| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90022000
GI number:
Start: 2982172
End: 2984727
Strand: Reverse
Name: Not Available
Synonym: Sde_2355
Alternate gene names: NA
Gene position: NA
Preceding gene: 90022001
Following gene: 90021999
Centisome position: NA
GC content: NA
Gene sequence:
>2556_bases ATGAGTAAGCAAAGAATAGTCGTTGTTGGCAACGGCATGGTAGGTCACAAATTTATTGAAAACCTTTTGGCACACGAAAA AGCAGACGATTATGAAATTGTTGCGTTTTCTGAAGAGCCACGTCTAGCCTACGACCGCGTACAGCTAAGCAAATACTTCT CTGGCTCTACCGCCGAAGATTTAATGCTTACATCGGAAGATTTCTACAAAGAAAATGGCGTTAACTACGTTTTAAACGAA AAAGTAACCGCTGTTAAGCACGACGAAAACAAAGTTGTAGTAGCAAGCGGTAAAGAAATCGCTTACGACAAATTAATACT TGCTACTGGTTCTTTCCCGTTTGTTCCACCTATTCCTGGTAAAGATCAGCCGCACTGCTTGGTGTATCGCACCATTGAAG ATTTGGAAGCCATTACTGCATCTGCAAAAGAAAGTAAGGTTGGTGTAGTAGTAGGTGGTGGTTTGCTAGGTTTAGAAGCC GGTAATGCCCTGCAAAACCTTGGTTTAGAAGTTCACGTTGTTGAATTCGCGCCACGCTTAATGGCTGTGCAGTTAGACGA AGGCGGCGGTAACTTACTGCGTAAAAAGATTGAAGCATTGGGTGTAAATGTACACACCGAAAAAAATACTCAAGAAATTG TAGCCGGTGAAACCTGTCGCTACCGTATGAACTTTGCGGATGGCTCGCACCTAGAAACCGATATGATTTTGTTCTCTGCG GGTATTCGCCCGCAAGATGAACTTGCTCGCAATAACGACGTGTTAGAAATTGGTGAGCGCGGCGGTATTGTGATTAACAA CAACTGCCAAACAAACATTGAAAACATTTATGCCATTGGTGAATGTGCATTGTGGGACGGAAAAATATTCGGTCTTGTGG CGCCTGGTTACCAAATGTCTAAAGTGGCTATTTCGCACATCACTGGCGGCGAAGATCAGTTCACCGGCGCAGATATGAGC ACCAAACTTAAGTTGCTTGGCGTAGATGTGGCGAGCGTAGGTGATGCACAAGGTCGCACGCCAGGTTGCTTAAGCTATGT ATACCAAGATGGTGTAGCCGACGTATACAAGCGCATTATTGTAAACGCAGAAAAAACCCGCCTGTTGGGCGCGGTATTGG TAGGCGATGTAGAAGCCTACGGTACATTGCAGCAAATGTACGTAAACGAAATGGATTTGCCAGAAATGCCCGAGGCCATG ATTCTGCCGTCTATTGATGGCAGCGCTGCTTCTGCGGGCATGGGGGTAGATGCATTACCCGAAGGCGCCATTATTTGTAG CTGTAATGATGTTACTAAAGGCCAGATTTGCTGCGCAGTACAAGATGGCTCTGTAACTATTGGCGATATAAAAGCTAACA CCAAAGCGGGTACTAGCTGTGGTGGTTGTGTGGCCTTGGCTACCCAAGTAATGAACTCTGAATTAACCAAGCTTGGTGTA GAAGTAATTACTGACTTGTGTGAGCACTTTGCCCACACTCGCCAAGAGCTACACCACATTGTGCGCGTAGAAAAAATTAA AACCTTTGGCGAGCTTATTGAAAAGCACGGTACAGGTTTAGGTTGTGACATATGTAAGCCTACTGCGGCCTCTATTTTTG CAAGTGTTTGGAACGAATATGTATTAGAAAACCAGCACGCAGGTTTGCAAGACACTAACGATCACTTTATGGCAAACATG CAAAAGAACGGTACTTACTCCATTGTGCCGCGTGTAGCGGGTGGTGAAATTACCCCAGAAAAATTGATTGTGTTAGGTCA AGTTGCTCAAAAATATAAGTTGTATACCAAAATTACTGGCGGTCAGCGTATCGACTTGTTCGGCGCGCAACAGCACGAGC TGCCATTAATTTGGAAAGAGTTAGTAGATGCAGGTTTTGAAACGGGCCACGCTTACGGTAAATCTTTACGTACGGTTAAA TCGTGTGTTGGTTCTACTTGGTGTCGTTACGGCATGCTAGATAGCGTTGGCATGGCTATACGTTTGGAAGACCGCTACAA AGGTTTGCGTTCACCACACAAAATTAAATTTGCTGTTTCTGGTTGCACCCGTGAGTGTGCCGAAGCGCAAAGTAAAGATG TGGGTGTAATTGCTACCGAAACCGGTTGGAGCCTATACCTGTGCGGTAACGGCGGTATGAAGCCTCGCCACGCAGACTTG TTTGCAACCGGCCTAGACGACGAAACCTTAATTAAATATATCGATCGCTTCTTGATGTTTTACGTGCGCACCGCAGACCG CTTGCAACGTACGTCTGTATGGATGGATAACCTAGAAGGCGGTTTAGACTACCTAAAATCTGTAGTTATTGACGATAAGT TAAATGTAAACGCAGAGCTAGAAAGCGAAATGGCATTGGTAATAGATACCTACCAGTGTGAGTGGAAAACAACAATTGAA GACCCAGAGAAACTTAAGCGTTTCCGTACCTTTGTTAACAGCGATGAGAAAGATAACACCGTTGTATTTGTTGAAGAGCG CGAGCAAATTCGCCCGGCAACAGAAGAAGAGCGCGTACGTTTTGTAAATGCCGAAGAAGTGGCTGAAATAGCTTAA
Upstream 100 bases:
>100_bases TTGTTTCTCTTGCAAATGATTTAAACCCCGAATTAAGAGCTGCTGTGTCAGCCGAAACACTGAATCAACACGTGGCCTAA GGCTGAATAGAGGATTTGAT
Downstream 100 bases:
>100_bases GAGAATTTTGGAGAATAAAAATGTCAGATTTAAATTGGGAAACAGTTTGTGATGCCAGTGACCTGCTGCCAGAAATTGGT GCGCGCGCATTGCTAGGTAA
Product: assimilatory nitrite reductase (NAD(P)H) large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>851_residues MSKQRIVVVGNGMVGHKFIENLLAHEKADDYEIVAFSEEPRLAYDRVQLSKYFSGSTAEDLMLTSEDFYKENGVNYVLNE KVTAVKHDENKVVVASGKEIAYDKLILATGSFPFVPPIPGKDQPHCLVYRTIEDLEAITASAKESKVGVVVGGGLLGLEA GNALQNLGLEVHVVEFAPRLMAVQLDEGGGNLLRKKIEALGVNVHTEKNTQEIVAGETCRYRMNFADGSHLETDMILFSA GIRPQDELARNNDVLEIGERGGIVINNNCQTNIENIYAIGECALWDGKIFGLVAPGYQMSKVAISHITGGEDQFTGADMS TKLKLLGVDVASVGDAQGRTPGCLSYVYQDGVADVYKRIIVNAEKTRLLGAVLVGDVEAYGTLQQMYVNEMDLPEMPEAM ILPSIDGSAASAGMGVDALPEGAIICSCNDVTKGQICCAVQDGSVTIGDIKANTKAGTSCGGCVALATQVMNSELTKLGV EVITDLCEHFAHTRQELHHIVRVEKIKTFGELIEKHGTGLGCDICKPTAASIFASVWNEYVLENQHAGLQDTNDHFMANM QKNGTYSIVPRVAGGEITPEKLIVLGQVAQKYKLYTKITGGQRIDLFGAQQHELPLIWKELVDAGFETGHAYGKSLRTVK SCVGSTWCRYGMLDSVGMAIRLEDRYKGLRSPHKIKFAVSGCTRECAEAQSKDVGVIATETGWSLYLCGNGGMKPRHADL FATGLDDETLIKYIDRFLMFYVRTADRLQRTSVWMDNLEGGLDYLKSVVIDDKLNVNAELESEMALVIDTYQCEWKTTIE DPEKLKRFRTFVNSDEKDNTVVFVEEREQIRPATEEERVRFVNAEEVAEIA
Sequences:
NA
Specific function: NA
COG id: COG1251
COG function: function code C; NAD(P)H-nitrite reductase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA