Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90023258

GI number:

Start: 4590155

End: 4592647

Strand: Reverse

Name: Not Available

Synonym: Sde_3618

Alternate gene names: NA

Gene position: NA

Preceding gene: 90023259

Following gene: 90023257

Centisome position: NA

GC content: NA

Gene sequence:

>2493_bases
ATGTACACAAATAGGAAATATAGAGAGAAAATCCAAGAGCTAACAAAAGAAACGAAGAATGATCGGCTTGAGGCAATGCT
GTATGCAAGGTTTTTGCTGCGGATGCTAATTATTGTTGGTGCCGTTGTCAGAAATTCAAAATGTTGGACAGTATCTGGAA
TTGAGCGCTGGGAAAGCGTTTCGAATAGTTCAGAAAATGAAGATAAAGGAGAGCGAATTTTAGGGTACAGCCTTCATGAT
TTTAAAAAACTAACAGATGATGAAAGATTCTATATAGGTATTCAATATATTGTAAAGAGTATCTTAGATGTCTTATCGAG
CGAAGCGTCGGAATCTTCTGTTATTGATTTAGACCGTTTGTCTGCCATTGCTATGGAGTCTGATACCGCGCATGAAGATA
CGAATGGTCTGTCTCATTTTGTTTTTAGATTAGCTGAGCAAGTGGTTAAATTGACGCGATTTAGTAGTGATCCAAATTAT
CAAAAATCATCTTTGATAGAAGACGATACCTGTTTTATAAAAAACGTTGATGGAATTGTTAGTGGACCTTTCGATGCATG
CTGTTTCGAAAAAATTCAGAGGGATATCGATCTAGTTAGACAAAAAGGAGGGGATGAACTACAGCGAGCTCCTCTTTGGG
ATGTCGGTGATTTGGATAACCCTGACTTTATTCATTGGCGATCTAATTTCGTGACTACTTTTGAGGATCTTGAGTTGAAA
CTCGAGGAGAGTGGATCGTCTGTATTCTCAAGTAGCGATAAAGGTTTATACAAATCGTTGGTGGATGGAGAAGCGTTGGC
AAGGATGATCAGTGCGACCTCCTATGTTTCGGCAGAAAATAAGGAAGTGATAAAAGATAGTTTAGCTAGAGATAGGTATG
TTTCAGCATTGGCCAAAATAATAAAGAATAAGCGTAATGACTGGAATATCTGTATTGGTCTGTTCGCCAGGTGGGGAGAC
GGAAAAACGGGTTTATTAAGTCTACTTAGCAAAAACTTAAGAAATAATAGCACTGATAAAAATAAATGTTATATCGCGAA
CTTTAATGCATGGGCTTATCAGGGAGCTGAGAGTGTCAGAGCAGCGATGGCGCATGAGATTGTTAAGACACTAACTACTA
AGTATTATCGTGAATATGCTAATGAAGATCACGCAGAAAGGAATTGGTTTATGATCTCTATTGAAAAGGTTTTTGGCTTT
GTTGTGGAGATAAGAGGTGTATTTACTAATCTTGTTTGTCGTTTTATTTTAGCTATTAAGTTTACTCGAAGAAAATCCAT
TTTAAAACTTATGGCTACATCTATAGTGGTAGTCCTAAGTGCACCATTTGTATATTCTGGACTATCCGATTTTATCGCTA
GCTTTTTTAAGGACTGGAGACTTATAAACCCTTCCGATGTAAATTATTTGGCGGCAGTAGAGGCGTCAATTGGTGTGCTT
GTATCAGTAATTAGCCTGCTTCCTCACCGAAAAGTATTGGCTCAGCTGTATACTTCTGAGCTTCGCACTTATTTGGAATT
GCCAAGTTATGCTAAGGATATTGGCGATGTGCCTCAGATGAGTCAAGATCTTAAAATACTATGCGGTATACAGTTAGGAG
CAGGAGCGCGCGAAAAATATACTAGGCGAATGGTGGTCATTGTTGATGATCTTGATCGTTGTGAACCAGATTGTATTGTG
AAAGTATTTGAAGCTATAAAGCTGGTGATGGATATACCGAATGTTATAGTAATTATTTCAATGGATCATAGGATAGCACT
ATCTGCATTGTCAGAAAATTATCAATCAATAGAGAGCTATCATGAGTTAGGTTGCGCTAGAAGTATTGCAAGAGATTATT
TGGGGAAAATAATTAATTATTCAATTTGTTTGCCACCTTTGTCGAGCGATAATGTTAAGGCGTATATTGCGCATTTAATA
GAAGAAAGTGCAGCAGAAACTTTGAACAGCCAGTCAATAAGCGCAAATGGTAGGGCAAAAGAGACCAATGTACAGCCAGA
AGCCGAACAGGACCAATCTGGTGCTAGCCAAAAGAGGAGTGAAAAGGATAAACAAAAGAATGAGAGCAAGAAGTTGGAAG
AAAAGTCTTCTGAGGTTGAGTTCGTGGATAGAGATATTCAGCGCAGCCTAGCTGATTGGGCTATTAAGTTGGGTATCAAT
AATCCACGCCAGATAAAGAGATTGTACAATAGTTATCACATGATGATTAACATCTATCCTGGGGAGCAGATAGGGCCGAA
AGACGACGGTGCCCACACAAATTTAGCTCTATTGGCTTTGATGCTTGTCGAAAAAGTGAATAGCGAGTCGAGCAGTAAAG
TGAGATCAGAGCTTTGGAAATATTTATGTGATGGGCCTACTGTAAGACTGCCTTCAGTAGATGGCGATTCGGACCTAGAA
GAGGTCATTAAAATCTTTCATGGAGAAATTAATGGAGCTAAACGAGAAGAAATTCTTGCAAAGGCTAGCCAGTTTGTTCT
CCCCTATTGCTAG

Upstream 100 bases:

>100_bases
TTGAAGGCTGCACTGGCCGTGGTCAGGGTGTTTTGTCCAGTCTATTTCTTTAACAATACTGTCGTAATATTGGTTATTGC
TTAGCTAAAAAGGAAAGCGC

Downstream 100 bases:

>100_bases
CTTGAATTCGCAAAAGAAGTACTTGCTAAATAGGCTGTAATTAAAGCGATGAGTGTATTTAATAAGGACATACATATGAA
TACAAAATATTTATTAATTC

Product: putative oxygen-independent coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>830_residues
MYTNRKYREKIQELTKETKNDRLEAMLYARFLLRMLIIVGAVVRNSKCWTVSGIERWESVSNSSENEDKGERILGYSLHD
FKKLTDDERFYIGIQYIVKSILDVLSSEASESSVIDLDRLSAIAMESDTAHEDTNGLSHFVFRLAEQVVKLTRFSSDPNY
QKSSLIEDDTCFIKNVDGIVSGPFDACCFEKIQRDIDLVRQKGGDELQRAPLWDVGDLDNPDFIHWRSNFVTTFEDLELK
LEESGSSVFSSSDKGLYKSLVDGEALARMISATSYVSAENKEVIKDSLARDRYVSALAKIIKNKRNDWNICIGLFARWGD
GKTGLLSLLSKNLRNNSTDKNKCYIANFNAWAYQGAESVRAAMAHEIVKTLTTKYYREYANEDHAERNWFMISIEKVFGF
VVEIRGVFTNLVCRFILAIKFTRRKSILKLMATSIVVVLSAPFVYSGLSDFIASFFKDWRLINPSDVNYLAAVEASIGVL
VSVISLLPHRKVLAQLYTSELRTYLELPSYAKDIGDVPQMSQDLKILCGIQLGAGAREKYTRRMVVIVDDLDRCEPDCIV
KVFEAIKLVMDIPNVIVIISMDHRIALSALSENYQSIESYHELGCARSIARDYLGKIINYSICLPPLSSDNVKAYIAHLI
EESAAETLNSQSISANGRAKETNVQPEAEQDQSGASQKRSEKDKQKNESKKLEEKSSEVEFVDRDIQRSLADWAIKLGIN
NPRQIKRLYNSYHMMINIYPGEQIGPKDDGAHTNLALLALMLVEKVNSESSSKVRSELWKYLCDGPTVRLPSVDGDSDLE
EVIKIFHGEINGAKREEILAKASQFVLPYC

Sequences:
NA

Specific function: NA

COG id: COG4928

COG function: function code R; Predicted P-loop ATPase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA