| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 90021502
GI number:
Start: 2347694
End: 2350645
Strand: Reverse
Name: Not Available
Synonym: Sde_1857
Alternate gene names: NA
Gene position: NA
Preceding gene: 90021505
Following gene: 90021501
Centisome position: NA
GC content: NA
Gene sequence:
>2952_bases ATGACTGCCAGCGCAGACTCGGTAACAAACACTCCCGCTCACCACAAAAGCTTTAACTACATCCGCTCACAGTATGTTGC ATCGCTTAACTTAACCGTGCAGGAATTTGAGCACAAAGTAACGGGAGCCAAACACTACCACTTGGCCGCAGACAACCAAG AAAACGTATTTTTAGTGGCGTTGCGCACCGTGCCACAAGATAGCCGTGGCGTAGCCCATATTCTAGAGCACACCGCACTT TGCGGCAGCGATAAATACCCTGTGCGCGACCCATTTTTTATGATGACGCGCCGCTCGTTAAACACGTTTATGAATGCCTT CACCAGCTCTGACTGGACTGCTTACCCGTTTGCGAGCATGAACAGCAAAGATTACAACAACCTATTAGATGTGTATTTAG ATGCGGTGTTTTTCTCGCGCCTAGACCCTCTCGACTTTGCCCAAGAAGGCCACCGCCTCGAATTCGAAACCGCAGACGAC CCAAGCTCTAAGCTGGTGTACAAAGGCGTTGTGTTTAACGAAATGAAAGGCGCTATGAGCTCGGTCCCGTCGCAGCTTTG GCAAACTCTCACTAAGTACTTGTTTCCAAATAACACCTATCACCACAACAGCGGTGGTGACCCAGAAGCCATTCCCGATT TAACCTACGAGCAGCTGATTACGTTCTACAAAACCCACTACCACCCAAGCAACGCTATTTTCATGACCTATGGCGACAAA CCAGCGGCTGAACTACAAGAAAAATTTGAAACCCAAGCGCTATGTAAGTTTGAACGGTTAGATAAAGAAATTTCGGTGCC CGACGAAAAACGCTACTACGCGCCGGTAAAAGTGCAAGAAAGCTACCCCTACACCCAAGCAGACGCTGCCGACAAACATC ACGTTGTACTGGGTTGGTTATTAGGTAAATCCACCAATTTGCAAGAAGCGCTGCAAGCACAGTTGCTATCAAGCGTGTTA ATGGATAACAGTGCAACTCCACTTATGCACGCACTCGAATCTACCGAGCTTGGCTCTTCCCCCTCGCCCATTTGCGGCCT AGATGATTCGCAAAAAGAACTTACATTTATTTGTGGCTTAGAGGGCTGCCAAGAAGGCAGCGCAGATGATGTAGAGCAAT TAATTGAAAGCACCTTGCGCAAAGTAGCCGAAGAAGGCATTCCACAAGAAGACGTTGAATCTGCACTGCATCAATTAGAA TTACACCAGCGCGAAGTGGGCGGCGACAGCTATCCATTTGGCCTTCAGCTAATAATGACCGCCCTTACCGCGGCTACACA CCGTGGCGACCCAGTAAAATTATTAGATGTTGATGCAGCACTGGATCAGCTGCGTGAAGATATAAAACAGCCAAACTTTA TTAAAACACTTATCGAAAAGTGGCTGCTAAACAACCCGCATAAAGTACGGTTAACGCTTAGCCCCAATGCCGAGCTGCAG GCGCGTAAAGAGCAAGCAGAGCTAGAGAAACTTGCGCAAATACAAGCGAACCTAACCGAAGAAGATAAACAAAACATTGT TGAGTTGGCCCAAGCGCTTAAGAAACGCCAAGACCAAATTGATGACGAAAGCATTCTGCCCAAAGTGACTCTTAGCGATG TACCCGCAGCAGAAGATGCAACCACAGGTGAAACGACCACACTTGCGCCCAACAACCCCACACCCGTTACGCGCTATAGC GCAGGTACCAATGGCCTTGTGTACCAACAATTGATATACCCGTTGCCGCAGTTTTCGCCCGAACAGCTTAACGTATTGCC GCTGTACAACACCTGCATTACTGAGCTTGGGCTCGGTGAAAAAGATTACTTAAACAGCCAGCGCTGGCAAGCTAGTGTTA CAGGCGGCCTTTCTGCTTTTAGCTCAATTCGCGGCGATGTTAACGACCCTCATAAATTAACCAGTTATTACGCGTACTCA GGTAAAGCACTTAATCGCAACCAAGCAGCGCTTAGTGATGTATTAAAAGCATTAATAGAAACGCCACGCTTTGACGAAAC TGGCCGCATTGCCGAATTGGTATCGCAAATACGCGCCCACCGCGAGCAAAGCGTTACCGGCAGTGGCCACAGCTTAGCCA TGGCTGCAGCATCTTCTGGCATTTGCGCTGCGGCTAACTTGCAACATAACTGGTCTGGCTTAGCCGGCATTAAAGCGCTT AAACAGCTGGACGACGGTTTGCGGTCCGAAGGCGGCCTAGAAGCGTTATCAAATTTATTTACCAGTATTCACGAATTAAT TACTGCGTCGCAATTTCAAGCTTTGCTTATTGGTGAGCATGCCCATTTAGACGAGATGCAAGCCCAATTAGCAGCCCGTT TTACAAGCAATACCCAAACCCCAGCTACAGGCTTTGACCTTGGCAAACAAGTTCGCCAAGTTAACGATGCGTGGTTAACC GATTCACAAGTAAACTTTTGTTCTAAAGCCTACGCCACAGTTCCTATGGACCACCCAGACGCGGCCGCACTTGTTGTGCT CGCCGGCGTAATGCGCAATAGTTTTTTACACAAAGCCATTCGCGAGCAAGGCGGCGCATACGGTGGTGGTGCAAGCCAAG ATAGCACTATTGGCGCTTTCCGCTTTTACTCCTATCGCGACCCGCGCTTAGAAGAAACCCTTGCAGACTTTGACCGCAGT GTAGAGTGGGCAATAACCGAGAATCACGATAGACAAAAAGTAGAGGAAGCCATTTTAGGTACTATTGGCTCATTAGATCG CTCCGAGTCCCCTGCGGGTAAAGCAAAACGCTGTTTTTATCAAGAATTACACGGGCGCCCACCCGAAGTACGTCAACGCT TCCGCGAGCGAATTTTAGCCGTTGAAGCCAGTGATTTGCGCCGCGTAGCGGAACTGTATCTAAAACCCGACAATGCACAC ATTGCAGTTGTGACGGATTTCAGTAAAAAAGACAAAATGGAAGCAGCGGGCCTTACAATCCAAACGCTGTAA
Upstream 100 bases:
>100_bases ATTATCACTGACACAGGTTTACATTCCAATCATTGATTCTTATTTCGCGCATAACGCGACACCGTTGCACTTATAATCGC AAGTACACCTAGAGGCCTAT
Downstream 100 bases:
>100_bases AAATATTATTCACGCGCGCCCACCCAAGGGCGCCGTACAAAGGATTGCAATACTAGGAGTATTTTAGATGTATAGCTGCA CCATTCGTCCGCGCTTTAAC
Product: putative metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>983_residues MTASADSVTNTPAHHKSFNYIRSQYVASLNLTVQEFEHKVTGAKHYHLAADNQENVFLVALRTVPQDSRGVAHILEHTAL CGSDKYPVRDPFFMMTRRSLNTFMNAFTSSDWTAYPFASMNSKDYNNLLDVYLDAVFFSRLDPLDFAQEGHRLEFETADD PSSKLVYKGVVFNEMKGAMSSVPSQLWQTLTKYLFPNNTYHHNSGGDPEAIPDLTYEQLITFYKTHYHPSNAIFMTYGDK PAAELQEKFETQALCKFERLDKEISVPDEKRYYAPVKVQESYPYTQADAADKHHVVLGWLLGKSTNLQEALQAQLLSSVL MDNSATPLMHALESTELGSSPSPICGLDDSQKELTFICGLEGCQEGSADDVEQLIESTLRKVAEEGIPQEDVESALHQLE LHQREVGGDSYPFGLQLIMTALTAATHRGDPVKLLDVDAALDQLREDIKQPNFIKTLIEKWLLNNPHKVRLTLSPNAELQ ARKEQAELEKLAQIQANLTEEDKQNIVELAQALKKRQDQIDDESILPKVTLSDVPAAEDATTGETTTLAPNNPTPVTRYS AGTNGLVYQQLIYPLPQFSPEQLNVLPLYNTCITELGLGEKDYLNSQRWQASVTGGLSAFSSIRGDVNDPHKLTSYYAYS GKALNRNQAALSDVLKALIETPRFDETGRIAELVSQIRAHREQSVTGSGHSLAMAAASSGICAAANLQHNWSGLAGIKAL KQLDDGLRSEGGLEALSNLFTSIHELITASQFQALLIGEHAHLDEMQAQLAARFTSNTQTPATGFDLGKQVRQVNDAWLT DSQVNFCSKAYATVPMDHPDAAALVVLAGVMRNSFLHKAIREQGGAYGGGASQDSTIGAFRFYSYRDPRLEETLADFDRS VEWAITENHDRQKVEEAILGTIGSLDRSESPAGKAKRCFYQELHGRPPEVRQRFRERILAVEASDLRRVAELYLKPDNAH IAVVTDFSKKDKMEAAGLTIQTL
Sequences:
NA
Specific function: NA
COG id: COG1026
COG function: function code R; Predicted Zn-dependent peptidases, insulinase-like
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA