Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90021216

GI number:

Start: 2012760

End: 2016101

Strand: Reverse

Name: Not Available

Synonym: Sde_1569

Alternate gene names: NA

Gene position: NA

Preceding gene: 90021218

Following gene: 90021215

Centisome position: NA

GC content: NA

Gene sequence:

>3342_bases
ATGCCACGGCCTAACCCGTTTTATGGCCACATGGCCAATATAGATTGCACGGCTAACTACCTACCATATGCCAAGAACAT
ACTATTGGACTTGGATATGACACACGCCATTCGCCCTATTTCGTTATTAAGTATTTTGCTTTGCCTGCCGCTATGGCTAA
CAGCCTGTGGCGGTGAGCCTGTTGGCGGGGTAGATAACGCCCCATTAGTAACAACCGAAACACCGGAAAACAACCAGCCG
AGTACTGGTGAGAGTACTGGTGAGCCAGCCACCGAGACCAACACACAAGAAGAAGTCGACCCGCCTCAACGACCGCCGGG
TGATATTATTTTGGGTAAAACTACCTATACGGGCCAATGTGCCATGTGCCACGGCGAAGCGGGTAACGGGGCTTTCCCAT
TATTTATAAACGCCGTTGAGTTTGAAGCAATAGAAGATGTGACCCATCGCACCATGCCGTTTGGCGACGCAAGTGCCTGT
GAGGGAGAGTGCGCTACCAACGTTGCAGCCTATTTGGTTAGCCTAATTAGCATTAGCCTTCCCGAAACACCAGCCGTAGA
GCCACCAGATAATTCTACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCGAGACCG
AGACCGAGACCGAGACCGAGACCGAGAATGAAAACAACAGCGGTGACCCCAGTCAACCTGTTACACCAGCTTTACCCGCA
CAATGCGCTAATCCGCAGTGGGTTAGCGGCACTGAATATGCTGTAAACACCCTCGTTGTTAACCGCGAAGCCGCGTTCCG
TTGTGTGATAGCTGGCTGGTGCGCAAGCACGGCCAGCTGGGCCTACGAGCCCAACAGCGGCCTGTATTGGGAGGAAGCCT
GGGAGAAAGTCGCACTTTGCAGCGAAAGCACCAGTAACGGCAACACCTCTGGTGAGCCAACCACACCCAATACCGATGGC
GAAGAGCAAACAGAAAATAACGGTGCTGAAACTGGAACTGAAAACGAGACTGAGACTGAAACGGAACCCAACGAAAACGC
CTCTGCCCCTAAAGCAGTAAGCACAGTGATAGCCGTCGCTTCAGCCAATCAAGATCGCATAGGCCTAAGCTGGACAGACA
ACGCAAACAACGAAACAGGTTTTGCAATTCGTCGCAGAACCAATAACGGCGCTGTAGTTCAAATACACAACGCCCCTGCC
AACTCTACAAGCTATACAGATGCAAATGTAAAGCTAGATAACCAATATCAATACGACATTATCGCGTTTAATGCCGTAGG
CTCGAGCGCTGCGGTAGAAAGCAATCAAGTATCGCTAGTAACACCCGTTACGGCACCTAATGCAATCACCAACCTAAACG
CTACATTAAATAACAATCAAATATTTTTAAGCTGGAGCCAAGCAGACGCAACTGCAGACACCATCGCTATTTATCGCACG
CTAGACGATATTCAATGGCAGCAGCTTACTACCGTAGCCGCTAACACCACCCAATATAACGATACCAATATCACAACCAA
CACCACCTATGGTTACCGGCTAGTTGCCATAAATACTGCGGGGGAATCGCAAGCCAGCAATACAGTGCATGTATCTGTTA
CCCCTATTGCAGCTGGGCAAACGCTATTTAACCAGCATTGTGCGGCCTGCCATAGCGCGTCTGGGATTGGCGGTGATTTA
TTTTCAAGCCAAACACAAACTGCATGGCTGAATAAAACATTAAGCCAGTTAGAAACAAAAATTTCGACCATGCCTGCGCA
GCAATGCGACGCCAACTGCCAAAAAGTGGTTGCCGATTTTATTTGGCAAGATAAATGGAACCGCGTGGTAGATATTATTG
AAGAGAAAATTACCAGCTCTGGCGTACGCGGGGTGCGCTTACTTACGCCATACGAATATGCCAACACAATAAAAGCGACG
CTAAACGTTACCGTTAACAGCGAAGACCTACCAAGCGCGCGCTTCGATAGCCACTTTAAATACCCAAGCCAATCGTCGCA
GGGCCTAGTGCTTACCGATGAAGCCGCAGCCTACCAACAACTCGCGCAAGATATTGCAAGTAAAACCACCATAACCAAGC
ACACCTGCAGCACAGCAAGCTGCAGACAAAATGCGGTAAACAAGTTGGGGTTAACACTTTTTCGCAAGCCACTTACCGCT
GCACAAACGGCAAGCTACAGTACATTATTTGAAACCAATGGTTTTGAATCTGTGATTACCAGTATGCTTATGTCCCCCTA
CTTTTTGTACCTAACAGAGTTAGGCAAGTGGGACGCGCAAACCGAAAGCTACCGTTTAAGTAACTACGAAATTGCTACGC
ATCTATCATTTAGCCTTTGGGGTATGCCACCCAACAGCACACTGCTAAATCTTGCAGCCACAGGCACGTTCAGTAGTGAT
GAGGGTGTAAAAAACCAAGCGCAAACAATGGTGAATGACGCAAGGTTCGCTGCACACGTAAGCGAATTTATACGCTACTA
CGCCAACACCTATAGTGTTGTGGACGAAAAACCAGGTTTATCGACCGATGTAATAGCCGCTATGCAACAGGAGCAAACAG
AGGCGATACACTATTTAATTAACGCAGGTTCTGCTTCATTTTACGAGCTACTCAACCCAAGCTACACCTACTTAAACAGC
ACACTCGCCAACCATTACGGTTTAACGTCTACTGCGCAAAACGCTGGTAGCAGTATGCAAAAATATAACGTTAATTCTCT
GCGCGGCGGCCTTATGCATCAAGGTATATTCCAGGTTAGCAATTCAGATTTTAGTGCAACCTCACTGGTTAAACGCGGCA
AGTTTATTCGCGAAAACATGCTCTGCCATATGATGGGCACCCCCTCGGGCGTAGACCCAGACACCATCACGCTACCAGAG
CACCCAATAACAACTCGCGAACGCTGGGATGTAATAACCGGCCCCAATGCAAGTGACGGCCAATGCTGGCAGTGCCACCA
ATTAATGAACGAGCCGGGTAGCGCGCTAGAAAATTACGATCACGCTGGCCGCTACCGCACAGAAGAATCCGCAGCGAATG
ACAGCAGGGTTGCACTAACCATAGATGCTAGCGGTATTCTGCGCGATAACTCAGGCTTTAATACGCTAACCCAATACGCA
GATGCACGAGCACTTAGCGAATACCTTGCAGTTTCAGAGCAGGCACTAAGCTGTTTTGTTGATAACGCCTACCGGTTTAC
CACCGGCCAACAAACGGATGCACAAAGCGAAAATGCAATTAACGCACTGCAACAAGATTTTATTATTGACGGCGATATAA
AAACACTATTTATAGAGCTCGCAAGTAGCCCTGCCGCCCTGTACCGATCTGATAGAGATTAA

Upstream 100 bases:

>100_bases
TTGGAATAAAGGAACCTCTGATTAACCCCAACTGCAAAAAGTAATTGGGGCTAATCAGAGGCTCCTAAAGATAGCGTAAG
ATTACCTAAATATAGCTCAC

Downstream 100 bases:

>100_bases
CCCCATGAAATTATTTAACGCTTCTAACCAAAAGCCCCAACACAATAGCGGCCGCCGCAGTTTTCTAAAAAAACTTATGG
CTACCGGTAGTGGCGCCGCT

Product: helix-turn-helix, AraC type

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1113_residues
MPRPNPFYGHMANIDCTANYLPYAKNILLDLDMTHAIRPISLLSILLCLPLWLTACGGEPVGGVDNAPLVTTETPENNQP
STGESTGEPATETNTQEEVDPPQRPPGDIILGKTTYTGQCAMCHGEAGNGAFPLFINAVEFEAIEDVTHRTMPFGDASAC
EGECATNVAAYLVSLISISLPETPAVEPPDNSTETETETETETETETETETETETETETETENENNSGDPSQPVTPALPA
QCANPQWVSGTEYAVNTLVVNREAAFRCVIAGWCASTASWAYEPNSGLYWEEAWEKVALCSESTSNGNTSGEPTTPNTDG
EEQTENNGAETGTENETETETEPNENASAPKAVSTVIAVASANQDRIGLSWTDNANNETGFAIRRRTNNGAVVQIHNAPA
NSTSYTDANVKLDNQYQYDIIAFNAVGSSAAVESNQVSLVTPVTAPNAITNLNATLNNNQIFLSWSQADATADTIAIYRT
LDDIQWQQLTTVAANTTQYNDTNITTNTTYGYRLVAINTAGESQASNTVHVSVTPIAAGQTLFNQHCAACHSASGIGGDL
FSSQTQTAWLNKTLSQLETKISTMPAQQCDANCQKVVADFIWQDKWNRVVDIIEEKITSSGVRGVRLLTPYEYANTIKAT
LNVTVNSEDLPSARFDSHFKYPSQSSQGLVLTDEAAAYQQLAQDIASKTTITKHTCSTASCRQNAVNKLGLTLFRKPLTA
AQTASYSTLFETNGFESVITSMLMSPYFLYLTELGKWDAQTESYRLSNYEIATHLSFSLWGMPPNSTLLNLAATGTFSSD
EGVKNQAQTMVNDARFAAHVSEFIRYYANTYSVVDEKPGLSTDVIAAMQQEQTEAIHYLINAGSASFYELLNPSYTYLNS
TLANHYGLTSTAQNAGSSMQKYNVNSLRGGLMHQGIFQVSNSDFSATSLVKRGKFIRENMLCHMMGTPSGVDPDTITLPE
HPITTRERWDVITGPNASDGQCWQCHQLMNEPGSALENYDHAGRYRTEESAANDSRVALTIDASGILRDNSGFNTLTQYA
DARALSEYLAVSEQALSCFVDNAYRFTTGQQTDAQSENAINALQQDFIIDGDIKTLFIELASSPAALYRSDRD

Sequences:
NA

Specific function: NA

COG id: COG3979

COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA