Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022634

GI number:

Start: 3805391

End: 3808339

Strand: Reverse

Name: Not Available

Synonym: Sde_2992

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022635

Following gene: 90022633

Centisome position: NA

GC content: NA

Gene sequence:

>2949_bases
ATGGAAAACATATTTCATTTAAAGAAAGCCGCGTTTATTTTTTGCGCTTTAACCAGCTGTTATAATTCGACAGCGTCATC
TCAACAAGACGATTACAGTGTTACAGCTACTGTATCTACCGAATTTAATCCCATGAGCTCGAGTTGGTATACCAACCCGT
GGCCCGAATCGGATATTCCTCGCAGATTAGAACAACTAACACCTAGCGTTATTACTCAGCTTGGGCAAACGTCTGGTACG
TTATTAGAGGTGGACCCTTCCACAACGTATCAAACGTTGCTTGGTTTAGGTGCGTCGCTAGAGCATACAACGGTTTACGC
TATTCGAAAAAACAAAACAGCAGAACAACAAAAAGAAGTATTGCGTTCACTTATCGACCCTGTGCAGGGCATGGGAATGA
ATTTTTTTCGTGTATCAATAGGCACGTCAGATTTTGCAGATGGAACACGCGCAATACCAGCGCCGGATAATGCGAAGGGG
TGGTATTCCTATCAAGATACACCCACGTCGCCGTTTTCTATTGCTCGCGACGAAAGCTTAGGCATTATTGAAACTATTCG
TATGGCGGTAGAGGTTGGCGTAGAAACAAATAATGAATTAAAAATTCTCGCTTCCCCATGGAGCCCGCCGCGCTGGATGC
GTGAAGGCGATAACATGGTAGATGGCGGCCCGCTTAAAGCGGATATGCTCGATGACTACGCGGCCTATTTGCGTAAATTT
GTAGAAGCTTATCAAGCAGAGGGTATTCCCATTTATGCCTTAAGCATGCAAAACGAACGTCAGTTCGAACCAGGGGCTTA
CCCCGGCATGGTTATAACATGGCAAATGGAGCGCGACCTACTTATAGAGGTATACGAAAACTTTCACAATATTGATGGCA
ACTATGGCCCAGAGCTTGATGTAAAACTGTGGACACTAGACCATAATTTTGATTATTGGCAGCAAGCGAAATTGCAGTTG
GATTCGTTCAAAGCAATGGGCAAAGACCATTACGTAGATGCCACTGCATTCCATCACTACGGTGGTGTGTCTGAAAATAT
GGGGCAGCTGCACGATGCTCACCCAGATAAAGACGTGGTGTTTACCGAAGGTACTATTTGGGGGTTAAGTTCAGATGGTA
ATAAGCGCAGCTACGAAGCACTTATACGTCATTTTCGCAATTGGGCTACTGGCTATCTTTCGTGGGTAACAATGACAACC
CAAACTCTAAACGAAGCAAACCAAGGGCCATATAACGGCTTAGGTGCATTCGATCCCACGCTATTGGTTAAATATGATGG
CGACAACGCCAATTGGTATAAAACGCCAGAATATTGGTTGATGAGTCAATTCAGTAAATACCTAAAGCCCGGCGCCCTGC
GTATAGAAAGTAATTACGGTTCGTTGCAAACCGTTACCAATGTTGCGTTTTTGAACCCTGATGGCTATGTCGTTTTAATT
GTGGCTAATTCCACCAACGGCGTGCAGCAATTTGATGTGATTAGTGAGGGGAATCAATTTAATGCATCGGTACCTGCGCG
TTCGATTGCAACCTATCGCTGGAAAGCGGGGTTGGGGCAAAGCCCGCACTCGTGGCAAGCACCGCCCGAATTGCCTCAGT
TCCCATACGCAGAAAACTCGATTGAAATTCCTGGGTTGGTAGAGGCTGAGCATTACGACCTTGGTGGCGCGGGTGCAGCG
TACGCAGATGTAAGCACTGGTAACAACGGCGGCGTATTGCGCGCAGATGATGTGGATATAGAGGCAAACGCAAACGGATA
TCACATTGGTTGGTTAGATGCCGGCGAGTGGCTTGAGTATTCCGTTAATGTAAACCAAGGGCAAAGCTTTGATGTGTTAA
TTGCTAGTGCGTCTGCAAGTAGCGGCGGGCAGTTTCATTTTGAAGTAAACGGCGAGTCGGTTTCTCCAATATTAGTAACA
CCTGCAACTGGTGGTTGGAAAACGTTTGTAAGCACGCTTCACCGTGGGCTACAGCTGAATGCAGGTGAGCAAGTGTTGCG
CTTGGTAATAGATGGTGGCGAATTTAATATTGATTCATTTCACATTGTGCCAGCAGGGAGCATGGAGCCACCTGTGCAAG
AGGATATTTGCGAAGAGGCGACGGTAAGTATCCTAGCAGGAAAAATCCAAGCGGAAAGTTATTGTCTAGCAAGCGGTATT
CAAACAGAAAATACTAGCGACCAAGGCGGTGGCGAAAATATTGGTTGGATAGACGCTGGTGATTCGGTGGACTACGGCGT
GAGCGTGGCGAATGCGGGTAGTTACACTCTTAATTTACGCGTAGCAAGTCAAAATGGAGGTGGAGAAATTGCGCTAAGTG
TTGGTGATACTGTTTTGGCAAATGTGCAAATACCAGGCACAGGCGGTTGGCAGAATTGGCAAACTATTAGCGTGCCTGTA
CAGCTCTCTGCTGGGTATCAACAGCTACATTTTGTTTTTATTAATGGTGGCTTAAATATTAATTGGTTTGAATTTGTAGA
AACTGATAATCCAACAGATCCAACAGATCCAACAGATCCCGCAGCAGAGCTAGAAGAGGGTGCCTACTACATAATTAATG
AGGCTTCTGGCAAGGCGCTAGATGTATCTGGTGTATCTACCAGTAACGGTACCAATGTTCAGCAGTGGTCATACAGCGGC
GGTTTGAATCAGCAGTGGATTGCCCAGCACGTAAGTGGTAATACATTTGAGCTGGTTAGTTTAAACAGTGGCTCTTGTTT
AGATGCAGATAATGGAAGTGATAATGCACACCAGTGGGCTTGCGAAGGCAACACCAACCAGCAGTGGGTTATTGAAGGGC
AATCGGACGGCACTTATTTAATTCGTACCAAAGCCGGTAACGAAGTATTGGAGGTGCAAGGTGGCAGCGCTAACAACGGT
GCAAATGTGCGTACTGCCAGCTCAGTAAATAATAATCGTCAGAAGTGGCGGTTTAATGATGTTGAGTAG

Upstream 100 bases:

>100_bases
TACAAGGCTATTTTGTGCGCTGCGTTTTAGTACCCAATGTATTACCGAATAGAACAAAGATTGATAGGGAACGATTTCTA
AAAATAATAATGAGTATCCT

Downstream 100 bases:

>100_bases
AGAAGTAATTGTTAATTAATACAATACAGTAAGTTATGTTTTATAAGCCCCTTCTGCGTGAGGGGCTTTTTTTGATGCAG
ATAGTACCGGTAATCTACCG

Product: helix-turn-helix, AraC type

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>982_residues
MENIFHLKKAAFIFCALTSCYNSTASSQQDDYSVTATVSTEFNPMSSSWYTNPWPESDIPRRLEQLTPSVITQLGQTSGT
LLEVDPSTTYQTLLGLGASLEHTTVYAIRKNKTAEQQKEVLRSLIDPVQGMGMNFFRVSIGTSDFADGTRAIPAPDNAKG
WYSYQDTPTSPFSIARDESLGIIETIRMAVEVGVETNNELKILASPWSPPRWMREGDNMVDGGPLKADMLDDYAAYLRKF
VEAYQAEGIPIYALSMQNERQFEPGAYPGMVITWQMERDLLIEVYENFHNIDGNYGPELDVKLWTLDHNFDYWQQAKLQL
DSFKAMGKDHYVDATAFHHYGGVSENMGQLHDAHPDKDVVFTEGTIWGLSSDGNKRSYEALIRHFRNWATGYLSWVTMTT
QTLNEANQGPYNGLGAFDPTLLVKYDGDNANWYKTPEYWLMSQFSKYLKPGALRIESNYGSLQTVTNVAFLNPDGYVVLI
VANSTNGVQQFDVISEGNQFNASVPARSIATYRWKAGLGQSPHSWQAPPELPQFPYAENSIEIPGLVEAEHYDLGGAGAA
YADVSTGNNGGVLRADDVDIEANANGYHIGWLDAGEWLEYSVNVNQGQSFDVLIASASASSGGQFHFEVNGESVSPILVT
PATGGWKTFVSTLHRGLQLNAGEQVLRLVIDGGEFNIDSFHIVPAGSMEPPVQEDICEEATVSILAGKIQAESYCLASGI
QTENTSDQGGGENIGWIDAGDSVDYGVSVANAGSYTLNLRVASQNGGGEIALSVGDTVLANVQIPGTGGWQNWQTISVPV
QLSAGYQQLHFVFINGGLNINWFEFVETDNPTDPTDPTDPAAELEEGAYYIINEASGKALDVSGVSTSNGTNVQQWSYSG
GLNQQWIAQHVSGNTFELVSLNSGSCLDADNGSDNAHQWACEGNTNQQWVIEGQSDGTYLIRTKAGNEVLEVQGGSANNG
ANVRTASSVNNNRQKWRFNDVE

Sequences:
NA

Specific function: NA

COG id: COG5520

COG function: function code M; O-Glycosyl hydrolase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA