Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022956

GI number:

Start: 4229759

End: 4231504

Strand: Reverse

Name: Not Available

Synonym: Sde_3316

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022959

Following gene: 90022955

Centisome position: NA

GC content: NA

Gene sequence:

>1746_bases
ATGCCAAAAACTAACCCTCCATCACTAGCCAGTCGCGCAAGCTTGCACGGTGGTTTAGCGTTTGAATTCGACTTTCCCAG
TGCCTCGTTAGAAGTGCTTGCGGGTAAAATGCCCGCTTTAATGGCACTGGCTACTACAGAAGGGGCGCTAATCTTCTCCA
ATGGCCATTTTGAATTGCTAGATGGAGCTGGGGATACGGTTGAGAGTGATACTGAGGCCGGCTTGTTCCCTGCGCCTTTA
CGTCTCTCGCTAACTAAACAAGCCAACCCTCACGATACTGTTTTTATGCAAGCGCTGCGTTATTTAGACGGCAGCGAGCA
CATCTATGAAATACACCGCTTTAAAGTGCCAGCAGTAGAAGAGGGGCGCACCGAGCTTATTTGTACGCTTGGGGTTTGCC
AAACTTCCCCCACCAATACTTCACCCCCGCAATTTGACCCGTTAACCGGCTTGGCTAATCGCGCGCAGTTGTATGAACAG
TTACGCCGAGCCATAGATTACGGCCGTGTGCATCGCGAGTGCGTAACGGTGATGATGCTGAATATTGATCGTTTTAAAAA
TATAAACGATAGCTTAGGTGTGGGTGCCGGCGACGATGTGCTAATTCAAATATCTGAAATATTGCGCAATGTATTGCGTG
ATAACGACACCGTAGCCCGCTTGGGTAGCGATGAATTTATTTTGCTGTTAGATAAGGTGGATAACCCTCATCACATAACC
AAAATTGCAGATAAAATTTTAAACGCTATTGGTCAGCCGTTAAATATTTGCGGTCACGAAATTACCTGTACCGCAAGCTT
GGGGGTAAGTCAGTTTCCTATTCATGGCGACTCAATCGATTTGCTGCTTAAGCACGCCGATGAAGCCATGGCGCGAGCAA
AAAGCGAAGGTAAAAATCGCTATAAAATTTATACCGCACAAATGAGCGAGCGCACAGTCGATGCCCTGCTAATGGAAAAC
GATTTGCGTCGCGCACTAGAGCAAGATGAATTTATTTTGTTTTATCAGCCGCAGGTACATTTGCGCACTGGCAAAATTAT
TGGGCTAGAGGCACTTATTCGCTGGCAGCATAAAACTAAGGGCGTTATTTCGCCGTTAGATTTTATTCCACTAGCAGAAG
AAACAGGTTTAATCGAAGAGGTGGGTGCATGGGTGCTTGCTCATGCTTGTGAACGTTTTCATCACTGGTTAAAGCAGGGG
TTGAGTTTAGGTAAGGTGGCAGTGAACTTATCGGCACGTCAATTTAGGCAAGCCCACTTTGCCGAAACGGTAGTAGAGGC
GTTAAATAAAAGTAAACTTCCTCCGCAATATTTAGAGCTGGAAATAACCGAAAGCCTAACTATGCAAGATACCGACGAGG
TGTTGCAAACGCTGGGCTATCTAAATAAGTTAGGGCTTTCTATTGCTATTGATGATTTTGGTACTGGCTATTCTTCTTTA
TCCTACCTTAAAAAATTCCCTGTAAATAAATTGAAAATAGACCGCACATTTATTCACGACGTGGGTTCCGAGCTAGACGA
TGGCGCTATCGCCAAATCGATTATCGACCTTGCTCATAATATGTCTATGCTTGTAGTAGCAGAGGGCGTAGAGCGCTTAG
GGCAATCTCGCTGGTTGTACGATCAAGGTTGTGATCAAGTGCAGGGCTATTATTTTTGCAAACCCCTCAGTGAAAATGAA
CTGTTAAAGCTGCTCTATAGTGAAAAAGTATTTAGAGATAGTAATGGCGATTGTTTTATTGTTTAG

Upstream 100 bases:

>100_bases
CCTGTATTGTGATCTATGCTTTAGTAAGTTGCTTTGGCACAGGTTTACCCCTGCCCCGCCATAGTGAGTGCTACGTAACG
CTATGAATTATAAATAAAAT

Downstream 100 bases:

>100_bases
GGGCTAGTTTACAGATTGCAGCGTACAGAACGCAGGGTGAGAGTGGTGTATGGGTAGGCAGTGGATGATATTTAAAAGGT
ATTTTGTTTTGGGGTGTGTG

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>581_residues
MPKTNPPSLASRASLHGGLAFEFDFPSASLEVLAGKMPALMALATTEGALIFSNGHFELLDGAGDTVESDTEAGLFPAPL
RLSLTKQANPHDTVFMQALRYLDGSEHIYEIHRFKVPAVEEGRTELICTLGVCQTSPTNTSPPQFDPLTGLANRAQLYEQ
LRRAIDYGRVHRECVTVMMLNIDRFKNINDSLGVGAGDDVLIQISEILRNVLRDNDTVARLGSDEFILLLDKVDNPHHIT
KIADKILNAIGQPLNICGHEITCTASLGVSQFPIHGDSIDLLLKHADEAMARAKSEGKNRYKIYTAQMSERTVDALLMEN
DLRRALEQDEFILFYQPQVHLRTGKIIGLEALIRWQHKTKGVISPLDFIPLAEETGLIEEVGAWVLAHACERFHHWLKQG
LSLGKVAVNLSARQFRQAHFAETVVEALNKSKLPPQYLELEITESLTMQDTDEVLQTLGYLNKLGLSIAIDDFGTGYSSL
SYLKKFPVNKLKIDRTFIHDVGSELDDGAIAKSIIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLSENE
LLKLLYSEKVFRDSNGDCFIV

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA