Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022701

GI number:

Start: 3911426

End: 3912847

Strand: Direct

Name: Not Available

Synonym: Sde_3059

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022698

Following gene: 90022702

Centisome position: NA

GC content: NA

Gene sequence:

>1422_bases
ATGTCGCACCTTTACCAAACCTTGGCCACCGATATAGTTAAACAAATAGAAAACGGCCATTACCGCCCCGGCGATAAGCT
GCCCGGTATTCGCGCAATAAGCCGCCAGCGCAATGTAAGTATTGCCACTACCCAGTCGGCATTCAGGGTATTGGAAGATG
ATGGCTGGGTAGACGTTCGCCCGCGCTCAGGCTTTTATGTGCGCGCTCGCCAAACCGTAAGCCCTATCGTTGCAGCGGCA
CAGTCAGACCCAAAGCCCAGCAATGTTACCGGCCAAGATATGGCCCTAAGCCTGATAAAAGCGGCCAATAAACACCATAT
ATTACAGCTGGGCGCCGCAGTGCCAGACTTGTCTTTTTTACCTGTTCAGCCCATAAGCCAAGCCACCAGCCAAGCCCAAA
AGCGCTTTGGCGACCGCGCATTAAGCTACGAAATGCCGCCGGGTGCGCTAGAACTTCGCCGCCAAATAGCACGCCGTATG
GGCGAGGCGGGTTGTGCGGTAAGCAGCGAAGAAATTGTAATTACAAGCGGATGCCAGGAAGCGCTTACTATCGCCCTAAA
GGCCGTCACTAAAGCGGGAGACATTGTAGCTATAGAATCCCCCACCTTTTACGGGCTGTTGCAGGTTATAGAATCTCTTG
GCTTAGAAGCCTTAGAAATACCCGTAGACCCACAAACAGGTATGAGCCTAGATGCCCTAAAATTGGCCCTAGAGCGCTGG
CCAATTAAAGCCTGTGTTGTAGTGGCCAACTGCAGTAACCCCTTGGGCTACACCATGCCCGACGAGAGTAAGTTGGCACT
TACATCACTACTTACCGAGCACAACGTGCCCCTTATAGAAGACGATGTGTACGGCGACTTAAGCTTCGATAAGCACCGCC
CAGCACTGTGCCGCAGTTTGGCACCGCAGGCCGATATTATTTACTGCAGCTCGTTTTCTAAAACCTTAAGCCCTGGGTTG
CGCGTTGGCTGGATAGCCGCCGGTAAGCACTTGGCGCGCGTAGAGTACTTAAAGTACGTAAGCAATATAGCCAGCGCTAC
CTTGCCGCAACTTACGGTAGCTCACTTTTTAGAAAGCGGCCGATACGACCGCTACCTGCGCCAAGCTCGGGGGCAGTACG
CGCGTGCGGTTAGCCGCATGACCGACGCCGTTTTGCGCTACTTCCCTGAGGGTACAAGAGTAAGCCAACCCAGAGGCGGC
TTTGTAATATGGGTGGAACTGCCCTGCGCTATTAATACATTTGAACTTGCCCAGCTGGCCTTAGGCCAAGGTATTAGCAT
TGCACCCGGCCCTATATTTTCAGCAAAGCAAAAGTTTAAAAACGCTATGCGGCTGTCTTGCGCCTGCAAGTGGGATGAAA
AAGTAGAAAAAGGCTTAGCCTGGTTGGGCGCTAGAATTGAACATATGCAATTGAGCAAATAA

Upstream 100 bases:

>100_bases
CCCATACAACTGTTATTGGCTAGAACGGCCCCGCCAGTAAGGCCCAAATAGTCTAAAAACAGCAAAGCAAAAACCAAAAG
CAAAAACAGACAGGCATACT

Downstream 100 bases:

>100_bases
CAGCACTTACCCCGTGGCTGTATTTATGTTGCACAAAATATGGTGCCGAAAATACTCGGCACCATTACAATGCGCGCCCC
AGTTTTGGGGCTAACACTCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>473_residues
MSHLYQTLATDIVKQIENGHYRPGDKLPGIRAISRQRNVSIATTQSAFRVLEDDGWVDVRPRSGFYVRARQTVSPIVAAA
QSDPKPSNVTGQDMALSLIKAANKHHILQLGAAVPDLSFLPVQPISQATSQAQKRFGDRALSYEMPPGALELRRQIARRM
GEAGCAVSSEEIVITSGCQEALTIALKAVTKAGDIVAIESPTFYGLLQVIESLGLEALEIPVDPQTGMSLDALKLALERW
PIKACVVVANCSNPLGYTMPDESKLALTSLLTEHNVPLIEDDVYGDLSFDKHRPALCRSLAPQADIIYCSSFSKTLSPGL
RVGWIAAGKHLARVEYLKYVSNIASATLPQLTVAHFLESGRYDRYLRQARGQYARAVSRMTDAVLRYFPEGTRVSQPRGG
FVIWVELPCAINTFELAQLALGQGISIAPGPIFSAKQKFKNAMRLSCACKWDEKVEKGLAWLGARIEHMQLSK

Sequences:
NA

Specific function: NA

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA