Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022203

GI number:

Start: 3244539

End: 3249683

Strand: Reverse

Name: Not Available

Synonym: Sde_2558

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022204

Following gene: 90022202

Centisome position: NA

GC content: NA

Gene sequence:

>5145_bases
ATGCAAATCGTGAAAAGAAATCGAATCATTAAGTTTGTAAATTTAATAAGTAAAGCGATGTTGGCGATAACGGCGTCTAT
TGCTATAAATGCTAATGCGCAATTGCAAACAGTCGCAGATTTCGATGCGATCCCTCCTACCGTTGTAGACTCAACTACGC
CGCTTGTAATGCTTGTAATGTCGCGAGATAACCAGCTCTGGCACAAAGCCTATACGGATTATACCGATCTTGATGGCGAC
GGCACTATAGATACTACCTATAACGATCGATTCGAGTACTACGGCTATTTTCGTTCAGATCTTTGCTATACATACGCCAA
CGGCATGTTCTCGCCTGCTGCCGAAGTCGCTGAAAACTCGCACAAGTGTAGCGGTCAGTGGTCTGGTAACTTTATGAACT
GGCTGACCACAACGCGTATAGATGTTGTGCGTAAAGTGCTCTACGGTGGTTATCGCTCTACGGATACAGCCACGTCTACT
GTTTTACAGCGTGCGTTTATTCCTGCTGACAACCATGCATTTGTTAAAGTGGTTGATGCTTCAAAAATTGACGGGGTTAT
AGCGGATTATACGCCTATTACAGGGTTGTCAGTTGTTAGTTTTTGTAATGTTACTGATTACGATGTGGGGGCAAGCGATA
TATCTGGCGATATGTCAGCAATTGATAACCCTCCAAAGCTAAAAATGGCTGAAGGAGATCAAAAAGCATGGTCTGGAAGT
GAGCGTAATCAATGCCAATATTCTGGATCTGGTGGTGAAGGAGGGCGGTCTCAATTCTCACCTGGGAGGCCTACTGATTC
AGCTATTACAAGTATAGCGTCAGATGGTGAGTTAATTGTTCGCGTTGAAACTTGTTCCACTGCATTGGACTCGCCAGATG
CTAAGAGCTGTAAAGAATATGAAGACGATTCGGGTAATATCGTTCGTAAACCATATGGCATTTTACAAAGCTATGGAGAA
ACCGGAGAGTTTAGATTCGGTTTGATGACCGGTAGTTATGAGAAAAAAGACCGCGGTGGAGTACTTAGGAAAAATATTGC
GCTCATGGGCGGAGTTGATGCTGCAGCCGCAGATTTAGAAATAGATTTGGAAACAGGAGTGTTCCTGACGAAAGGCTCTG
GTGACCCAGGAATTATTAATACAATCAATCGCCTTCGTATACAGGGATGGGACTATGGTGACACACATTATGATGATTGT
GATACATACGGCCTTTCAATTAACAATTTCCTCTCTACTACTGCTTCGAATAATAGAAAGTGTAAAGACTGGGGAAATCC
GATTTCGGAGCTCTATGTAGAAGCCCTTAGGTATTTTGCTGGTGGTTCCGCTAATTCTGCCTATGTTACTGATGATGGTT
TTATTCCAACGGCGGCTTGGACAGATCCATTTAGTGCTGACGCTCCTTGCTCCAAATGTTCCATTATTGTGCTTTCGACG
GGCTTGAATAACTTTGATGGTGACTTGTATACGAACGCGCTCCCTAATTTGACATCAATTGAAAATGAAACGGATTTAGT
TGGTATAGCGGAAGGTTTGAATATAGGGCAATACGTGGTTGGTAATGCAACTGGTGGCACCGCAGATGAATGTGACGCTA
AATCAATACCTAGTCTAAGTGCTGCGAGTGGTCCGTGTCCAGAGGTGCCCCGTTTGCAGGGTACCTATAAAATAGCAGGT
GCTTCCTATTACGCAAAGAAAACTGATTTACGAACCTCGTTGATCGGTGAACAAACTGTTAATACCTATGCTGTTTCACT
ATCTGAGACGATGCCAAGCTTCGATATAACAACAAGCTCTGGAGAAAGTGTTAAGTTTGTACCAACTTGTCAAGCGCATA
GTAATGGTAGAAGGAGGGTAACGGATAGTGGGTGGACTGCATGTAGCTTGGTTGATCTAACTGTAGTGGATAAGCATGAT
TTTGGGGGGGCACTTCTAATATCTTGGGAAGATTCGATGTGGGGTAATGACTATGATATGGATGGTTATATCTATTTTGA
ATATTGTACCAAAACTGGTACCGCAAGCCAGGTTCGAACTGCATGTCCAAAAGGATTAAATGAAGATGCACAAGATGAGT
TTGGGAACAATACAAGCCCAAGTGCCGTAATTAATCATTCCAGCGGTGACTTCACAAACACCCATATTTCACATGTTGTG
CCGGAGTGGGATGAAGCTGCGACGGGTGAAATTCAAATCCGATTTGCATTGGTGGCTTCCGCGGGGGGGAACTCGTTGAA
GTTTGGTTATGTTCTTTTGGGGAGTGATGATGATGGGGCGCACGTCAATGAACTTCTCAAAGAAGGTAATGACAATATTG
TATCCACTGCTATTTTTGATGGGCCAGACTCGAATCGAACCATTTGGAGTCGAGATGCTAAAAAGGTAAGAGCTACCCCA
GGAACACCTTCTACACTGGAGAACCCCCTTTGGTATGCTGCAAAATATGGGAACTTTACAGACTTTAATAATTCAAGTAC
GCCTGACTTAACCGGTGAGTGGGATGTTCTTAATGTCGATGGAACCGTGGGTTCTGATGGGATTCCCGATGGATATTTTC
CAGTGTCAAATCCAGCAAATTTACCTACAGCAATTAAGCGTATTTTCGATAATTTAAGCGAGCGCGTTTCTGCCGGTAGC
GCAGCGGCAGTGAATGCTCAAACAGGTAGCGGTGAGGGGGCTGTTTACCAAGCCCTTTATGCTCCTACAGTTGAGGGAAG
TAATGGTGAGGTTAGTTGGGTTGGTTCTATACATTCTTTGTTTATTGACGATCAGGGTAGAATCAGAGAGGACTCCGCAG
CCCCCAAAGCACAGCTCACCGATGCTGATAATGTATTATCTTTTTACTTTGACGATGTGGAGGATGAAACAAAAATTCAA
CGTTATACCGTGGGTGGTGTAGCAGTAGGAGACCCAATAACCTTCACCGATAGTTCATTTAGCCCCATTTGGTCGGCGAG
GGAGCAGTTGGGTGCGGTAACCGATTATATTAGTAACCGAACTTATACATCTAACGCTAGTGACGGGCGCTATATATTTA
CAAGCTTCGACCGAGATGGCGATGGCAATGTAATAAGCCCGGAGTATGAAACAACAAACTCTGGACCAGGTGTAACAGAC
AAAGCCCACGCATTCGTTGCCTCTAACTTTGCTTTATCTGGCAGTACCGCTACCGATCACGGTTATTTAGGTTTAGCTAG
TGGCGTAACTGAAGCGTCAGTTGAAAATTTAATAAACTTTATTCGCGGCCAAGAAGGGTTGCCCAATTCCAGGTCTCGCT
CCATTTATGATGGTGATGGCAATGCAACTAAATATTTAATTGGCGACATTGTGCACTCTACTCCTGCAATTGTAGCGAAA
CCTGCGGCAGGCTACCATTTGACTTATAGGGATAGAACCTATAGGGAATTTGCCGAGCACTATCGCGCTAGGCGCAATGT
TATTTATGTAGGGGCGAACGATGGAATGCTACATGCATTTAATGCTGGCTTTTTTAATTCTACAAATACATCGTTTAGTT
TAACTGACGCTTCAGGTCGTGCCACTCCTCACCCATTGGGCAGTGAGCTTTGGGGCTATGTGCCTTTTAATTTATTGCCT
CATTTACAGTGGTTGAAATCTGAGCTATACCCCCATGTGTATTATATGGATGGTATTGTAAAAACTTTTGATGTAAATAT
TTTTGAAGACGATACTGATCACCCTGATGGTTGGGGCACAATAGTTGTTGCCGGTATGCGTTTTGGTGGCGGTGAATTTT
ATGTAGATCACGATGCCGATGAAGGTGAAACCAACCCAACAGATAGAATAGCTATGCGTTCTGGTTACGTGATTTTAGAT
GTTACAAACCCGGAAGTTGCACCAAAACTTATAGCTGAAATCACGCACCCAGATTTAGGCTACAGTGTTTCAGAGCCTGC
GCTTATAAAGTACAGAATGCCAAATCCTGATACAGGTTCTTACGAGGGTACCTCTCGAAATCGTTGGTACATTGTATTTG
GTTCTGGGCCAGCCGGTGACACCGATGCAGAAAGGCAAGCAGCCCTTGATGAAGCGGTGAGTAGTAAGAGCGCTAAATTA
TTTGTTTTTGATCTTAACAATAAATCTCTTTCTATGAGTGAGTTGACCGATAACAATGGCGACCCTGAATTGGCCAGTTT
TGTGGGCGGTGTAGAGTCGGTAGATTGGACTTCAGATTTTGTTGACGACGCTATTTATTTCGGGCTGGTTTCGGGTGACG
CTGCAACGCCAGGGGGCAAACTCAAGCGTGGTAAATTAAGCTTTTCTGAAAGTGGTGATTTGAATATCGATTTCTCTCGT
GATTTGTTTAATGGCACTAGCTTGGCGTTCAGCGCGTCGCCTCTGGCATTTAGGGATGTAAACAATGACTACTGGGTTTT
TGCTGGGACTGGTAGGTATTATGTCGCAGCAGATAACTTATCTACTCAGCAGCAGTCGTTTTTTGGTATTAAAGAACCGA
AGGCTTCTGGTATAGCTGCTTTGAATACAACTGTGGCAAATGCCAGTTTGGTAGATACGTCGACTGTAGATGTATATACC
GATGGGAGAGTCTTTGACGAAGGTGCCGCTGTTACCCTAACGGCTAATGGTGCCACGCTGGTGCCGGAAACCTTTGAAGA
TGTTCAGGAGTTTATCGGAGCCCACGGAGGGTGGCGGTTTGACTTGTACTATCCTGTTTGGGATATTATTGCGCCGCGTA
TGAGGGTTACAACAAAGGCTGCTATGGCTGGTAACTCTGTTATTTTCACCGCCTATGATGCGACCGGCGAGTATTGTGAT
TCCGAAGGGAATGGTTATTTATTTGCGCCTTATAGCAATGGCGGTGCTCCTGGCCCCTTTGCCCCAGTTGGGACTGATAG
TAGCGATACCATTAGCGCTGCAGTAAGTGGCGACCCGAATGAAGAGCGCGTACTCTGGGGTGTGCCATTGGGTATTGGTG
TTCCTTCTAGCCCAATTGTGACCAGACCAAGTGCGGATTCTGATAGTGGTGATTCGGGGTGTGATGAGTATATGGCGCTA
GTACAAAAGTCGACTGGTGAAATTGTTAATGAAATGCTTGGCTGTGAATCTTACACTTCTGGTCGTCAAAGCTGGCGTGA
AATCCCTGTAACATGGGAAATGTAA

Upstream 100 bases:

>100_bases
AATTACGGCGTACTCAGAAAGTGAGGGCGACCGCGCTCCTATAATGTTGCAATCAACAGTAGTTGTTGAGCTGTAAATGC
AAAGGCTGATGGTGATTGAA

Downstream 100 bases:

>100_bases
TTAAAAGTAGGTTTGTATATGCGAAATTATAGGAATGTTTCAGCTGGCTTTACCTTGATTGAAGCAATTGTTGTTGTGGC
GATTGTTGGAATTATATCAG

Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1714_residues
MQIVKRNRIIKFVNLISKAMLAITASIAINANAQLQTVADFDAIPPTVVDSTTPLVMLVMSRDNQLWHKAYTDYTDLDGD
GTIDTTYNDRFEYYGYFRSDLCYTYANGMFSPAAEVAENSHKCSGQWSGNFMNWLTTTRIDVVRKVLYGGYRSTDTATST
VLQRAFIPADNHAFVKVVDASKIDGVIADYTPITGLSVVSFCNVTDYDVGASDISGDMSAIDNPPKLKMAEGDQKAWSGS
ERNQCQYSGSGGEGGRSQFSPGRPTDSAITSIASDGELIVRVETCSTALDSPDAKSCKEYEDDSGNIVRKPYGILQSYGE
TGEFRFGLMTGSYEKKDRGGVLRKNIALMGGVDAAAADLEIDLETGVFLTKGSGDPGIINTINRLRIQGWDYGDTHYDDC
DTYGLSINNFLSTTASNNRKCKDWGNPISELYVEALRYFAGGSANSAYVTDDGFIPTAAWTDPFSADAPCSKCSIIVLST
GLNNFDGDLYTNALPNLTSIENETDLVGIAEGLNIGQYVVGNATGGTADECDAKSIPSLSAASGPCPEVPRLQGTYKIAG
ASYYAKKTDLRTSLIGEQTVNTYAVSLSETMPSFDITTSSGESVKFVPTCQAHSNGRRRVTDSGWTACSLVDLTVVDKHD
FGGALLISWEDSMWGNDYDMDGYIYFEYCTKTGTASQVRTACPKGLNEDAQDEFGNNTSPSAVINHSSGDFTNTHISHVV
PEWDEAATGEIQIRFALVASAGGNSLKFGYVLLGSDDDGAHVNELLKEGNDNIVSTAIFDGPDSNRTIWSRDAKKVRATP
GTPSTLENPLWYAAKYGNFTDFNNSSTPDLTGEWDVLNVDGTVGSDGIPDGYFPVSNPANLPTAIKRIFDNLSERVSAGS
AAAVNAQTGSGEGAVYQALYAPTVEGSNGEVSWVGSIHSLFIDDQGRIREDSAAPKAQLTDADNVLSFYFDDVEDETKIQ
RYTVGGVAVGDPITFTDSSFSPIWSAREQLGAVTDYISNRTYTSNASDGRYIFTSFDRDGDGNVISPEYETTNSGPGVTD
KAHAFVASNFALSGSTATDHGYLGLASGVTEASVENLINFIRGQEGLPNSRSRSIYDGDGNATKYLIGDIVHSTPAIVAK
PAAGYHLTYRDRTYREFAEHYRARRNVIYVGANDGMLHAFNAGFFNSTNTSFSLTDASGRATPHPLGSELWGYVPFNLLP
HLQWLKSELYPHVYYMDGIVKTFDVNIFEDDTDHPDGWGTIVVAGMRFGGGEFYVDHDADEGETNPTDRIAMRSGYVILD
VTNPEVAPKLIAEITHPDLGYSVSEPALIKYRMPNPDTGSYEGTSRNRWYIVFGSGPAGDTDAERQAALDEAVSSKSAKL
FVFDLNNKSLSMSELTDNNGDPELASFVGGVESVDWTSDFVDDAIYFGLVSGDAATPGGKLKRGKLSFSESGDLNIDFSR
DLFNGTSLAFSASPLAFRDVNNDYWVFAGTGRYYVAADNLSTQQQSFFGIKEPKASGIAALNTTVANASLVDTSTVDVYT
DGRVFDEGAAVTLTANGATLVPETFEDVQEFIGAHGGWRFDLYYPVWDIIAPRMRVTTKAAMAGNSVIFTAYDATGEYCD
SEGNGYLFAPYSNGGAPGPFAPVGTDSSDTISAAVSGDPNEERVLWGVPLGIGVPSSPIVTRPSADSDSGDSGCDEYMAL
VQKSTGEIVNEMLGCESYTSGRQSWREIPVTWEM

Sequences:
NA

Specific function: NA

COG id: COG3419

COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA