| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90021063
GI number:
Start: 1834752
End: 1836071
Strand: Direct
Name: Not Available
Synonym: Sde_1416
Alternate gene names: NA
Gene position: NA
Preceding gene: 90021062
Following gene: 90021064
Centisome position: NA
GC content: NA
Gene sequence:
>1320_bases ATGTCAGATTTTATAGCAAACGCTGCGGCCATAGCTGCTTCACCGCTTACATGGTTGCAAGATAAAACACAGCAAGGTAA ACAAGCTTGGCTTGGTCACCGTTTTCCTACCCGTAAAACGGAAAACTGGAAGTACACCAATTTGCGTGCGCTAGAGCAGG GCGATTACTTGCGCGCAGCCAATATTGGGGCGGCGCCAGAAGCGTTGCCGCAGCATTTAACCATTGCCGGTTTAGAGGCT GTTAAACTTGTTTTCGTGAATGGCCAATTTGTTGCCAGTTTATCCGACGATTTAGCGCGCGCCAATGTTGCGGGTTTAGA GTTAACGCTATTTTCCAATGCTAGCGATGCGCAGAAAAAAGCCATTAACGAACAGCTTGGGCAGCTAGTTAATAGTACTA AATATGAATTTTCTGGTTTGAACACGGCGCAACTTAACGACGGCGTGTATATCAATGTGGCTAAAAACCAACAAGTGGCT AAGCCTATCCACATTGTTTGGATGACCACTGCGCAAGACTCTGCCTTTACTGTGCCGCACCGCTTATTGGTAAACCTAGA AACAGGTGCAAGCGCCTGCGTTATCGAGCAGTTTGTAAGTGGCGACGAAGCCCAAAATAGCTTTACCCATAGTGTTTCTG AATTTAACGTAGGCGAAAATGCGCGCTTACAGCACTACCGTTTGCAGCAAGAGCAAGAAGATGCCATTCATATTGGTGGC GTGTTTGTGCGCTTAGATCGCTCTGCAGACTTAGACAGTTTTCATATGGCGTTTGGCAGCAAAATTAAACGCGTAGATAT TGAAGTGCAGCATCAAGGTGAAGGCTCTACCTCTAAAATTAATGGGGTGTATTTGCCAAAAAACAATCAGCATATTGATT ATCACACCTGCATAGAACACGCCGTGCCTCACTGTACTTCACAAGAAACTTTTCGCGGAATTATTGCCGATAGCGCGCAC GCGGTATTTAACGGGCGCATTCATATTCATCCAGATGCGCAAAAAACGCTGGCTGAATTAAGCAATAAAAACTTGTTAAC CAGTGATAAAGCACAAATAGATACCAAGCCCGAGCTTGAGATTTATGCCGACGATGTGCGCTGTGCACACGGTGCCACCA TTGCGCAGCTGGATGAGAAATCTCTTAATTATTTGCGCACGCGTGGCATTTCGCTCGACGAAGCACAAGTAATGCTTAGC TATGGTTTTATTAACGAATTAATTAACGATGTTGCGTTAGAGCCAATTGGTACTTATTTGCGTCCCATTTTGGCCAATCG TTTCGCCAAAGAACCGTCGTTAGTGAGGCACATTGCATGA
Upstream 100 bases:
>100_bases ACGTATTGGCCGACGGCAAAATTGTTAAGTCTGGCGATAAATCACTGGCCCTAGAGTTAGAAGAGAAGGGTTACGGCTGG TTAGAAAACGAGGTTGCTTA
Downstream 100 bases:
>100_bases TGCAGGCTGGCAACGCTGTGAAAGGGTTTGATGTAGAAAAAATTCGCGAAGACTTTCCTATTTTGCATCAAGAGGTGAAT GGTCACCCGTTGGTGTATTT
Product: Iron-regulated ABC transporter permease SufD
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>439_residues MSDFIANAAAIAASPLTWLQDKTQQGKQAWLGHRFPTRKTENWKYTNLRALEQGDYLRAANIGAAPEALPQHLTIAGLEA VKLVFVNGQFVASLSDDLARANVAGLELTLFSNASDAQKKAINEQLGQLVNSTKYEFSGLNTAQLNDGVYINVAKNQQVA KPIHIVWMTTAQDSAFTVPHRLLVNLETGASACVIEQFVSGDEAQNSFTHSVSEFNVGENARLQHYRLQQEQEDAIHIGG VFVRLDRSADLDSFHMAFGSKIKRVDIEVQHQGEGSTSKINGVYLPKNNQHIDYHTCIEHAVPHCTSQETFRGIIADSAH AVFNGRIHIHPDAQKTLAELSNKNLLTSDKAQIDTKPELEIYADDVRCAHGATIAQLDEKSLNYLRTRGISLDEAQVMLS YGFINELINDVALEPIGTYLRPILANRFAKEPSLVRHIA
Sequences:
NA
Specific function: NA
COG id: COG0719
COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA