Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90021206

GI number:

Start: 2003128

End: 2004723

Strand: Direct

Name: Not Available

Synonym: Sde_1559

Alternate gene names: NA

Gene position: NA

Preceding gene: 90021205

Following gene: 90021207

Centisome position: NA

GC content: NA

Gene sequence:

>1596_bases
TTGATTTCTACCGCAAATATCACCATGCAGTTTGGTGCCAAGCCCCTATTCGAAAATATTTCCGTAAAGTTTGGCGATGG
TAATCGCTATGGCCTAATAGGTGCCAATGGCTGCGGTAAATCCACCTTTATGAAAATATTGGATGGCTCACTTACCCCTT
CGGCTGGCAACGTTTCTATTTCCCCCAACGAGCGCGTGGGTAAGTTAAGCCAAGACCAGTTCGCCTTCGAAAAATACTCT
GTAATCGACACCGTTATTATGGGCCACTCGGAATTGTGGCGAGTTAAGCAAGAGCGCGACCGCATATACGGCTTGCCAGA
AATGAGCGAAGAAGATGGCATGGCCGTGGCCGAGCTAGAAGTGCAATTTGCCGAAATGGACGGCTACAGTGCAGAAAGCC
GCGCTGGCGAAATATTACTGGGTGCCGGTATCGAGCTAGACCTACACTTCGGCCCAATGAGTGAAGTGGCCCCAGGTTTG
AAACTACGTGTATTGTTGGCGCAGGCGCTATTTTCTGACCCCGATATATTGCTGCTCGACGAACCGACCAACAACTTGGA
TATTAATACCATTCGCTGGTTAGAAGGCGTATTGAACCAGCGCGAAAGCACCATGATTATTATTTCGCACGACCGTCACT
TTCTGAACTCTGTGTGTACCCATATGGCAGACATCGACTACGGCGAGTTGCGTGTATACCCAGGCACCTACGACGACTAC
ATGATGGCTGCCGAGCAAGCGCGCGAGCGATTACATTCCGAAAACGCCAAGAAAAAAGCCCAAATTGCCGACCTGCAGCA
GTTTGTGAGCCGCTTCTCTGCCAACGCTTCCAAAGCTAAGCAGGCCACTTCGCGCGCTAAACGCTTAGAAAAAATCAAGC
TGGATGAAGTAAAAGCCTCGAGCCGTGTAAGCCCATTTATTCGCTTTAAGCAAGATAAAAAACTGCACAGACAAGCCGTT
GTTATTGAAAACCTTGCGCACGGGTTTGAAGATAACCCGCTATTTGCCAAAGGTAACTTAATTTTAGAGGCCGGTTCACG
CTTGGCGGTAATTGGCGAAAACGGTGCGGGTAAAACCACCTTTTTGCGTTGCTTAATGAACGAGCTAACCCCGCAAAGCG
GTAAAATCCAGTGGGCAGAAAGTGCAACCTTGGGGTACTGCCCGCAAGATAGCTCCGCGGATTTTGATACCGATTTAAAC
CTGTTTGATTGGATGAGCCAGTGGCGTAAGCCCAGCCACGACGATCAAATTGTGCGCGCAACGCTAGGGCGGCTGTTGTT
TTCTGCTGATGATTTCGCAAAAAAAGTACAGGTGTGTTCCGGTGGTGAGAAAAACCGACTATTGTTTGGTAAATTAATGA
TGCAAGACACCAACGTACTGGTAATGGATGAGCCAACAAACCACTTAGATATGGAATCTATTGAGGCGCTTAACCTTGCA
CTAGAGCATTACGACGGCACCTTGATTTTCGTGAGTCACGATAGGGAATTTGTATCGTCGCTGGCTACTCGCGTAATAGA
AATAAAAGATCAGCAGCTGGTGGATTTCCAAGGTACCTACGAAGAGTACCTAGCAAGCCAAGAAGCACTGGCGTAA

Upstream 100 bases:

>100_bases
AAAATGAGCGCAGCTGTCGACTTGGCGAGCTCAACTCCTTATAGTACGCACCTCCGAGCGCAGCTCGCCTAATACACTTC
TTTATTCTCAGGGTATCCCG

Downstream 100 bases:

>100_bases
GCGTTACCTATTACTAGGCCAGTGGCATAAACAGTGGCATAAAGGTCAACTCAATGTTTAAATTGGGTTGACCTCCTATT
TTCGTCAATTACTTTTCGCC

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>531_residues
MISTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILDGSLTPSAGNVSISPNERVGKLSQDQFAFEKYS
VIDTVIMGHSELWRVKQERDRIYGLPEMSEEDGMAVAELEVQFAEMDGYSAESRAGEILLGAGIELDLHFGPMSEVAPGL
KLRVLLAQALFSDPDILLLDEPTNNLDINTIRWLEGVLNQRESTMIIISHDRHFLNSVCTHMADIDYGELRVYPGTYDDY
MMAAEQARERLHSENAKKKAQIADLQQFVSRFSANASKAKQATSRAKRLEKIKLDEVKASSRVSPFIRFKQDKKLHRQAV
VIENLAHGFEDNPLFAKGNLILEAGSRLAVIGENGAGKTTFLRCLMNELTPQSGKIQWAESATLGYCPQDSSADFDTDLN
LFDWMSQWRKPSHDDQIVRATLGRLLFSADDFAKKVQVCSGGEKNRLLFGKLMMQDTNVLVMDEPTNHLDMESIEALNLA
LEHYDGTLIFVSHDREFVSSLATRVIEIKDQQLVDFQGTYEEYLASQEALA

Sequences:
NA

Specific function: NA

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA