Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90021155

GI number:

Start: 1944846

End: 1947722

Strand: Direct

Name: Not Available

Synonym: Sde_1508

Alternate gene names: NA

Gene position: NA

Preceding gene: 90021154

Following gene: 90021156

Centisome position: NA

GC content: NA

Gene sequence:

>2877_bases
ATGACTAATAAATATACAATCGGTGCATTCGCACTTTCCGCTTTCACCCTGGCTTTTAATCAAGCCGTTTATGCTCAAGA
AGATGCTGCTTTGGAAGAAGTGGTTGTAACTGGTATTCGTGCCAGCTTGGAAGCTGCAGTTGATGCTAAGCGCAACGACG
GTCGAATTGTTGACTCTGTTGTAGCTGAAGACATTGGTAAATTACCCGATAACAATGTTGCAGAAGCATTACAGCGTGTT
ACTGGTGTTTCTATTAACCGCGATTTCGGCGTGGGCTCTGAGGTTTCTATTCGCGGCTTACCGCAGAACCGTGTTGAAAT
TAATGGTCGCTCAAGTGTGGGCGATGGTCGCTCTGGGGTTAGTTTTGATGATTTCCCAGCCAGCTTTTTGCAAGCGGTAG
AGGTTGTTAAGTCTCCTACACCAGAAATGATTGAAGGTGCGTTGGGCGGTACTATCAGCCTTAAAACAGCTCGCCCATTA
GATTTAAAAGAACGCGTAATTGCTGTTTCTTTAGACGCAGAATACGCAGATAAAGCCGATAACTGGGCTCCTATATTTAG
TGGTTCTTTTGGCAACAACTGGGACTTTGGTGACGCAGGTAGCTTTGGTGTAATGGCTAGCGTTGCCTATCAAGATCGTT
GGTTGCGTCAAGATACTGCTTCCGCAAGTCTTTTCCCTTCGGATAAGTGGAGCGCCGGTGTAATTGGGCTAGAAGATACT
CCTGCTCAGAATACGCCTAGCGGCTTGTATATTGTGCCAGATGAGCACAAATTTGAGCCCTTCACTGAGCAACGCGAGCG
TACTGCATTTAACGTTTCCATGCAGTGGGCCCCAGCATCAGAGCAAGGTTCATTCTATATAGATTTAAATAGTACTGAGC
GGGATGGTGGTCAAGAAGCGTATTCTATTCTGTCGGTAATTGGTGCGCCCACAGCAACAGCAAATACGACTGAAGATGCA
AACGGACAGTTAAATAACTACGTATTGGCGGGTTCACTACCTATCCCCAAAACTTGGAGTCAGTTCCGTTTTACAGAGAG
TTTTTCTAACGCAATTGGTGGTGAGTGGAACTTCACTGACAGCTTAAAAGTATCCGGTGAGTACGCCGTAGCTGAATCCG
ATACTATGACGTTAGCTTCGGAAATGAATTTGCGTGCGGTAGACCCCGTTGCTGAGGCGGCAAACCCTGCAGATGCGAAT
CAGTGGTATACCGACGTAACCATCATTAACAGTCAAGACCAGATGCCAACAGTCGATTACTTGGCGGACGGTACCTACAC
TGACGCGAGTCACTTGGCGTTCCGTGAATATCGTCACCGTGAACTCCCAGTTCAAAACAAAGAATCAGCAATGCGCCTAG
ATGTAGAGTACTCTGAGCCATTCGGTTTGGAATGGTTTTCAGCGCTTAAAACGGGTGTGCGCTTCACCGATCGTGAGTAT
GAAAAAGGTGAGTCTCAGATACAGATCAAAGATATTTACAAAAACCTTACCCGTGATGGCAACCCAGATATTATTTGGTT
GAACGATCTGGATAATGTAAAAACTTTTGACTTTGATGATGCGTTTGAGCACGCCGGAGTTCAAGGTGTTAACGATCTGA
CAAGCTTTACAGTGTATGACGCAGCAGCTTTACGTAACCCTGGCCAAACGTATGAAATGGTGCAGAACTTGTTAGCCGGC
ACCAATCTGGCGTTGACTGGAACTCTGCGAGAGAATTTAGATAACGGCGAGTTAAAGGGTTCTTATTCACTTATTGAAGA
AGATACATCTGCGTTTTACGTTCAAGGTAACTTCGACTTTGATCACGCGCGCATCATTGTTGGTGGTCGATATGTGAAAA
GTGAAATCACTTCTACTGCATACAACCAAGAAGGTGACGCTCTTGTAACTGATGGCAATACTTACAGCGATTTCTTGCCT
AGCTTGAACGTAACTGTAGATTTAACAGAAGATACACTCCTTCGCTTTGGCGGTGCTAAAGTAATGAGCCGTCCGAACTT
TGGAGAGCTGAGCCCAACGTTTGTATTTAACTCGGATAAAGTGACTGCAACTCGAGGTAACCCACAGTTAGACCCATATC
GTGCAACGCAATTTGATATGGCGGTAGAGCACTATTTTGGTACCGGTAATATGGTATCGGCCACAGTGTTTTATAAGGAT
GTTGCATCTTTCCTAAGTGAAACAATTTACTGTGCGTACGATGCTGATGCTGTTGCTACACAGAACACTACTATCTTTGA
CAATATTTGTCTGCGAGATGACGCCACTAGCGATAAGCAACAATTAGTGTTTGCTGATAGTCAAGCGGTGTTTGATGCTG
CTCTAGCTCAAGGTCGCAATGGTGTTCGTACTACTACCAACACAAATGGCGAAAGTGGCTATGTACGTGGTTACGAGTTA
GGTTACCAGCAAGCCTTCGACTTTTTGCCTGGCATCTGGTCTGGTTTAGGTGTGAATGCAAACTACACGTATGCGGATAG
TGAGCAGCCAGGTGGTACTCCGTTAGAGGATATCTCTGAAAACACCTACAATACTCAGGTGTACTGGGAATACGAAGACT
TTGCAGTTCGTTTGGCTTATACCTACCGTGATAAGTTCTTGGACGGTATTGTTCACAAGCGTGTTGAACGTGTTGGTGCG
CAGGTTTTACCCTCAGCAACTCGCTCTACCGATCCTACTTTGGGTAACGACTACCGAGATGGTCTGTCTCAGTTAGATTT
ATCTGCAAGCTGGGATGTTACTGATAGTATTACTCTTGTTGCGAACGTAAGTAACTTAACTGGTGAGCCAACTATTAACC
AGGCGGTAACTGGTACCACGTTCCAATTACAAGAGTCTGATCGTCGCTTCTCTTTCGGCGTTCGCGCTAAGTTCTAA

Upstream 100 bases:

>100_bases
ATAAGTTTCATTGGTAAAAATAATCGGTTGACAATTAGGTTTATATTCGTTGTACTTCTGCCCATAATAAAACTAACTCT
TAATGAGGGGGATCTACATA

Downstream 100 bases:

>100_bases
TCGATATTCAGTTATCGACGCTTAGCTGAGGCTGGGTACAATTGCGGTGGAGGGGGTAACCCCGAGAGCTAATGATCGTA
CCCACCTTAAAGCTTAGCTA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>958_residues
MTNKYTIGAFALSAFTLAFNQAVYAQEDAALEEVVVTGIRASLEAAVDAKRNDGRIVDSVVAEDIGKLPDNNVAEALQRV
TGVSINRDFGVGSEVSIRGLPQNRVEINGRSSVGDGRSGVSFDDFPASFLQAVEVVKSPTPEMIEGALGGTISLKTARPL
DLKERVIAVSLDAEYADKADNWAPIFSGSFGNNWDFGDAGSFGVMASVAYQDRWLRQDTASASLFPSDKWSAGVIGLEDT
PAQNTPSGLYIVPDEHKFEPFTEQRERTAFNVSMQWAPASEQGSFYIDLNSTERDGGQEAYSILSVIGAPTATANTTEDA
NGQLNNYVLAGSLPIPKTWSQFRFTESFSNAIGGEWNFTDSLKVSGEYAVAESDTMTLASEMNLRAVDPVAEAANPADAN
QWYTDVTIINSQDQMPTVDYLADGTYTDASHLAFREYRHRELPVQNKESAMRLDVEYSEPFGLEWFSALKTGVRFTDREY
EKGESQIQIKDIYKNLTRDGNPDIIWLNDLDNVKTFDFDDAFEHAGVQGVNDLTSFTVYDAAALRNPGQTYEMVQNLLAG
TNLALTGTLRENLDNGELKGSYSLIEEDTSAFYVQGNFDFDHARIIVGGRYVKSEITSTAYNQEGDALVTDGNTYSDFLP
SLNVTVDLTEDTLLRFGGAKVMSRPNFGELSPTFVFNSDKVTATRGNPQLDPYRATQFDMAVEHYFGTGNMVSATVFYKD
VASFLSETIYCAYDADAVATQNTTIFDNICLRDDATSDKQQLVFADSQAVFDAALAQGRNGVRTTTNTNGESGYVRGYEL
GYQQAFDFLPGIWSGLGVNANYTYADSEQPGGTPLEDISENTYNTQVYWEYEDFAVRLAYTYRDKFLDGIVHKRVERVGA
QVLPSATRSTDPTLGNDYRDGLSQLDLSASWDVTDSITLVANVSNLTGEPTINQAVTGTTFQLQESDRRFSFGVRAKF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA