Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022674

GI number:

Start: 3872852

End: 3874633

Strand: Direct

Name: Not Available

Synonym: Sde_3032

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022673

Following gene: 90022676

Centisome position: NA

GC content: NA

Gene sequence:

>1782_bases
ATGCAATTAGCTACCCACGCCAATACAGATACCCTAGCCCCTCTCTTTTTGCTTATTGAAGCGAATAACCAAGACGCAGA
TATACTTGAAATAAGGTTGCGAGACGCGTACCAACACCACCACGCGGTACTCGCTGTAGATTCGGTTCAAGCCGCTAGCG
AAGCGCTTACAGACTTTGAGTTCGACGCGCTTATTTATTGCTCTAGCACAGAAAACCTAAACACAACCGATACAGTAAAA
GCGTTTTGCGAACTTACGCCAAACTTACCCATTATTGTAATTACCGACGATAACGACTTTAGCTTAGCCAACCAAATTAT
CGCTAGCGGTGCAGAAGATTACTTGCATAAAAACGAACTAACCGCGGAAGCGCTATTGCGCAGCTTAGCGTTTGCCACAC
AACGAAAAAAAGCGCAAACATCGCACTTATTACACAGCCACTCTTCATTGGGCACCGATTCTATTCACGACATAACAACC
AATCAAAACCCGCTACAACAAGATTCTTTAACAGAAATACACAACTTAAGTTATTTTTACAATTACGCAACCACAGCCAT
TTTTCGCGCACAACGTGCAAACGCTCAGCTAGCTGTTTTATTATTTGATATAAACGACTTCGAGCTAATTAACCAACAGT
TTGGCCGTCACACTGGCGACCAGCTTTTACAGTTAGTTGCTAAACGTTGCGAAAACATTGTGCGCCACACTGAATGTATT
GCACGCCTATACGACGATACCTTTGCAATTATTACCGATACCCTAAACCACGAGCACGAAGCCTACCCGCTGGTAACGCG
CCTACAACAATGCTTTGACTCACCATTCGAAACGTCGCAAAAGCAAATAGTTGCAACGCCCTCTATTGGGGTTGCATTTT
TACCTCAACCTGCAGATTTAAACCATTGGGTAAAACAAGCAGACGCAGCCAAAACCCAAGCCAAAGCCAGCGCTAAAACC
AACGTTGAATTTGCAAGCGAATCGGCATCGGCCGGCTACAAGCGCACACAAAGTGTTGCAGCCAAAATAGAAAAGGGTTT
ACAGGGCCGTGAGTTTAGTACGGTTTTTCAAAGCTATTATTGCGATGACGACAGCAACCCACTGTATGCAGAGGCGTTTA
GCCGCTGGCGCTCTACAAGCCTAGGCAATGTAGCCCCGCGTGAGTTTTTACCAGCACTCAGCCAAAACAGCATGTTAGAT
GAATTAACCAAACAGGTGCTTGCCAATGTGGCACAACTGCAAGAGCAAGCACTTGCCGCTAATAGGCCTATAGGGAAATT
TAGCGTAAATATTAGTACGGCTCAGTTACACGACCGCATTTTTTGCGAAAACTTTTTACACTGGCTAAGCGTAAACGACT
TAAGCTCAAACACTATTTGTTTAGAAATTTCTGAACGCGAAAGCATTAATGCCATTCTTGCGTGCAAAAGTAATATCCAC
TTTTTACACCAGCAGGGCATTAGTTTTGCGCTAGATAATTTTGGCACCGGCAATACAGCCATGACCCAACTAGCAGACCT
ACCCATAGATTACTTAAAAATAGACCGCGCCATAACCCAAAACATAGATACCAACAAACCCATGCAGGCACTTAGCTCTA
GCGTAATAAAAATGGCGCACAAGCTGGGCATAAAGGTAGTAGCTGAAGGCATAGAAACGCAGGAAGAGTTTTACGTACTG
CGCGCATTCGACTGCGACTTCTACCAAGGCTTCTATTTTGGCCAACCCTGTAATTCACATACGTTGATGCAAGAACAAAC
CGTAGACATGAGGGCGCATTAA

Upstream 100 bases:

>100_bases
CAGTTTTATTGCGATTACCCTTAATACCTATAGCCCGCAAAAAGTAAAAGGTATAAGCCTTTTACCACGACTCAAAATAA
AACTAACAAGAGTCTTTTTT

Downstream 100 bases:

>100_bases
GGGTAGCTAACAGCGATTAGTTTACAGTTAACAGCCAAACCCTATTAGCGGCACACCCTTGGCTTTAGCTGTTAACTGTA
AACTGTCCCTCTGTTAACTA

Product: response regulator receiver modulated diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>593_residues
MQLATHANTDTLAPLFLLIEANNQDADILEIRLRDAYQHHHAVLAVDSVQAASEALTDFEFDALIYCSSTENLNTTDTVK
AFCELTPNLPIIVITDDNDFSLANQIIASGAEDYLHKNELTAEALLRSLAFATQRKKAQTSHLLHSHSSLGTDSIHDITT
NQNPLQQDSLTEIHNLSYFYNYATTAIFRAQRANAQLAVLLFDINDFELINQQFGRHTGDQLLQLVAKRCENIVRHTECI
ARLYDDTFAIITDTLNHEHEAYPLVTRLQQCFDSPFETSQKQIVATPSIGVAFLPQPADLNHWVKQADAAKTQAKASAKT
NVEFASESASAGYKRTQSVAAKIEKGLQGREFSTVFQSYYCDDDSNPLYAEAFSRWRSTSLGNVAPREFLPALSQNSMLD
ELTKQVLANVAQLQEQALAANRPIGKFSVNISTAQLHDRIFCENFLHWLSVNDLSSNTICLEISERESINAILACKSNIH
FLHQQGISFALDNFGTGNTAMTQLADLPIDYLKIDRAITQNIDTNKPMQALSSSVIKMAHKLGIKVVAEGIETQEEFYVL
RAFDCDFYQGFYFGQPCNSHTLMQEQTVDMRAH

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA