCAGATACGCTTGCATTTGCAATCGATGCTGAAGATGCAGATGAAATTAGTGCAGGTGACGA
CGACTACCTCGATCTTGTTGTCGAGCCTCTGCTCATAGACGAAGAAGACTCCAACGACTTAGAAATTAATTTTGATGAAG
AGTCATCAGAAGAAATTTCTTTAGAAGATGAAAGTACGTTTGAAGACAACGCTTTTGATAACGTTACAGAATCTCCTACA
GAGCAAGCAGAAGAAACCTTTGGTTCGCTCGACAATGCTTTTGATGCGCCCACTGCAGACGAAACATTTGCCACCCAAGA
ATTAACCGACGAGCATCAATTGGCCGGTGAACTGGGTGAGCATATTGATGTTGTTGAGGTTGAAGGTTTAGGTGAGCCCG
CAAGCGAGGCGGAGCAAACAGACACCGTTGACTTTGAATTGCCGCACGGCGAAGAAGCCGAGTTCAAATCAGACGTTGCC
GCCGAAGCGAGCGAACAGACACAAGCTGAAGAATGCTCTGATTCTAATGATTCAGATAGTAGTGGTTCAGATGTTAGCGA
TTCAGAATTTAATGAATCTGATTTTGATGAATTACCAGAGCCGCCACTCGAACCGCAGGAGCCAGTAGCACCTGTAGCTG
CAGAGTCTACTCAGCCGTCGCACCCTGTTGCCGAAGGTATGGCAACAATTGATGGCTTGCTCGATAGCATTGATATACAA
GACCCAGACTACGATGAGGATATTGTCGAAGTATTCCTAGAAGAGGCCGATGAGCTTTGTGAAGAGCTAGACGAAGCCAT
TCACACCTGGGAATCCGACTGGTCGAATGCCGAGCCTTCAGAAATTATTAAACGTGCCCTGCACACCCTGAAAGGTGGTG
CGCGTTTGTCTGGCATGAATAATTTAGGTGAGCTTACCCACGAATACGAAAGCTACATAATCGGTACCGATTTCGATTCT
ACCGATGAAGCTTTCTTCGCACAGTTACACAGCTACCAAGATAAAGTACTGCGTGGCGTGCGTGCGTTGCACCAATTTAT
GCGCGGCGATGCAGCGCAGGTGGTGGCATCCGAAGAGCCAACCTTAGGTGATGTAGAGCTAGTCGAAGAAGACGAAGCTG
GTATCGCCATGGTGAAACAGGCGCAAACAAGTGAAGCACCTGCTACCAACGACGGCGAGCCGGGCAGCAGTAATGTTGTA
CCTTTTGCACCAAAAACTAAAGATGAATCGGGCTTTATTCCAACCAGACCCAAAGAAGAAGATTCTGGTTTTGTAATGCC
TCACGCGAGCGGTGGTGCACAAGCTGCGCCGCAGGTTGCAATGAAACGCAGCGGGCCGCAAGAAGTTGTAAAAGTACCTG
CAGACCTACTTGAAGAACTGGTAAACCTCGCAGGTGAGACTTCGATTAGCCGCGGCCGACTAGAGCAACAGGTAAACGAC
TTTGGTGGTGCACTCGAAGAAATCGACGGTACTATTCACCGCTTGCAAGAACAGCTGCGCCGTTTAGATATTGAAACAGA
AGCGCAAATTATTTTCCGGCAGGAGCAGATTGCAGAATCTGATCGCAACTTCGATCCGCTGGAAATGGACCGCTATTCAC
AATTGCAGCAGTTGTCGCGATCGCTTATCGAATCCGCTTCGGATTTGGCCGATTTGCGCTCAACGCTTACCGACAAAGTG
CGCGATACAGAAACCCTATTGCTGCAACAGTCGCGTATTAACTCAACACTACAAGAAGGCCTCATGCGCTCACGCATGGT
GCCATTCTCGCGCCTTGTACCGCGCTTGCGCCGTATTGTGCGTCAAGTATCTAGCGAATTAGGTAAGAGTGTTACCTTCG
AGTTAGACAACATAGAAGGTGAATTGGATCGGTCTGTATTGGAGCGCATGGTAGCGCCGCTAGAGCACATGTTGCGCAAC
GCGGTGGACCATGGTATTGAAATGCCAGATGTACGCGCGAATGCTGGTAAATCTGAAACCGGCCGCATTGTACTTACCCT
TGGCCGCGAAGGGGGCGATGTAACCCTGCGCTTGGCCGATGATGGCCGCGGTATCGATTTAAAACGCGTGCGTGAAAAAG
CGATTGAGCGCGGCTTAATGGTGGATGATGCCACCCTAAGTGATCGCGATATTATGCAGTTTATTTTGCATGCTGGTTTC
AGTACTGCAGAAAGCGTGACCCAAATTTCTGGTCGCGGTGTGGGCATGGATGTTGTTCACGCAGAAATTAAACAGCTGGG
TGGTTCGGTTTCTATTAACTCCGAATGGGGTAAGGGTACCGAGTTCCTTGTGCGCTTGCCATTTACCGTATCGGTAAACC
GCGCATTAATGGTTGCCTTGGGGTCGGATTACTTTGCCGTACCACTTAACAATATTGAAGGTATTGTGCGTGTAAGCCCA
TTCGAGCTAGAGCACTATTACCAAAACCCCGAAGCGCGTTTCGAATACGCCGGCGAAAATTACCAAGTGCGTTACTTGGG
CAGCATGTTAATTGATGGCATGCGGGCGAAGCTTGATGGGCAATCGCTACCTCTGCCTGTGTTATTAGTGCGCTCTGCCG
AGCACACCATGGCACTGCAAGTAGATACGCTATTAGGTAGCCGCGAGATTGTGGTAAAAAGCTTAGGGCAGCAATTTAGT
ACGGTACAGGGCTTGTCGGGCGCCACAGTAATGGGTGACGGTAGCGTTGTAGTTATTCTCGACCCACACGCACTTGTGCG
TAAAGAAATGGCGTTGGCTACGGCCGCTATTGCAATGACCGGCCACGAGCCAGTGCAAGAGAAAGAGCGCGAAGTACAAA
CGGTTATGGTAGTGGATGACTCCGTAACAGTACGTAAAGTAACGACCCGTTTCTTAGAGCGCGAAGGCTTTAACGTTATA
ACTGCAAAAGACGGCGTGGATGCCTTGCGCGTACTGCAAGATGAAATACCCGATGTGATGTTGCTAGATATCGAAATGCC
GCGCATGGATGGCTTCGAAGTGGCGAAAAATATTCGCAGCTCACAACGCTGGCGCGATATCCCCATTATTATGATTACAT
CACGTACCGGGGATAAACACAGAGAGCACGCCTTAAGCTTGGGTGTTAACAAGTATCTCGGTAAGCCATATCAAGAAGAC
GTACTGCTCGAAAGTATTGTTGAATTGATTGGCGGGGACGACAACCAATAG

Upstream 100 bases:

>100_bases
AGGTGAAGTAGTGGATTGGGTGCACCCGGACATGGTTCGTGTGCCAGTGGAAGAAGTGCAGGCTTACCGCCGCAAATAAT
TTAGGTATTGGGACTCCAAT

Downstream 100 bases:

>100_bases
CGGGGGTAGAGGTGCAAGCACTCCAGTTGGGTGTGCTGGCGGACACCAGTATTCACCTCTCAAAATTGCGAGAACTTATT
GTGGAGTGCGGTCACGAAGT

Product: putative CheA signal transduction histidine kinases

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>2336_residues
MGDKRNFAALEWVIGEISDTLKDARQALEAYVEDPKDSTRMRFCLTHIHQVHGSLQMVEFHGASLLAEEMEHTAQAIINN
DVASAPEAQEVLMRSMLQLPIYLDHVKIHKEDHPGVVLPLLNDLRAVRKQSFLSETNLFSPDMSAAERKSVKPHPVTQDA
AKLTQVLKKLREMYQFSAASVLRGIKIDENLTYIDKVMGRLELLTRGTTCHATWDISAALVDALRRDDLELSVAVRGLLR
FLARELRILGEKAPQSLARKPPVNLLKNLLYYVGKADAGSERVARIRAEYKLDTAEFDSGYGGVRSDGDGLNAPDPEAIR
SVVVALQEELNTVKHILDICLTGQGNPEGLAEVLPVVKRVGDTLAVLGIGDLRKQIVEQADVLEKMSQQNSLDEDELMQV
ATRVIDVEHKLDAISKVVGKSRDINDINEREIEIDQAKATVINECRHGLEKAKDAIVEYISSKWDVAQLENIGGLLHDIR
GGLDMIPLPRPAAIMDACNRYIQEALLSGETQPSWKALDALADAMASVEFYLERLSVDLDGDADQFLDIAEESVASLGFA
VTSRPVVPSQVIETETPVAEGSFAADTQADAVRDQSGQEASSQAESAQQEQPAESFDQGAEAAYEAQEPEDNTLDSAFAN
LPQVEIDEPQESVENEASDVSAVSDESTADYSEQPSSDNAFGQQDTASYEAPQTEPAGASVEEQQPAQDPADAPISLDMI
SVDDEPVAEEESDIDEEIIEIFIEEAGEVLETLEEYFPKWRADPTDNDSLVIVRRAFHTLKGSGRMVEAYDVGELAWSVE
NMLNRIIDKTVPYTAAHGNFIQLVLELTPTLVEAFKNRTANPQKALTETYMGYGAALAEGSIPDEVKELAGSDAATDSAA
QEEHAQQETEAPPAYYVEEDEDDDEDDRVLKEIFSSEARSHLATIQQFVDEMEAAAPIYTPPTDSLQRALHTLKGSAKMA
QVTLIAEMAEPLENFAKELITYQVPITDDILQLIKDAGSYTAGAIEAVENGREIEVSKLPQFLARAFELREMAVGHLIRL
KEMEKQGVNKVDPRLLSIFMAEEMTLLLEADQLLAQWQSNPGELERIDDVIRELTTLEQGAQQANLPDMASLSQRLSTVH
GHIKQNNLQLDEGFFETLLAGHNALLDMVDAVAAGQNMVPPQEYVVAAIESLIHSAEANAATRADAPQFDTEQADEFGSE
EIIIEDFSELNELESETEAEQQSELQGEQAEQLNPQDLSEPTSEEAFSFGEAAADASNESFDLGEQTSETVEFDNAQEEA
PTAADQSDTLAFAIDAEDADEISAGDDDYLDLVVEPLLIDEEDSNDLEINFDEESSEEISLEDESTFEDNAFDNVTESPT
EQAEETFGSLDNAFDAPTADETFATQELTDEHQLAGELGEHIDVVEVEGLGEPASEAEQTDTVDFELPHGEEAEFKSDVA
AEASEQTQAEECSDSNDSDSSGSDVSDSEFNESDFDELPEPPLEPQEPVAPVAAESTQPSHPVAEGMATIDGLLDSIDIQ
DPDYDEDIVEVFLEEADELCEELDEAIHTWESDWSNAEPSEIIKRALHTLKGGARLSGMNNLGELTHEYESYIIGTDFDS
TDEAFFAQLHSYQDKVLRGVRALHQFMRGDAAQVVASEEPTLGDVELVEEDEAGIAMVKQAQTSEAPATNDGEPGSSNVV
PFAPKTKDESGFIPTRPKEEDSGFVMPHASGGAQAAPQVAMKRSGPQEVVKVPADLLEELVNLAGETSISRGRLEQQVND
FGGALEEIDGTIHRLQEQLRRLDIETEAQIIFRQEQIAESDRNFDPLEMDRYSQLQQLSRSLIESASDLADLRSTLTDKV
RDTETLLLQQSRINSTLQEGLMRSRMVPFSRLVPRLRRIVRQVSSELGKSVTFELDNIEGELDRSVLERMVAPLEHMLRN
AVDHGIEMPDVRANAGKSETGRIVLTLGREGGDVTLRLADDGRGIDLKRVREKAIERGLMVDDATLSDRDIMQFILHAGF
STAESVTQISGRGVGMDVVHAEIKQLGGSVSINSEWGKGTEFLVRLPFTVSVNRALMVALGSDYFAVPLNNIEGIVRVSP
FELEHYYQNPEARFEYAGENYQVRYLGSMLIDGMRAKLDGQSLPLPVLLVRSAEHTMALQVDTLLGSREIVVKSLGQQFS
TVQGLSGATVMGDGSVVVILDPHALVRKEMALATAAIAMTGHEPVQEKEREVQTVMVVDDSVTVRKVTTRFLEREGFNVI
TAKDGVDALRVLQDEIPDVMLLDIEMPRMDGFEVAKNIRSSQRWRDIPIIMITSRTGDKHREHALSLGVNKYLGKPYQED
VLLESIVELIGGDDNQ

Sequences:
NA

Specific function: NA

COG id: COG0643

COG function: function code NT; Chemotaxis protein histidine kinase and related kinases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA