Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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The map label for this gene is Not Available

Identifier: 90021223

GI number:

Start: 2024224

End: 2026725

Strand: Reverse

Name: Not Available

Synonym: Sde_1576

Alternate gene names: NA

Gene position: NA

Preceding gene: 90021232

Following gene: 90021222

Centisome position: NA

GC content: NA

Gene sequence:

>2502_bases
ATGAATAGCTCACGCAAACTCCTTGTCGCTTCCTTTATTAGCCTTTTTGCACTTTTAGTTGCCGCGCCCTCCTTCGCCGC
TGGGTTTACCCCGTCAGCAGCGCAAATAGAGCAATTTAAACGCATGTCGCCAGAGCAACAAAAAGCGCTTGCCAGCTCTA
TGGGCATTAACTTAGAAGATTATTCTTCATTAATTGGTGGCGACAGCGCCAGCAGTGCGCAAAATGCAGAAGCCGTGTCT
GGCGTGCGCAAAAAAACGGGCGCAAAAAGCGGCGAGCAAATTATTGAACAAACAGCGCTGACCGGCGTAGACGCACCCAG
CCTAAAAGAAGACGAGAGCGAAGAGTCGACTAGGCAAAAATTAGAGCTTTTTGGTTACGATATTTTCAATTACGGCGCAG
ATTCCTTCACGCCAGCATCGGACATCCCTATCCCCGCAGATTATATTCTTGGGCCAGGCGACAACCTCGTTATACAGCTA
TATGGCAAAGACAACCAAACACTAAACCTCGCTTTAGATAGAGAAGGTCGCATCCAATTCCCGAACATTGGCCCCGTGAA
CCTCGCAGGCCTTACCTTTAGCCAGGCCTCTACTCGTATAGACACTATTGTTAGCGAGCAAATGATAGGCGTAAAAGCCT
CTACCAGCATGGGTAACCTGCGCACCATTAGAGTATTTGTATTGGGCGAAGCCAACGTGCCCGGCTCTTACGTTGTGGGT
TCACTTTCAACCATGACAAATGCTATTTTTGCCAGTGGCGGCATTACTAAAATAGGCTCACTGCGCAATATTCAGCTTAA
GCGCCGCGGCAAAGTAGTAACCACACTAGATTTGTACGACCTGCTGTTACAAGGCGACACCAGCAACGACTCTCGACTGC
TGCCTGGCGACGTTATTTTTATTCCACCAATTGGTAAAACCGTAGGCGTTGCAGGGCAAGTTAAACGCCCCGCCATTTAC
GAAATAACCAAAGAAGCGGATGTGCAAGGCGCCCTGAACTTAGCCGGTGGCCTACTGCCCACAGCCTATATGCCAGCCTC
GCGCATAGAGCGCATTACAGACGCAGGCGAAAAAACCTTAGTAAACCTAGACCTAACCAGTCGCAGTGGCCGTGAGTTCC
GCATTAAAGATGCAGACGTTATTCAAATTCATACCACCCTAGACACCATGCGCGACATTGTAAAACTGGAAGGCCACGTC
AAACGCCCCGGCGGCTTCGCTTGGCGCAAAGGCATTCGCTTTACCGATGTTGTACCTAGCGTGGACGATATGCTGGCCAA
CCCAGATATCGATGTAGGCTTAATTTTGCGCGAAGAAAAAAGCACGCGCAAAATATCTGTGCATTTATTTACACCTGCAA
AAGCGTTCGACAACCCAAACTCGAAGCACAACCCCGAACTGCAGTCTCGCGACACAATCTTGCTATTTGATTATGAAAGC
GACCGCAGCATGCTACTAGAAGACGTACTAGCCCAGTTGCGTACACAATCGAGCTTTACTGAGCGCGAAAAAATTGTAAT
TGCTCACGGCAGCGTGCGCTTCCCCGGCCAGTACCCTATTTCTGAGGGTATGACTACTACCGATTTAATTATGCTCGCCG
GCGGCCTTACTGAGAGCGCACTTGGTAATGATGGTGAAATCACTCGCTACAGCATTGACGAAAACCGCCAAACGCTCGTG
ATGCACATCAACATCGATTTGAATGCACAAGCTTATCCGTTAACTCCGGGCGACACTTTACGCGTTAAGCAGATTCCTCT
GTGGAACGATAAAGAATCGATAGTGTTGCTTGGCGAAGTACTGCACCCAGGCACCTACCCAATTCTGCCCGGCGAATCTA
TAGTGGATGTACTTTCCCGTGCGGGAGGGTTAACCCCACACGCCTACCCAGAAGGCGCTATTTTCTCGAGAGAAGAGCTG
CGCAAACTAGAGGAAGAGCGCTTGGCCGCATTGAAAAATGAAATTGAAGCAGACTTGGCAGCAGAAGCACTGAACGACGG
CATATTAAACAAATCAAAAGTCGATTCAGCGCAAGCAGAGCAGATTATTGCCAATATGGATGCGATTAAGCCAATGGGGC
GTATGGTAATAGACCTTCCTCAAATTTTGGCCAACCCAAAACTCTATGATTTTAAATTAGAAAATGGCGATGTTTTAACA
ATACCGCGCTTTAAACCTTCGGTGACTGTTGTAGGTGAAGTGCAATACCCCACTTCGCACTTTTTCGATAAAAAACTTAA
CCCCTTCGACTACATAGATCGCTCGGGCGGCACCAAAGAAAACGCCGATAAAAAACGCATTTATATTGTAAAAGCCAACG
GCTCGGTTTATTTGCCAGCCAACTCCGGCTGGTTTAAGTCAAAAGATCACAATATTCAGCCCGGCGATACCATTATTGTA
CCCATGGATACCGATCGCGTAGACCCGCTCACCCTGTGGAGCAGCGTTACTACTATTATGTATCAAGCTGCGTTGGGCAT
AACCGCACTTACCAAGCTTTAA

Upstream 100 bases:

>100_bases
AACTAGCATCACCCTCTACCGCACAGAACCACCCACGACCTGAATCATAATCGTGTTAAGCTCCCACGCTGATAACTACC
TAACCAAACGTAACGGATTT

Downstream 100 bases:

>100_bases
AAAAACCTTCATCAAGCGGAAATATTTTACTTTTCTGCTTGATGAACATTATTTACGACTATACAATACGCGCCCTCTCA
CCAATGCCGAGTATGGTACC

Product: ClpX, ATPase regulatory subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>833_residues
MNSSRKLLVASFISLFALLVAAPSFAAGFTPSAAQIEQFKRMSPEQQKALASSMGINLEDYSSLIGGDSASSAQNAEAVS
GVRKKTGAKSGEQIIEQTALTGVDAPSLKEDESEESTRQKLELFGYDIFNYGADSFTPASDIPIPADYILGPGDNLVIQL
YGKDNQTLNLALDREGRIQFPNIGPVNLAGLTFSQASTRIDTIVSEQMIGVKASTSMGNLRTIRVFVLGEANVPGSYVVG
SLSTMTNAIFASGGITKIGSLRNIQLKRRGKVVTTLDLYDLLLQGDTSNDSRLLPGDVIFIPPIGKTVGVAGQVKRPAIY
EITKEADVQGALNLAGGLLPTAYMPASRIERITDAGEKTLVNLDLTSRSGREFRIKDADVIQIHTTLDTMRDIVKLEGHV
KRPGGFAWRKGIRFTDVVPSVDDMLANPDIDVGLILREEKSTRKISVHLFTPAKAFDNPNSKHNPELQSRDTILLFDYES
DRSMLLEDVLAQLRTQSSFTEREKIVIAHGSVRFPGQYPISEGMTTTDLIMLAGGLTESALGNDGEITRYSIDENRQTLV
MHINIDLNAQAYPLTPGDTLRVKQIPLWNDKESIVLLGEVLHPGTYPILPGESIVDVLSRAGGLTPHAYPEGAIFSREEL
RKLEEERLAALKNEIEADLAAEALNDGILNKSKVDSAQAEQIIANMDAIKPMGRMVIDLPQILANPKLYDFKLENGDVLT
IPRFKPSVTVVGEVQYPTSHFFDKKLNPFDYIDRSGGTKENADKKRIYIVKANGSVYLPANSGWFKSKDHNIQPGDTIIV
PMDTDRVDPLTLWSSVTTIMYQAALGITALTKL

Sequences:
NA

Specific function: NA

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA