Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022300

GI number:

Start: 3365912

End: 3369919

Strand: Reverse

Name: Not Available

Synonym: Sde_2655

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022305

Following gene: 90022294

Centisome position: NA

GC content: NA

Gene sequence:

>4008_bases
ATGCGAAATTTAAATAAAAATAAAGTACATATATTGCGAGCAGCAATTGCTGCAAGCATGAGTGTACTGCCACTTGCTGC
TGGTGCCGCCGATTATGTAATCGAAGCGGAAAACTTTGTGGCGCAGGGTGGCACCTACGTGGACGGACAACCCAATAAAG
TTAGCGTTTATAGTGTTAATGGCGCAACCGCTATTAACTATGTAAACCGAGCAGACTATACCGATTACCAAATTAATGTA
GCTACCCACGGTTATTACAATGTGCAATATGCTATTGGTACATCTGTAGCCAGTGGTGCGGCTATTGAGTTACTCGTACA
AAATGGCAGTAGCTGGGAATCGCAGGGGCAAACAAATGTGCCTGTTGGTCATTGGGATAGTTTTCAGCCTTTAAATGCAA
GTCATGAGGTAATCTTACCTGCGGGCACTGTAAATTTACGTGTATATGGTGCGGGGTCTAATGATTGGCAATGGAATTTA
GATTCTATTTCTCTCACCCTAGAGAGCGCTATTAACCCTCAGCCTGATCCAGATCCCGATCCTAGCCCTCAATTAGTAAA
AACTGAAGCCGAAGCCTTTAATGCGCAGAGCGGAACTTTCGCCGATGGTCAGCCTACACCGGTGAGTATTTATACTGTTA
ATGGAAAAACGGCGATAAACTTTGTAAACAAAGGCGATGCCGTTGAATACAACTTAGTTGCTCCGGCTGCCGGTTCATAC
GCATTAAAATACTCTATTGGTACCAGTGTTGCTTCCGGTAGTGAAGTAGAGTTTTTTGTTTTAAAAAATAATGTTTGGGT
TTCACAGGGTAAAACACCTGTGCCGGCTGTTGGTTGGGATAACTTTACCTCTGTTGCCAGTGCGCAAACCGTTGAGTTAG
CTGCTGGCTCAAATAAAGTTAAACTTGTTGGTGCTGGCACTAATGACTGGCAGTGGAATTTAGATTTCTTCGAGCTCACC
CTGGGAAATGTTGAACCAGAACCAGAACCAGAACCAGAGCCAGAACCAGAGCCAGAGCCAGAGCCAGAGCCAGAGCCAGA
GCCAGAGCCAGAACCAGAGCCAGAACCAGAACCTCAGCCAGAGCCCGATGGCGACCCCGTTCCTGTAAGTGGCTCGTTTA
AGTTAGAAGCCGAGCACTTTCAAAAGGTAGGTGGCGAAGTACAAATTTATTCTCTATCGCCAGGCAACGCGGTTAATTAT
TTTAACAGCGGTGATTACCTAGAGTTCTATGTCGACTTAGATGCAGGCGGTTTGTATGAAGCCAGCTTCAGAGTGGGTAC
TGGTGTGGCCTCTGATGTAGCCGTTGGCCTAATGGTTACAGATCACAAAGGTGACTTAACATTGAAGAGTGTTACACCCG
TAACGGATCAAGGTGGTTGGGATGCATTTTATAATCTCACCGCGCAAAGCCAGCTGAATATTTATAGTGGTATAAACACT
ATTCGTATTACAGGTGCAGGGTCTGCTGATTTTCAATTTAATATTGATAGCATCACTTTGACTCGTGTTGGGCCAATTAA
CCCAGCGCTAGATGGGGATAACGATGGTGTACCAGATACATCAGATAACTGCCCAAGTAGCCCCGCCAATGAAACGGCAA
ACGCTGAAGGTTGTGTACCGTCGCAATTAGACACTGATGAAGATGGTATTAACGATAAAATTGATCAATGCGATGCAACA
CCAGCAGGAGATTTTGTTGACGCCTTAGGTTGTACAAGTACTGGTGGTGACGACGATGACTTTGATGGCGTTTTAAACGG
TGCCGATCAATGTGGTAATACGCCTTACGGTATGAACGTTAATGCCCAAGGGTGTAGTGTGTTTTCTGGAAGCGATGCCG
ATAACGACGGTGTTGCAAACAGCGAAGACACCTGCGCAAATACGCCTGCGTTAGAATTCGCTAACGAACAGGGTTGTTCT
TCGTCGCAAGTGGCAAATACACATGTTGTTAACGTAAGTGTTAATGCTAACTTTAAGCGCTCTGTAAATGGTGTATTTGA
TTTCGGCCGCCGTCGTCACATGACTGCTCACACGGCTATTCACGAGCCAGATTGGGTAGGGCATACCGATAAGTTAAATT
ACCTATTCAACACCCTAGATGTTTACATGGGGCGTGATAACGGTTCGGCAACGTGGAAGTTTAACGACACTACCGAAGAT
CCTAATAAGCCCAACTGGCCAAATATGGACTACATGGTTGAGCGCGGTAAAGGGTTGCGAGAAGCGCATGACCAAAACCC
ATTGTTCAAACGTTTTAGTGCCGAAAAACAATTATTAATTGCCGGTACTAACCCGCACGCGTTGTACCCTACCTTAAGTT
GGTTCCCTAACGCGTTTACCTGGAGCGGTTGGCAGCCTAAAAATATTGAAACATCTGCAGCATGGGTGGGACAGTATATG
GAGCATTATTTTGCGAACGCTTCAAACGGCTATGTAGGTGAGCAGCTGCCCGAGTATTGGGAAGTAGTAAACGAACCGGA
TATGAAAATGAAAACCGGTCAGTTTATGGTAACCAATCAAGAGGCCATCTGGGAGTACCACAACTTGGTTGCGCAAGAAA
TTCGCGATCACCTTGGCGCAGAAGCACCTCCCATTGGTGGTATGACTTGGGGACAGCACGACTTCTATCGTCGCGATGGC
ATTTCGCGTTTTGCCGATGACTCTTACGATCAGTGGATTACAAACGATGACCAAGTATTGCAGGCAGAAGCTCGCGCTTT
TTATCGCAATGCTATGGCTACCACTGTAGATGATACTCGCGACCAAGATTGGTATCAGTGGGATGTAATGTGGAAAGGCT
TTATGGATGCGGCCGGCGACAACATGGACTTTTACTCTGTGCACATTTATGACTGGCCAGGAGAGAATGTTGGTGATACT
ACTGTTGTTCGTCGTGGTGGGCACACCTCTGCCATGCTAGAAATGATGGAGTGGTACGATGTAAAACGTAACGGCTTTAA
CAACCGTAAACCAATCGTACTTTCGGAGTACGGCTCAGTTAATGGGGCTTGGGATAATCGCGCCCACGAAGAGCGTTACG
ATATTGCAAGTATCAAAGCGTTTAATGGCATGTTAATGCAGTTCCTAGAGCGCCCAGACTACGTAATAAAATCTCTACCA
TTTACTCCTGCCAAACCTTTGTGGGGCTACCTGCCTGGTGGTTGTGGCTACGATGATGCAGTGGCCTGTACTACTCGTTA
CCATTACGCCATGTTAATTGAGGATGAGCTCAACAGTGGTAATTGGGAATGGTCTTCTTACATAAAGTTCTACGAGTTGT
GGGCAGATATAGACGGCACTCGTGTCGATTCTAAATCGTCTGATGTGGATGTACAGGTTGACTCTTATGTGAAAGGTAAC
GAGCTGTTCGTTATTCTTAACAACTTAGAAGCGGCCGACACAACGGTCAACCTTGATGTAAGCGGTATAGCCAGCGTGCA
AAATGTTGAATTGCGCAACATGCATTTCGATATTCAAGAGACGCATCTTGATCGCCATCATATGAGCGCTGCACCTAAAA
CGGTTACTCTAGCCGCCGATGCGACTGTGGTATTACGTTATACGCTTGCAAGCAGTGTTGCGGTAAATAACACCGTAGTA
GAGAAAAAGTACTTTGGTGAGAGTGTAAGTGGCGGTATAGAACCACATCGCATTTCGGTTGCAGGCGGTGCTAAAACGCT
TTATATCAATAACGTTTCGGTTCCAAGTGGCTACAGCGAAGCAATATTGCGCTTAACTGTATCGCTTTACCCAGACGAAG
ACGATAAAGTGGGCGGCCATTTAAGCCTAGATAGCATTACTGTTAACGGCACTGCCATAGAGGCGCCAATAGATTGGAAA
GGCCCGAAAGCAAACCGTGCAGAACGATTCTTCGGCGTACTTGATATTCCAGTACCTGTAGAATTATTGCAATCTACTAA
TACCATCGCAGTGGACTTCCGCCACAATGGTGAGTTAACGGTAGCAAACTTAATTGTGTCGGAATTTACTTCTGAGCCAA
ATAGATAA

Upstream 100 bases:

>100_bases
TACTTGCGCAGAACTCTATGTGATTAACGGAAAAATCACGAGGTTGGAGTAAAACAATAATGAAATTGGACTACCAAAAA
AATTCGGAGTCGCTTTTATC

Downstream 100 bases:

>100_bases
GGTTGACTGCTGAAAAGTGAAGTGTGTTTAGTGTAAATTCTCACACAACACATAGCATAAAAAAACCGGGCTATTAAGCC
CGGTTTTCTTTTAGAGATAA

Product: agarase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1335_residues
MRNLNKNKVHILRAAIAASMSVLPLAAGAADYVIEAENFVAQGGTYVDGQPNKVSVYSVNGATAINYVNRADYTDYQINV
ATHGYYNVQYAIGTSVASGAAIELLVQNGSSWESQGQTNVPVGHWDSFQPLNASHEVILPAGTVNLRVYGAGSNDWQWNL
DSISLTLESAINPQPDPDPDPSPQLVKTEAEAFNAQSGTFADGQPTPVSIYTVNGKTAINFVNKGDAVEYNLVAPAAGSY
ALKYSIGTSVASGSEVEFFVLKNNVWVSQGKTPVPAVGWDNFTSVASAQTVELAAGSNKVKLVGAGTNDWQWNLDFFELT
LGNVEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPQPEPDGDPVPVSGSFKLEAEHFQKVGGEVQIYSLSPGNAVNY
FNSGDYLEFYVDLDAGGLYEASFRVGTGVASDVAVGLMVTDHKGDLTLKSVTPVTDQGGWDAFYNLTAQSQLNIYSGINT
IRITGAGSADFQFNIDSITLTRVGPINPALDGDNDGVPDTSDNCPSSPANETANAEGCVPSQLDTDEDGINDKIDQCDAT
PAGDFVDALGCTSTGGDDDDFDGVLNGADQCGNTPYGMNVNAQGCSVFSGSDADNDGVANSEDTCANTPALEFANEQGCS
SSQVANTHVVNVSVNANFKRSVNGVFDFGRRRHMTAHTAIHEPDWVGHTDKLNYLFNTLDVYMGRDNGSATWKFNDTTED
PNKPNWPNMDYMVERGKGLREAHDQNPLFKRFSAEKQLLIAGTNPHALYPTLSWFPNAFTWSGWQPKNIETSAAWVGQYM
EHYFANASNGYVGEQLPEYWEVVNEPDMKMKTGQFMVTNQEAIWEYHNLVAQEIRDHLGAEAPPIGGMTWGQHDFYRRDG
ISRFADDSYDQWITNDDQVLQAEARAFYRNAMATTVDDTRDQDWYQWDVMWKGFMDAAGDNMDFYSVHIYDWPGENVGDT
TVVRRGGHTSAMLEMMEWYDVKRNGFNNRKPIVLSEYGSVNGAWDNRAHEERYDIASIKAFNGMLMQFLERPDYVIKSLP
FTPAKPLWGYLPGGCGYDDAVACTTRYHYAMLIEDELNSGNWEWSSYIKFYELWADIDGTRVDSKSSDVDVQVDSYVKGN
ELFVILNNLEAADTTVNLDVSGIASVQNVELRNMHFDIQETHLDRHHMSAAPKTVTLAADATVVLRYTLASSVAVNNTVV
EKKYFGESVSGGIEPHRISVAGGAKTLYINNVSVPSGYSEAILRLTVSLYPDEDDKVGGHLSLDSITVNGTAIEAPIDWK
GPKANRAERFFGVLDIPVPVELLQSTNTIAVDFRHNGELTVANLIVSEFTSEPNR

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA