| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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The map label for this gene is carB
Identifier: 90022373
GI number:
Start: 3454391
End: 3457624
Strand: Reverse
Name: carB
Synonym: Sde_2728
Alternate gene names: NA
Gene position: NA
Preceding gene: 90022374
Following gene: 90022372
Centisome position: NA
GC content: NA
Gene sequence:
>3234_bases ATGCCAAAACGTACAGACATTAAAAGTATTTTGATTATTGGTGCTGGCCCAATCGTAATTGGACAGGCCTGTGAGTTTGA CTATTCCGGTGCGCAAGCTTGTAAAGCACTACGCGAAGAGGGCTACCGAGTTATTTTGGTTAACTCTAACCCCGCCACCA TTATGACCGACCCCTCCATGGCCGATGCAACTTATATCGAGCCAATTACTTGGGAAACGGTAGCAAAAATTATTGAGAAA GAGCGCCCCGACGCGGTACTACCTACTATGGGTGGCCAAACTGCGCTGAATTGTGCTTTGGCATTGCACAAACACGGTGT GCTTGAAGAGTTTGGTGTTGAGCTAATTGGCGCAACCGAAGACGCAATTGATAAAGCAGAAGACCGTAACCGTTTTGACC AAGCCATGAAGAAAATTGGTTTGGAGTGTGCGCGAGCTAAAATTGTACACACCATGGAAGAAGCAAACCAAGTACCTAAA GAATTTGGTTTCCCATGTATTATTCGCCCGTCGTTTACTATGGGTGGTTCCGGTGGTGGTATTGCCTACAACTGGGAAGA ATTCGAAGAAATTTGTACGCGCGGTTTAGATTTATCGCCAACCAACGAATTGCTTATTGATGAATCGTTGTTGGGTTGGA AAGAATACGAAATGGAAGTTGTTCGCGATAAAAACGACAACTGCATTATTATTTGCTCCATCGAAAACTTTGACCCAATG GGCGTGCATACCGGTGACTCTATTACGGTTGCGCCAGCGCAAACCCTTACCGATAAAGAATATCAAATTATGCGTAACGC ATCGATTGCGGTGCTGCGTGAAATTGGTGTTGAAACGGGTGGCTCCAACGTGCAGTTCGCGGTTAACCCCGAAGATGGCC GTTTAGTTGTAATTGAAATGAACCCGCGTGTATCGCGCTCTTCCGCGCTTGCTTCTAAAGCTACTGGCTTCCCAATTGCA AAAATTGCAGCCAAGCTCGCTGTAGGTTACACCCTAGATGAATTGCAAAACGATATTACCGGCGGCGCAACTCCTGCTTC GTTCGAACCTAGTATCGATTACGTTGTAACAAAAATCCCTCGTTTTACTTTCGAAAAATTCGGCGATGCCGATGCGCGCT TAACCACGCAGATGAAATCTGTAGGTGAGGTAATGGCAATTGGTCGCAACTTCCAAGAGTCTTTGCAAAAAGCATTGCGC GGCTTAGAAGTTGGTTCTGCTGGTTTCGAACCGCGTGTAGATTTGACTGGCGACAATGCGTTAGAGCTTATTCGTCGCGA CCTTTCTACCCCGGGTGCTGAGCGTATTTGGTATGTGGCCGACGCATTCCGCGCAGGTATGACCGTAGAAGAAGTGCACG AGCAATCTGCTATTGACCCTTGGTTCTTGGTGCAAATTAAAGACATTATCGACACCGAAACGGCGCTTTCTTCTATGCCG TTGGTAGATGTTGATAAGCGCATTATGTTCAACCTTAAGCGCAAAGGTTTTTCCGATAAGCGCTTAGGTAAGCTGTTAGG TGTTTCCGAAAAAACCTTGCGTGGGCATCGTCATAAGTTAGACGTGCACCCTGTGTATAAGCGCGTAGATACCTGTGCAG CAGAGTTCTCAACCTCTACTGCGTATATGTATTCCACGTACGATGAAGAGTGTGAATCTAACCCTACGAGCCGTGAAAAA ATCATGGTTATTGGTGGCGGGCCTAACCGTATTGGACAGGGTATTGAGTTCGATTACTGCTGTGTACACGCTGCTTTGGC GTCGCGTGAAGCGGGCTACGAAGCCATTATGGTTAACTGTAACCCAGAGACAGTATCAACCGATTACGACACTTCCGACC GCTTGTATTTCGAGCCGGTTACCTTAGAAGACGTGTTAGAAATTGTTCATAGAGAAAAGCCAAAAGGTGTAATTGTGCAG TTTGGTGGCCAAACGCCACTTAAGCTAGCTAACGCCTTAGAAGCTGAAGGTGTACCTATTATTGGTACCAGCCCAGAAGC TATCGACCGCGCGGAAGATCGCGAGCGCTTCCAGCAAATGATTCAGCGATTAGAGTTGTTGCAACCACCTAATGCTATTG TGCGCTCAACAGAAGAGGCTATTCATATAGCACCTACCGTTGGTTACCCATTAGTTGTACGCCCATCTTATGTATTGGGT GGCCGCGCTATGGAAATTGTATACACCGAAAACGAATTAAGAACTTACATGCGCGAAGCGGTGCAGGCTTCTGAAGATTC GCCTGTATTGCTAGATCACTTCTTAAATAACGCAATTGAAGTTGATATTGATGCAGTGTCTGACGGCGAGCGCGTTGTTA TTGGCGGAATTATGCAGCACATTGAGCAATGTGGTGTTCACTCTGGTGACTCTGCATGTTCATTGCCGCCGTACTCTCTA CCTGAAGATGTGCAAGATGAAATGCGCGAGCAAGTGCGCAAAATGGCGCGCGAGCTAGGCGTTATTGGTTTGATGAACGT GCAGCTTGCATATCAAGACGGTCGTATTTACGTGATTGAAGTTAACCCTCGTGGTTCGCGTACTGTACCGTTTGTATCTA AGTGTATTGGTGTATCGCTTGCTAAAATTGCTGCGCTTTGTCAAACAGGCAAAACGTTAGAAGAGCTAGGCTTTACCGAA GAAATCGTGCCCGATTACTACAGCGTGAAAGAAGCGGTATTCCCGTTCAATAAATTCCCTGCTGTTGACCCAATACTTGG GCCAGAAATGAAATCTACCGGTGAAGTTATGGGTGTAGGTGATACCTTCGCCGAAGCTTACTCTAAGGCGCAGGTTGGCA GTGGTGGTGATTTACCAACATCTGGTACGGCATTTATTAGTGTGCGAGACTTTGATAAAGACGGCATAGTGGTAGTTGCT AAAGAGCTTACCGATATGGGCTTTAGTGTTGTTGCTACTCGCGGCACCGCAAAAACGTTAGAGGCGGCCGGCTTAAGCGT TAAAGTGGTTAACAAGGTAGGCGAAGGTCGCCCACACATTGTTGATATGATTAAAAACCGCGAAGTTGCTATGGTAATTA ATACCACCGAAGGCAAAAAAGCGATTAAAGATTCTGCGTCTATTCGTCGCAGCGCCGAAAATAATCATGTTTACTACACC ACAACGTTGGCAGCGGCTAATGCGCTTTGTATGGCATTGCGATTTGGTAAAAATCACGAAGTGCGCACTCTGCAAGAACT GCATGTACGTACTGCAAAACTTGCAAAAGCGTAA
Upstream 100 bases:
>100_bases ATTTGATGAATGAAGCAAAAAGCGAGATGTAATTTTATTACGCATTCGTCGCACGCCTTCGGGTGTTTAACATTAACGTC TCGCATTCTGCGGAGTAAAC
Downstream 100 bases:
>100_bases TATAAGGATAATTAAATGAGCTTAACTAAATACCCAATGACTGTCGCAGGCGAACTTGCTTTGCGCGAAGAGTTGGAAAG GCTGAAAAAAGTCGATCGTC
Product: carbamoyl phosphate synthase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1077_residues MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMADATYIEPITWETVAKIIEK ERPDAVLPTMGGQTALNCALALHKHGVLEEFGVELIGATEDAIDKAEDRNRFDQAMKKIGLECARAKIVHTMEEANQVPK EFGFPCIIRPSFTMGGSGGGIAYNWEEFEEICTRGLDLSPTNELLIDESLLGWKEYEMEVVRDKNDNCIIICSIENFDPM GVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPEDGRLVVIEMNPRVSRSSALASKATGFPIA KIAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIPRFTFEKFGDADARLTTQMKSVGEVMAIGRNFQESLQKALR GLEVGSAGFEPRVDLTGDNALELIRRDLSTPGAERIWYVADAFRAGMTVEEVHEQSAIDPWFLVQIKDIIDTETALSSMP LVDVDKRIMFNLKRKGFSDKRLGKLLGVSEKTLRGHRHKLDVHPVYKRVDTCAAEFSTSTAYMYSTYDEECESNPTSREK IMVIGGGPNRIGQGIEFDYCCVHAALASREAGYEAIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVHREKPKGVIVQ FGGQTPLKLANALEAEGVPIIGTSPEAIDRAEDRERFQQMIQRLELLQPPNAIVRSTEEAIHIAPTVGYPLVVRPSYVLG GRAMEIVYTENELRTYMREAVQASEDSPVLLDHFLNNAIEVDIDAVSDGERVVIGGIMQHIEQCGVHSGDSACSLPPYSL PEDVQDEMREQVRKMARELGVIGLMNVQLAYQDGRIYVIEVNPRGSRTVPFVSKCIGVSLAKIAALCQTGKTLEELGFTE EIVPDYYSVKEAVFPFNKFPAVDPILGPEMKSTGEVMGVGDTFAEAYSKAQVGSGGDLPTSGTAFISVRDFDKDGIVVVA KELTDMGFSVVATRGTAKTLEAAGLSVKVVNKVGEGRPHIVDMIKNREVAMVINTTEGKKAIKDSASIRRSAENNHVYYT TTLAAANALCMALRFGKNHEVRTLQELHVRTAKLAKA
Sequences:
NA
Specific function: NA
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA