Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90023188

GI number:

Start: 4509412

End: 4512354

Strand: Direct

Name: Not Available

Synonym: Sde_3548

Alternate gene names: NA

Gene position: NA

Preceding gene: 90023183

Following gene: 90023189

Centisome position: NA

GC content: NA

Gene sequence:

>2943_bases
ATGAATAAATACTGGCTCTACACTTTCACCTCTGCCTGCGTGCTAGCTGCACTTGGCGGCTGTGATGCGAGCAACGGCGA
TTTACAGGGTGGCAGCTCCAGCGGCCAAGACCCCGACCCAGTGGTAGTGGATTTCCCTATTGCTTATGTCGAACGCCCCC
TGCCGCGCGACGATGAGTCTGGCATGCTACTAGCCGACAACGTATTGGACCCAGCCGCCTTTAAGCCAGGCGCAAAACTT
ATTATTAAAGACCGCGCCGCAGTGGCAGCCAGTGAGATAGTACTTACCGCAGGCGTTTTTGGCAGCGCCAATACAGATGG
CGACGAACCACTCTACGATGTAAAAGATCTAGAAACGTCGGACGATGGCTTAAAACTTATATTTGCCATGCGCGCACCCG
CCGATGAAGATGCCGACGAAGATGAACAACCCACTTGGAATATTTGGGAATACGACCGCGAAACCGACGTTTTGCGTCGT
ATTATTCAATCGGATATCGCCGCAGAAGCGGGCGAAGATGTGGCACCTTACTATTTACCCGATGGCCGCATAGTTTTTTC
CTCCACCCGCCAACGCCGCAGCAAAGCTATATTGCTGGATGAAAACAAACCTCAGTTTGCAGCGCTTACCGAAGACAGAG
AGCAAGAAGCATTTCTACTGCACGTAATGGACGACGACGGCGCTAATATCGAACAGCTTACATTTAACCAAAGCCACGAC
TTGCACCCAACCGTGCTCGATAACGGCCAAATTCTATTTTTGCGCTGGGATAATTTCGATAATCGCGGCGGTATGGATCG
ACTCAGCCTGTACACCATTAACCCCGACGGCACCAACCCCGCCCTTGCGTACGGCTACCATTCACAACTTACTGGCACCA
ACAGTACTGAAGGCGTTTTTAACCAACCTCGCCAGCTACAAAACGGCAAGGTGCTAGTGAATTTACGTCCGCGCGAATTC
GATCAACTAGGCGGCGACTTAGTTGAAATAGACATAGACGGCTATACAGACCTCACCCAAGCTGCTGGTAGCAACATGGG
TGGCGTCGGCCCTGCGCAGGAAGTGGCCACCAACGCCCCTGTGCACACCGACGGCACACCCTCGCCCCACGGCTTTTTTA
GTAGCGCCTACCCCATGGCCGACAACACCGGCCGCTACTTAGTAAGCTGGAGCCCATGCGTGGTGCGCGGCTACCGTTTT
GGCACCTATGTAAATGCTTCGCTGCAACTCATCGACGTCGCCGGCGACTTTGTTAATCGCGATGGCGAACTGCTTGCAGA
AGGCCAAACGGCCATCACAATCGAAGAAGACGAAGTAGGCACCTTCCCCTGTAACGATCGCACACTTGCCAGTACCGCTG
TCGTTTTAGCCGAGCCCATGTACGGCTTATGGGTGTACGACCCCGTTATCGCCACCCAATCGCCCGTAGATTTAGCTACC
CCAAATCGCATGGTTACCGAAGCGGTTATTATGGAGCCGGTGACACCCGCCACCCACCTAGAAACCACATTGCGCGACCA
AGATAGAGCCGCACTGGTAGAGCAAGATGTAGGCGTTGTGCATATTCACAGCGTTTACGACTTAGACGGCGAAGACACCT
CCCCCGCAGGCATTATCGCCACTGCCGACCCCATGCAAGTCGCCCCCGACGAGCGCCCTGCACGCTTTCTGCGTATATTA
AAAGCGGTATCGCTGCCCGATGACGACGTATTCGACTTTAACCTAGGCGTTGCAGACGGGGCGGGTAACTTCCGCATGAA
AGATATTCTCGGCTATGTACCGGTGGAGCCAGATGGCTCGGCCATGTTTAAAGTGCCCGCCGATGTGGCCGTTACTTTTT
CGGTGGTCAATGCCGAGGGCAAGCGTATCTCCGAGCGTCACCAAAACTGGTTTACTGTGCGCGCAGGCGAGGTGCGCCAA
TGTACAGGTTGCCACGTGCGCGACTCCGAAGTGCCCCACGGCAACGCAGCCAAAGGCTTAGACTCTATCAATATGGGGGC
GCTCTCTAGCAGCCACTTCCCCAACACCGTATTGCTAGACACCCTCGACCCCATGAACCCGCTGCCGCAATTGCCGCCCA
ATGTGGGCGAAACCATGGCGGCCTACTACGCGCGTATAAACAGCAGCAGCTCCTCCACGGTAGACGGCGCACGCACACCA
TCGGTAAATATTTACTTTGAAGATGAATGGACAGATGAAACCACGGGGTTAACCAAGGCAGATATAATCGATTTCAGCTA
CAACGATTTAAACTCGCCAGCGCCAACCACCAATTCCGCTTGCATCAATAACTGGAACAGCCTCTGCCGCGTAGTGATTA
ACTACGAAGATCATATTCACCCCATCTGGGAAGCTTCGCGAATGATAGACAGAGGAATGGGCGAGGAGAACTTTACCTGT
ACCACATGCCACAGCGCAGTAGACGAAGCCGGGCTACAAAAATTGCCCGCTGGTGAGCGCCAGTTAGAGTTAACCGGCGA
ACTATCACAGGTTAACAATAATTATATGGTGTCCTACGCTGAACTATTCTTAGCTAGCCCAGTGTACGAACTCAACCCAG
AAACAGGCATACTGCAACCTGAAACAGAACATAAACAAGTTGACGGCGTATTCGTGTACTATGCGAGACAAACCATCGTA
GACGAAGACGGCAATGAAGAAGTTATCGATATTGAAGCGCCGTTAGACACCGAGTTTGAATTAGTTTTAGATGAAGAAGG
CCAACCCATACCGGTTATAGTAAATACCGATCGCACCTTTGGACGCATCATGGTGCCGGGCCGAGCCCTATCAAGCCAAG
TGTTTTTCAACACGTTTTCGCAAGCAGGGGCAACGGTTGATCACCGCGGGCTATTGAGTGGCGCCGAACTAAAACTTATA
TCAGAATGGCTGGATATAGGTGCACAGTATTACAGCAACCCATTTGATGCACCGCCCGATTGA

Upstream 100 bases:

>100_bases
AATAATATTCAACACCTTAACGCGCTATATAATGGCGCGAAGGTAACGCAACATCTGATAGATAGCGCTGCGCGCAACGG
ATACGGACAGGCGAAATAGC

Downstream 100 bases:

>100_bases
TAGTAAGCGTGCGCTTACACTTCGCCCTAAACAGCGATTAGAAACAGGTTAAATAACAGCGTTTAATAACCAAAAACACA
TACAGCAATCATTGCCCATC

Product: type II secretion system protein C

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>980_residues
MNKYWLYTFTSACVLAALGGCDASNGDLQGGSSSGQDPDPVVVDFPIAYVERPLPRDDESGMLLADNVLDPAAFKPGAKL
IIKDRAAVAASEIVLTAGVFGSANTDGDEPLYDVKDLETSDDGLKLIFAMRAPADEDADEDEQPTWNIWEYDRETDVLRR
IIQSDIAAEAGEDVAPYYLPDGRIVFSSTRQRRSKAILLDENKPQFAALTEDREQEAFLLHVMDDDGANIEQLTFNQSHD
LHPTVLDNGQILFLRWDNFDNRGGMDRLSLYTINPDGTNPALAYGYHSQLTGTNSTEGVFNQPRQLQNGKVLVNLRPREF
DQLGGDLVEIDIDGYTDLTQAAGSNMGGVGPAQEVATNAPVHTDGTPSPHGFFSSAYPMADNTGRYLVSWSPCVVRGYRF
GTYVNASLQLIDVAGDFVNRDGELLAEGQTAITIEEDEVGTFPCNDRTLASTAVVLAEPMYGLWVYDPVIATQSPVDLAT
PNRMVTEAVIMEPVTPATHLETTLRDQDRAALVEQDVGVVHIHSVYDLDGEDTSPAGIIATADPMQVAPDERPARFLRIL
KAVSLPDDDVFDFNLGVADGAGNFRMKDILGYVPVEPDGSAMFKVPADVAVTFSVVNAEGKRISERHQNWFTVRAGEVRQ
CTGCHVRDSEVPHGNAAKGLDSINMGALSSSHFPNTVLLDTLDPMNPLPQLPPNVGETMAAYYARINSSSSSTVDGARTP
SVNIYFEDEWTDETTGLTKADIIDFSYNDLNSPAPTTNSACINNWNSLCRVVINYEDHIHPIWEASRMIDRGMGEENFTC
TTCHSAVDEAGLQKLPAGERQLELTGELSQVNNNYMVSYAELFLASPVYELNPETGILQPETEHKQVDGVFVYYARQTIV
DEDGNEEVIDIEAPLDTEFELVLDEEGQPIPVIVNTDRTFGRIMVPGRALSSQVFFNTFSQAGATVDHRGLLSGAELKLI
SEWLDIGAQYYSNPFDAPPD

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA