| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90022930
GI number:
Start: 4201633
End: 4202982
Strand: Direct
Name: Not Available
Synonym: Sde_3290
Alternate gene names: NA
Gene position: NA
Preceding gene: 90022927
Following gene: 90022933
Centisome position: NA
GC content: NA
Gene sequence:
>1350_bases GTGCAGGCACCCTACACGAACCTCAAGACTCATCACAAATGGGTCGAATTCTCAGCAGAGGACACAACCTTGAATTTAAG CAATGCGAGCGTAGAACAACTGCAGGAGTGGAAGCAGCAGCTTTCCGCTGAATACGATAACGTCTTGGCACGTAAGCTAA ACCTAGACTTAACTCGCGGAAAACCTTCCGCAGAGCAGCTTAGTTTATCTGACGCCATGGACGGTATTTTGGCTGGCGAC TATATCACAGCTTCCGGCATTGATGTTCGCAATTACGGTGGTCTAGAAGGTATCCCAGAAGCGCGTGCAATCGGCAGCGA TATTTTAGGCGTGCCAGTAGAAAACGTTTTAGCAGGCGGCAACAGCAGCTTGACCTTAATGTATCAAACCATGGCAATAG CTCACCAATTTGGCCTTGCAGGCGAAGGCTCTGCGTGGAGCCAAGAAGGCACAGTGAAGTTTTTGTGCCCAGTACCAGGC TACGACCGCCACTACTCTGTATGTGAGCACCTTGGTATAGAGATGCTAACAGTAGCCATGACCTCTACCGGCCCAGATAT GGACCAAGTAGAAAAAATGATCGCTGCAGACCCAAGCATTAAAGGTATGTGGTGTGTGCCTAAGTACTCCAACCCAACTG GGGTTGTGTACAGCGATGAAACCGTTGAGCGTATAGCTAATTTAGGCAACATTGCCGGCAAAAACTTCCGCGTATTTTGG GATAATGCCTACGCCATTCACGACCTTTCGGATAACCCAGTTGCCTTGGCTAATATTTTTGAAGCTTGTAAAGCCGCTGG CACAGAAGATTCCGTTATCCAATTTGCCTCTACGTCTAAAGTTACCCATGCAGGTTCTGGTGTAGCGTTTATTGCGGCAA GCGATACTAACTTAAAATTCTTTAAGCTCGCGCTGGGTTTTATGACCATCGGGCCAGATAAAGTAAACCAATTGCGTCAC GCTAAATTCTTCGCTGCCGATGGTGCTCTAAGTGCACACATGGCTAAGCACGCGGCCATCATTAAGCCACGCTTTGCCAG TGTATTGAAGCACTTGGAAGCTGCATTCAGCGATAACGATTTAGGCGAGTGGGAATCTGCAGACGGCGGTTACTTTATTT CTTTCGATACCCGTCCAGGTTTAGCGCAGAAAGTGGTTAAGCTTGCTGGTGATGCTGGCGTAAAGTTAACACCTGCCGGT GCCACCTTCCCTTACGGCAAAGACCCACAAGATAGCAATATTCGCATTGCGCCTACTGTACCTACAGTGGATCAAGTAGA AGAAGCGATGCAAGTATTTGTGTTGTGTGTGAAGTTGGCTTCTGTGGAGCAGGCTTTAGCTAACAGCTAA
Upstream 100 bases:
>100_bases TTGCGCCCATTATCGTTAACAGCGCTGTTTTTAGGCTGGCAGCTAGCTGTATAATCTCGCCCCTGTTGCGTCTGCACAAG CCAAAACATGGTCAAAAACA
Downstream 100 bases:
>100_bases CAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAGCTAACAG CTAACAGCTAACAGAAAATA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>449_residues MQAPYTNLKTHHKWVEFSAEDTTLNLSNASVEQLQEWKQQLSAEYDNVLARKLNLDLTRGKPSAEQLSLSDAMDGILAGD YITASGIDVRNYGGLEGIPEARAIGSDILGVPVENVLAGGNSSLTLMYQTMAIAHQFGLAGEGSAWSQEGTVKFLCPVPG YDRHYSVCEHLGIEMLTVAMTSTGPDMDQVEKMIAADPSIKGMWCVPKYSNPTGVVYSDETVERIANLGNIAGKNFRVFW DNAYAIHDLSDNPVALANIFEACKAAGTEDSVIQFASTSKVTHAGSGVAFIAASDTNLKFFKLALGFMTIGPDKVNQLRH AKFFAADGALSAHMAKHAAIIKPRFASVLKHLEAAFSDNDLGEWESADGGYFISFDTRPGLAQKVVKLAGDAGVKLTPAG ATFPYGKDPQDSNIRIAPTVPTVDQVEEAMQVFVLCVKLASVEQALANS
Sequences:
NA
Specific function: NA
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA