Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 90023021

GI number:

Start: 4312100

End: 4314049

Strand: Direct

Name: Not Available

Synonym: Sde_3381

Alternate gene names: NA

Gene position: NA

Preceding gene: 90023020

Following gene: 90023022

Centisome position: NA

GC content: NA

Gene sequence:

>1950_bases
ATGTTTGACCAAATTCCGACGCAGCGCCCGAATACCCCTCTTCTGGATGTCGTAGACACCCCAGCACGCCTGCGTGAATT
AAGCGAAAAGCAACTCCCCCAGCTAGCCAAAGAACTGCGTGAATATTTGCTGTATACCGTAGGTCAAACCGGCGGCCATT
TCGGCGCAGGTTTAGGGGTTGTAGAGCTAACCGTCGCTTTGCACTATGTGTTAAACACCCCAGATGACAGGCTAGTATGG
GATGTAGGCCACCAAACTTACCCCCATAAAATTCTTACCGGCCGCCGCGAGCAAATGTCCAGCATTCGCCAACTAGACGG
CCTATCGGGTTTCCCCAAGCGCAGCGAAAGCGAGTTCGATACCTTTGGCGTTGGCCATTCAAGTACGTCGATAAGCGCAG
CCCTAGGCATGGCACTCGCCGCCGAAATGACCGACAACCAGCAACAAACAGTGGCGGTAATAGGCGACGGCTCCATGACC
GCAGGCATGGCCTTCGAAGCGCTAAACCACGCCGCGCACGCCGACACCAATATGATGGTGATATTGAACGACAACAATAT
GTCGATCTCTAAAAATGTGGGCGGGCTGGCCAATTACTTCTCTAAAATTTGGGCAAGTAAAACATACTGCGCCTTGCGCG
AGGGTAGTAAGCGCGTACTTACCAAAATTCCACAGGCTTGGGAACTCGCTCGAAAAACCGAAGAGCACATGAAAGGCATG
GTATCCCCGGGTACCCTATTCGAAGAATTGGGGTTTTACTATGTGGGCCCCATCGACGGCCACGACTTAGAGCGCTTGGT
ACACGATATTCGCAATATGCTCGCCATCCCCGGCCCCAAGCTGCTGCACATCATTACTCAAAAGGGCAAGGGTTTTACCC
CCGCCGAAAAAGACCCTGTTGGCTACCACGCACTCAATAAAATAGAGCCTAAAGCCAGCATCACCCCCATTAGCGCCAGC
GGCGGCGCTGAAGCCCCCGCAGCTAGCACAATTAAAAAGCCCAAATACCAAACCGTATTTGGCGACTGGTTATGCGATCT
CGCAGAAGTCGACCCCTTCGTATTAGGTATTACACCAGCAATGTGCGATGGCAGCGGCATGGTAGAATTTGCCGAGCGCT
TCCCCGACCGCTTTCACGATGTCGCCATTGCCGAACAACACGCCGTAACCCTAGCCGCAGGCTTAGCATGTGAAAAATTC
AAACCTGTTGTAGCCATATATTCCACCTTTTTACAGCGCGCGTACGATCAACTGGTGCACGACGTAGCATTGCAAAACCT
CGATGTTACCTTTGCCATCGACCGCGCCGGCCTAGTAGGTGAAGACGGCCCAACACATGCGGGCGCATTCGATATAAGCT
TTTTGCGCTGCATACCCAAAATAATTATTGCCACGCCTAGCGACGAAAACGAATGTCGCCAATTGCTGTTTAGCGCTTAC
CACCACCCAGGTGCAGCCGCCGTACGCTACCCGCGCGGCACAGGCCCCGGCGCCGTCATCGAATTAGAAAACCAGCACTG
GCCCATAGGCAAAGGTCGCGAGCTGCGCCAAGGCAAAACCGTGTGTTTTATTAATTTTGGTGTGTTACTACCCGACGCCA
TAGCCGTTGCAGAAGCTAATAATTACGGCGTATGCGATATGCGCTGGGCCAAACCGCTAGATAAAGACCTACTGCTAAAC
ATGGCAGAGCAATACGATTACCTAGTAACCCTCGAAGAAAACGCCGTCGCCGGCGGTGCGGGTGCAGGCGTAATGGAGCT
TCTGGCCGCCGAAGGCATTAGCACCCCAGTATTGCCACTGGGCCTACCCGACGAGTACTTAGACCACGGCAAACGCAGCC
AGCTTTTACAAGCCGCCGGCCTAGACAGAGCGAGCATTAACCAGCGGATAAATCAATGGCTAAGCCGCCATAATGGCGCT
GCGCACGATTCGCAAATACACAGCCTGTAA

Upstream 100 bases:

>100_bases
CCAATTAAACCTTTCAAAAGGCTAGCGCTAACAATACAATTGCGGGTTATCGCCTAAATAATTACTTTGGGCACAAACCT
GCAATACGTGTAATCTGTTA

Downstream 100 bases:

>100_bases
GCAATAAGCAGCATCCCCCCCTTTGCCTTAGCACTCCCCGTCAATGCCCTGCAATATGGCATTGACGCCTACTGTCACAT
TTATATTTCAATAACCCTTC

Product: 1-deoxy-D-xylulose-5-phosphate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>649_residues
MFDQIPTQRPNTPLLDVVDTPARLRELSEKQLPQLAKELREYLLYTVGQTGGHFGAGLGVVELTVALHYVLNTPDDRLVW
DVGHQTYPHKILTGRREQMSSIRQLDGLSGFPKRSESEFDTFGVGHSSTSISAALGMALAAEMTDNQQQTVAVIGDGSMT
AGMAFEALNHAAHADTNMMVILNDNNMSISKNVGGLANYFSKIWASKTYCALREGSKRVLTKIPQAWELARKTEEHMKGM
VSPGTLFEELGFYYVGPIDGHDLERLVHDIRNMLAIPGPKLLHIITQKGKGFTPAEKDPVGYHALNKIEPKASITPISAS
GGAEAPAASTIKKPKYQTVFGDWLCDLAEVDPFVLGITPAMCDGSGMVEFAERFPDRFHDVAIAEQHAVTLAAGLACEKF
KPVVAIYSTFLQRAYDQLVHDVALQNLDVTFAIDRAGLVGEDGPTHAGAFDISFLRCIPKIIIATPSDENECRQLLFSAY
HHPGAAAVRYPRGTGPGAVIELENQHWPIGKGRELRQGKTVCFINFGVLLPDAIAVAEANNYGVCDMRWAKPLDKDLLLN
MAEQYDYLVTLEENAVAGGAGAGVMELLAAEGISTPVLPLGLPDEYLDHGKRSQLLQAAGLDRASINQRINQWLSRHNGA
AHDSQIHSL

Sequences:
NA

Specific function: NA

COG id: COG1154

COG function: function code HI; Deoxyxylulose-5-phosphate synthase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA