| Definition | Saccharophagus degradans 2-40 chromosome, complete genome. |
|---|---|
| Accession | NC_007912 |
| Length | 5,057,531 |
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Identifier: 90020903
GI number:
Start: 1606793
End: 1609456
Strand: Reverse
Name: Not Available
Synonym: Sde_1256
Alternate gene names: NA
Gene position: NA
Preceding gene: 90020905
Following gene: 90020902
Centisome position: NA
GC content: NA
Gene sequence:
>2664_bases ATGAACAGTACATCTACCGCTACGCCCATTGCTAACGAAAACCACACCCCTATGATGCAGCAATACCTGCGCATTAAGGC AGAGCACCCCAATGAGATTGTGTTTTACCGTATGGGGGATTTTTATGAGTTGTTTTTCGATGATGCAAAAAAAGCGGCGA AGCTATTAGATGTAACCCTTACCGCACGCGGTAAATCCAACGGCGAGCCTATTCCTATGGCGGGCGTGCCCTACCACGCA GCCGAAAACTATTTGGCTAAGCTTGTGCGTTTGGGGGTTTCAGTTGCCATTGTAGAGCAGGTAGGTGACCCAGCTACCAC CAAAGGGCCGGTAGAGCGCAAAGTTATGCGCATTGTTACCCCAGGCACGGTTAGTGATGAAGCGCTGCTAGATGAAACTC GCGATAACCTTTTGGTGGCTATCACCTTAAAAGATGAGCGCTATGGCATTAGCTCTTTAGATATGGGCAGTGGCCGCTTT ACCGTATTTGAAGTTGCCGACGAAGAGGCATTAATAGGCGAAATTGAGCGCTTACAGCCAGCCGAATTGCTTGCCCCAGA ATTGCTTACCGTACCTAATATTATAAGCTTGCGTGCAGGCTATAGACGCCGCCCAGATTGGGAGTTTGAATACGATACAG CCCAGCGCTTGCTCACCCGCCATTTTGGCACGCAAGATTTAAGCGGTTTTGGTTGCGAAGACTTTACCGCAGGTATTAGC GCCGCGGGGTGCTTATTTGCATATGCACAAGAAACCCAAAAAACGACGCTAAGCCACGTTGCCAAATTAGTATTGGATAA CCCAGAAACCAAAGTAACACTGGATGCAGCAACACGCCGTAACTTAGAGTTAGACACTAACCTAGCCGGCACAGAAGACA ACACATTATTTAGCGTGTTAAATACTACCACCACAGCAATGGGTGGGCGCTTATTGCGCCGCTGGTTACATTCACCACTG CGCGATATTTACATACTTAACCAGCGCCAAAGCGCTATAGAAGCGCTGTTAGATAATTATCAATTTGAACCGCTACGTCA CACCTTAAAACACATTAGTGACTTAGAACGTATTTTGGGCCGCTTGGCTTTGCGCTCTGCTCGGCCGCGCGACTTGTCGC GTTTATGTGCATCTATTGCGGAGTTTCCCGCAATTCAACAGCATTTAAACGGTATTGATAGCCCGCTACTAAAAAAACTA GCAAAAGAAATTCGAGAATTCCCAGACCTAGTTGATTTGCTTAGCCGTGCCTTAATGGAAAACCCACCGGTAGTTATTCG CGAAGGCGGGGTTATTGCAGAAGGGTTCGATGAAGAGCTAGACGAGCTGCGCGCAATTAGTACAAATGCCGGTGATTATT TAATTAAGTTAGAAGAACAAGAGCGTGCTAAAACCGGTCTTTCTACGCTTAAAGTGGGCTACAACCGCGTACACGGTTAC TACATTGAAATTAGTAAATCGCAAGCTAGCTCGGCGCCAACAGAATATATTCGCAGGCAAACACTTAAAAATGCCGAGCG TTTTATTACGCCAGAATTAAAAACTTTTGAAGATAAAGCCTTGTCTGCAAAAAGCCGTGCGCTCGCGCGTGAAAAAGGCT TGTACGATGATCTTATCGAAACCCTCAACGAGCAATTGCGCGAACTACAAGTTGCGGCTTCTGGCGTTGCCGAGCTAGAT GTATTAACCACATTAGCCGAGCGTTCAAACCTATTAAACTTTTGCAAGCCAGAGCTGTACGAAGGCGAAGGCATTTTTAT CGAACAAGGTCGCCACCCTGTGGTTGAACAGGTGTTAGATGACCCGTTCGTACCTAACGACTTACTACTAGATACCGACC AACGGATGCTAATCATTACCGGCCCCAACATGGGCGGTAAGTCGACTTACATGCGACAAACAGCGCTTATTGTGCTGCTG GCGCAAATTGGCTGCTACGTACCGGCCAGCGCTTGCAAGCTGGGCTTGGTAGATCGCATATTTACTCGTATTGGCTCATC AGACGATTTGGCAGGCGGCCGCTCTACTTTTATGGTGGAAATGACCGAAACCGCCAATATTCTAAACAACGCTACCCGCA ACAGCCTTGTGCTTATGGATGAGATTGGTCGCGGTACCAGTACCTACGACGGCCTGTCGCTGGCGTGGGCATGCGTGGAA CATCTCGCTAACAACTTGCACGCATTTACCCTGTTCGCCACCCATTACTTTGAGCTAACCGGCTTGCCGAAAGCATTAGC TGGCGTGCAAAACGTACATTTGGATGCAACCGAGCACAACGACTCGATTGTTTTTCTTCACAAAATACAACCCGGCCCTG CCAGCAAGAGCTTTGGTTTGCAGGTGGCAAAACTAGCTGGTATTCCTTCCAACGTGATTGCCGACGCGGGCGGTCACTTG CGCAGGTTAGAGGCCCAGCCGACGGTAGACACGCCGCACCAATTCCCGGCCCCCGAGCCTATTGCCTTGCAAGAGCCGGT TGCGGAACCAGAACCCAACAAACCAGCTGCTGCTGCCAAAACCAAACCGGCTAGCCCGCAACCCGATTTGTTTGCGAGCG CGGCCCCTTCGGCTGTGGAAATAAAACTGAGAAGCATTAACCCCGATAATTTAACCCCGAGACAAGCTTTACAGGCCTTA TACGATTTAAAAGATATAAGTTAG
Upstream 100 bases:
>100_bases TAACCTTCTATAAATGGCATAATCTCGCGCCTTGGCTTTTTATAGCCCACGCCGTTTCTGGCCACTTTTCATACAACCAG CGAGTTAATCTACAAGCCGC
Downstream 100 bases:
>100_bases AGGTAGAACAGGCGCTGCAAGTATTCCTGAGTGGCGCCTATCCTGTTAGAATGCGCCGCTCATAAAGATAGGAAGAGGTT CCAACAATGACATTCGTAGT
Product: DNA mismatch repair protein MutS
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>887_residues MNSTSTATPIANENHTPMMQQYLRIKAEHPNEIVFYRMGDFYELFFDDAKKAAKLLDVTLTARGKSNGEPIPMAGVPYHA AENYLAKLVRLGVSVAIVEQVGDPATTKGPVERKVMRIVTPGTVSDEALLDETRDNLLVAITLKDERYGISSLDMGSGRF TVFEVADEEALIGEIERLQPAELLAPELLTVPNIISLRAGYRRRPDWEFEYDTAQRLLTRHFGTQDLSGFGCEDFTAGIS AAGCLFAYAQETQKTTLSHVAKLVLDNPETKVTLDAATRRNLELDTNLAGTEDNTLFSVLNTTTTAMGGRLLRRWLHSPL RDIYILNQRQSAIEALLDNYQFEPLRHTLKHISDLERILGRLALRSARPRDLSRLCASIAEFPAIQQHLNGIDSPLLKKL AKEIREFPDLVDLLSRALMENPPVVIREGGVIAEGFDEELDELRAISTNAGDYLIKLEEQERAKTGLSTLKVGYNRVHGY YIEISKSQASSAPTEYIRRQTLKNAERFITPELKTFEDKALSAKSRALAREKGLYDDLIETLNEQLRELQVAASGVAELD VLTTLAERSNLLNFCKPELYEGEGIFIEQGRHPVVEQVLDDPFVPNDLLLDTDQRMLIITGPNMGGKSTYMRQTALIVLL AQIGCYVPASACKLGLVDRIFTRIGSSDDLAGGRSTFMVEMTETANILNNATRNSLVLMDEIGRGTSTYDGLSLAWACVE HLANNLHAFTLFATHYFELTGLPKALAGVQNVHLDATEHNDSIVFLHKIQPGPASKSFGLQVAKLAGIPSNVIADAGGHL RRLEAQPTVDTPHQFPAPEPIALQEPVAEPEPNKPAAAAKTKPASPQPDLFASAAPSAVEIKLRSINPDNLTPRQALQAL YDLKDIS
Sequences:
NA
Specific function: NA
COG id: COG0249
COG function: function code L; Mismatch repair ATPase (MutS family)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA