Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90021615

GI number:

Start: 2477202

End: 2480264

Strand: Direct

Name: Not Available

Synonym: Sde_1970

Alternate gene names: NA

Gene position: NA

Preceding gene: 90021614

Following gene: 90021618

Centisome position: NA

GC content: NA

Gene sequence:

>3063_bases
ATGTACACCAAAAAGATCAGTTCCACGGATAAAGAATTCCACGATACACCGCCGCAATTCAAAGCTTTAGACCGCAAGCG
TTTTTTCTACGTCGAATCTCATTTCAAACAGCTCATCACACAAAACGTTCGCGGCCATGCCAATATCGTTTACATCATCG
TCGCCTACGGGTACTTCAAAGCCACGGGTCAATTTTTTAATTCTGCGATCCAGGAAGATGTTGACTATGTAGCAGGCCGA
CTGAAGCTCAGGCAAAGTTTTCGCTGGGAAAGCTACAATACAAGCACCAGAAATCGCCATAGAGAAATGATTCTTGATGC
GCTGGGTTTTAAGCCATTTAATCAAACCACCATTCAACCACTGTTGCCACTGATAAGAACGGACGCACGCTCTCAGAAAA
ACCCCGATAAATGCTTTATTTCCGTTTGCGAATGGCTCTTTGAACACAAAGTCGAGACACCCGATTATAAAACAATTTGT
GACACGATCGAGTCGGTCTATAAAACGCACATCGACCAACAGATTGCCATTGTTAAAAATAAGCTCTCGAACGATGGAGC
TCAAAAACTCGATGCGTTATTTTCAAAAGGAAAAAATACTTATGATGAAATGGAAACGTACAGACTTACGCTGCTGAAGA
AACTTAACCAGTCAACCAAGACGTCTAAAATACGCGAGAATGTCGCAATATACGATACGCTCAAGCCACTCTACGATATT
GCACTTCCAATCTTAAGCGAGCTGGATTTTACAAAAGATGGACTTAAACGCTACGCACTATCCGTTCATCGGCGGCAGGT
TTTTCAGGTTAATCGTTTGAAAGATCATGATCGGCATCTTCACCTTGCCATTTTTATCACTCACCAATTTCAACAGCTGG
TCGATATTCTGGTCGAAACGTTTCTGGCCTCGGTGAAAACAGCAGTGAACAAGGCCGAGAATCTTGCCAAAGAAGAATAC
TACAAACAACGCCAGGAGCAATCTGGCCATACGCAAGCGTTAGTAAAGGATACGGTTGATTTAGTGTCGTTGGTGGAAAA
ACTTAAAGAGACGCTGAACAACCCTATTCTGAGTGATTCAGAGAAAGTCGAAAAAGCGATTCGCTTGATAAGCCCGTCAA
AGATATCCACGGAAAACGTAAACGCTCATGTAAAAGATGTCCAGGAGGACTTAGATAAAATCAGCGGACAGGCTCTTGAA
ATGCTCTTTTTGGAAGAAGGCGCCACGTCGCTTCAGCTCAAGTGTAGCGATATTCTTCGGCGGCTCAATTTCGATTGCGA
CGTGAAAAGCAACAAGCTGCTAAAAGCAATATCGCAGTACCAAGCGAAAAACGGAAAGGTTGATGATACATTCCCAGTCG
GGTTTCTTACGAATTCAGAAACCGGCTACGTTGACACGAAAGACTCCTTCCGCGCGAAACTGTATCGCATTCTGCTTTAT
AAGCACACCGCCGCCGCCATTAAAGATGGCACACTGAGCATTGTTAACTCAAATCGTTACCGACAGCTAGAGCAGTATTT
GATTTCGCGGGAATACTTTCAAAAAAACCGAGATCACATACTAAATTTAGCGGACATGGCTGATTTTAAAGATGTTAAAA
AATTGGTTGAGCACTGGGAACTTGAATTGGATGCGCAATACAAGGAGACGAACGAGCACATACTGGAAAATTTAAACGAA
TATATTGAGACAGACGGTCTTGGCGGATTTAAGCTAACGTACGAACGAAATACTCGGGCAGAAGTCCTGCTAGAAATGGA
AAGTGACGTCGCTCTGTTTCCGGATGATCAATACATTCGAATAGCAGAAGCGCTAAGCACAGTGAATTCCGCTTCAGGGT
TTCTTGACGAGTTTGAACACAACAGTATCCGATACCGTAAGCCCAGACCTGAAGATAAAAATTTCCTGGCGGGAATAATT
GCGCTAGGCGAACACTTGAGCGTGCCAAAATTATCTAAATTGGCGAGAGAGATTGAACTGGCAACTTTGGAATCCACGAC
CAATGGTTTTTTTACGCTTGAGAATTTGAGACGAGCAAATGATGCCGTTATTCGTTTCGTCAATCAACTTCCACTGGCCA
AAGTATTCATTGGAGACTACGGCTTGCAGACGTCGAGCGATGGTCAGAAATGGACGATCGCATATGAATCACTCAATGCA
AATAAATCTTTTAAATACGGCGGACGTGACCCCGTTGTATCGGCCTATACGTTCATAGATATACGAGGGATGTTCCCTTA
CTCAATGGTGATCAGTGGTGCCGAATTTGAAGCGCACTATATGGTGGATGGGTTATTAAAAAATGATGTAGTGAAATCAG
ACCTTCACTCCACTGATTCTCACGGATACACGGAAGCCATATTTGGGCTTACACATTTATTGAAATTTTCTTTTGGGCCA
CGCATAAAAAACCCCGGCAAACGAGTTTTATACTCCTTCAAAACTCCCACTTTCTATAAGAAAAAAAGCTATCCGATCTT
TCCAAAAGAGCGGATTAATAAAGATAAAATTATTGATAATTGGGAAGACGTTCTTCGTTTGTGTGCATCAATAAAGCTAG
GCGAAGTTACGGCGTCTCAAATCTTCAAGCGATTGAACTCATACTCAAAAAACAATCCACTTTACGAAGCACTAAAAGCA
TTTGGAGGTATTCCGAAAACTTTGTTCTTACTCCGGTATGCCGACGATGTGGGTATGCGAAAAGCCATCCACCGCCAGTT
AAATAAAGGCGAGGCAGGGAATAAGCTGGATCGAGCTCTGGCCATTGGACGGGCAGATTATGTGCAGACAATTAAGGAAG
ACCAGGAGATCGCAGAGACCTGCAAACGACTACTTAAAAATGTCATCGTTTGCTGGAATTTTATGTATCTCTCCAAACGT
CTGTCAGAAGCCAAAACAGATGTTGAGTATTCCCTGCTACTAAAAAAGATTAAGGCGTCGTCTATGCTGGCTTGGGAACA
TTTTGTCTTTCATGGCGAATTTGATTTTTCACAGAACTCCCTAAAAGACTCTCAACAGATAGATTTACAAAAAATCCTTG
ATCCAGACCTGATCAAAGAGTGA

Upstream 100 bases:

>100_bases
CTGTAACAAAAAACTAAGTGAGGTAATTTAGAACTTGGGATAGAAGTTTTCAGAAAGGATAATAACACTCCCTTCCATAG
ATTAACATTAGGAGTGTTCA

Downstream 100 bases:

>100_bases
TCGATCATCGCCGTTTTACAGGAGAGTGGCGACACTCTCCTCGTTTTCCCAAATATAACACCGCTTTTGAGCATCGTTCC
GGGAAAAGAAATATCGTTTA

Product: TnpA family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1020_residues
MYTKKISSTDKEFHDTPPQFKALDRKRFFYVESHFKQLITQNVRGHANIVYIIVAYGYFKATGQFFNSAIQEDVDYVAGR
LKLRQSFRWESYNTSTRNRHREMILDALGFKPFNQTTIQPLLPLIRTDARSQKNPDKCFISVCEWLFEHKVETPDYKTIC
DTIESVYKTHIDQQIAIVKNKLSNDGAQKLDALFSKGKNTYDEMETYRLTLLKKLNQSTKTSKIRENVAIYDTLKPLYDI
ALPILSELDFTKDGLKRYALSVHRRQVFQVNRLKDHDRHLHLAIFITHQFQQLVDILVETFLASVKTAVNKAENLAKEEY
YKQRQEQSGHTQALVKDTVDLVSLVEKLKETLNNPILSDSEKVEKAIRLISPSKISTENVNAHVKDVQEDLDKISGQALE
MLFLEEGATSLQLKCSDILRRLNFDCDVKSNKLLKAISQYQAKNGKVDDTFPVGFLTNSETGYVDTKDSFRAKLYRILLY
KHTAAAIKDGTLSIVNSNRYRQLEQYLISREYFQKNRDHILNLADMADFKDVKKLVEHWELELDAQYKETNEHILENLNE
YIETDGLGGFKLTYERNTRAEVLLEMESDVALFPDDQYIRIAEALSTVNSASGFLDEFEHNSIRYRKPRPEDKNFLAGII
ALGEHLSVPKLSKLAREIELATLESTTNGFFTLENLRRANDAVIRFVNQLPLAKVFIGDYGLQTSSDGQKWTIAYESLNA
NKSFKYGGRDPVVSAYTFIDIRGMFPYSMVISGAEFEAHYMVDGLLKNDVVKSDLHSTDSHGYTEAIFGLTHLLKFSFGP
RIKNPGKRVLYSFKTPTFYKKKSYPIFPKERINKDKIIDNWEDVLRLCASIKLGEVTASQIFKRLNSYSKNNPLYEALKA
FGGIPKTLFLLRYADDVGMRKAIHRQLNKGEAGNKLDRALAIGRADYVQTIKEDQEIAETCKRLLKNVIVCWNFMYLSKR
LSEAKTDVEYSLLLKKIKASSMLAWEHFVFHGEFDFSQNSLKDSQQIDLQKILDPDLIKE

Sequences:
NA

Specific function: NA

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA