| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90023021
GI number:
Start: 4312100
End: 4314049
Strand: Direct
Name: Not Available
Synonym: Sde_3381
Alternate gene names: NA
Gene position: NA
Preceding gene: 90023020
Following gene: 90023022
Centisome position: NA
GC content: NA
Gene sequence:
>1950_bases ATGTTTGACCAAATTCCGACGCAGCGCCCGAATACCCCTCTTCTGGATGTCGTAGACACCCCAGCACGCCTGCGTGAATT AAGCGAAAAGCAACTCCCCCAGCTAGCCAAAGAACTGCGTGAATATTTGCTGTATACCGTAGGTCAAACCGGCGGCCATT TCGGCGCAGGTTTAGGGGTTGTAGAGCTAACCGTCGCTTTGCACTATGTGTTAAACACCCCAGATGACAGGCTAGTATGG GATGTAGGCCACCAAACTTACCCCCATAAAATTCTTACCGGCCGCCGCGAGCAAATGTCCAGCATTCGCCAACTAGACGG CCTATCGGGTTTCCCCAAGCGCAGCGAAAGCGAGTTCGATACCTTTGGCGTTGGCCATTCAAGTACGTCGATAAGCGCAG CCCTAGGCATGGCACTCGCCGCCGAAATGACCGACAACCAGCAACAAACAGTGGCGGTAATAGGCGACGGCTCCATGACC GCAGGCATGGCCTTCGAAGCGCTAAACCACGCCGCGCACGCCGACACCAATATGATGGTGATATTGAACGACAACAATAT GTCGATCTCTAAAAATGTGGGCGGGCTGGCCAATTACTTCTCTAAAATTTGGGCAAGTAAAACATACTGCGCCTTGCGCG AGGGTAGTAAGCGCGTACTTACCAAAATTCCACAGGCTTGGGAACTCGCTCGAAAAACCGAAGAGCACATGAAAGGCATG GTATCCCCGGGTACCCTATTCGAAGAATTGGGGTTTTACTATGTGGGCCCCATCGACGGCCACGACTTAGAGCGCTTGGT ACACGATATTCGCAATATGCTCGCCATCCCCGGCCCCAAGCTGCTGCACATCATTACTCAAAAGGGCAAGGGTTTTACCC CCGCCGAAAAAGACCCTGTTGGCTACCACGCACTCAATAAAATAGAGCCTAAAGCCAGCATCACCCCCATTAGCGCCAGC GGCGGCGCTGAAGCCCCCGCAGCTAGCACAATTAAAAAGCCCAAATACCAAACCGTATTTGGCGACTGGTTATGCGATCT CGCAGAAGTCGACCCCTTCGTATTAGGTATTACACCAGCAATGTGCGATGGCAGCGGCATGGTAGAATTTGCCGAGCGCT TCCCCGACCGCTTTCACGATGTCGCCATTGCCGAACAACACGCCGTAACCCTAGCCGCAGGCTTAGCATGTGAAAAATTC AAACCTGTTGTAGCCATATATTCCACCTTTTTACAGCGCGCGTACGATCAACTGGTGCACGACGTAGCATTGCAAAACCT CGATGTTACCTTTGCCATCGACCGCGCCGGCCTAGTAGGTGAAGACGGCCCAACACATGCGGGCGCATTCGATATAAGCT TTTTGCGCTGCATACCCAAAATAATTATTGCCACGCCTAGCGACGAAAACGAATGTCGCCAATTGCTGTTTAGCGCTTAC CACCACCCAGGTGCAGCCGCCGTACGCTACCCGCGCGGCACAGGCCCCGGCGCCGTCATCGAATTAGAAAACCAGCACTG GCCCATAGGCAAAGGTCGCGAGCTGCGCCAAGGCAAAACCGTGTGTTTTATTAATTTTGGTGTGTTACTACCCGACGCCA TAGCCGTTGCAGAAGCTAATAATTACGGCGTATGCGATATGCGCTGGGCCAAACCGCTAGATAAAGACCTACTGCTAAAC ATGGCAGAGCAATACGATTACCTAGTAACCCTCGAAGAAAACGCCGTCGCCGGCGGTGCGGGTGCAGGCGTAATGGAGCT TCTGGCCGCCGAAGGCATTAGCACCCCAGTATTGCCACTGGGCCTACCCGACGAGTACTTAGACCACGGCAAACGCAGCC AGCTTTTACAAGCCGCCGGCCTAGACAGAGCGAGCATTAACCAGCGGATAAATCAATGGCTAAGCCGCCATAATGGCGCT GCGCACGATTCGCAAATACACAGCCTGTAA
Upstream 100 bases:
>100_bases CCAATTAAACCTTTCAAAAGGCTAGCGCTAACAATACAATTGCGGGTTATCGCCTAAATAATTACTTTGGGCACAAACCT GCAATACGTGTAATCTGTTA
Downstream 100 bases:
>100_bases GCAATAAGCAGCATCCCCCCCTTTGCCTTAGCACTCCCCGTCAATGCCCTGCAATATGGCATTGACGCCTACTGTCACAT TTATATTTCAATAACCCTTC
Product: 1-deoxy-D-xylulose-5-phosphate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>649_residues MFDQIPTQRPNTPLLDVVDTPARLRELSEKQLPQLAKELREYLLYTVGQTGGHFGAGLGVVELTVALHYVLNTPDDRLVW DVGHQTYPHKILTGRREQMSSIRQLDGLSGFPKRSESEFDTFGVGHSSTSISAALGMALAAEMTDNQQQTVAVIGDGSMT AGMAFEALNHAAHADTNMMVILNDNNMSISKNVGGLANYFSKIWASKTYCALREGSKRVLTKIPQAWELARKTEEHMKGM VSPGTLFEELGFYYVGPIDGHDLERLVHDIRNMLAIPGPKLLHIITQKGKGFTPAEKDPVGYHALNKIEPKASITPISAS GGAEAPAASTIKKPKYQTVFGDWLCDLAEVDPFVLGITPAMCDGSGMVEFAERFPDRFHDVAIAEQHAVTLAAGLACEKF KPVVAIYSTFLQRAYDQLVHDVALQNLDVTFAIDRAGLVGEDGPTHAGAFDISFLRCIPKIIIATPSDENECRQLLFSAY HHPGAAAVRYPRGTGPGAVIELENQHWPIGKGRELRQGKTVCFINFGVLLPDAIAVAEANNYGVCDMRWAKPLDKDLLLN MAEQYDYLVTLEENAVAGGAGAGVMELLAAEGISTPVLPLGLPDEYLDHGKRSQLLQAAGLDRASINQRINQWLSRHNGA AHDSQIHSL
Sequences:
NA
Specific function: NA
COG id: COG1154
COG function: function code HI; Deoxyxylulose-5-phosphate synthase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA