Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020887

GI number:

Start: 1589672

End: 1592005

Strand: Direct

Name: Not Available

Synonym: Sde_1240

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020886

Following gene: 90020888

Centisome position: NA

GC content: NA

Gene sequence:

>2334_bases
ATGCTTAACCTTAGCTATAGATTCAAATTGTTGTTATTTGTTGTCGGCATCGTGGTGGTGTTAGAAGCCGTTTCTTACAC
CTCTGCACGAACAGTCATTCGCGATGCTGTTACCGAGCAAGCGCGGGAAGACTTGCGCCGGGGCGGTGATTTATTTAGTC
AGTTAATGAATAACCGCGCCCGTCTACTCGCATTGGCTGTTGGCGTAATGGTTGAAGATTTTGGTTTGCGTGAGGCCGTT
GCAATTGGCCACCCTGCAACAATTGAATCTGCATTGCAAAACCACATGGCACGTATCCACGCGGACCTTGCCGTTGTGTT
GGATGGCGAAGGAAAAGTCATTGCCGGTAGTGCGTTAATTCCAAATGCAGACAGTGAATTATTTTCTACGCTGATCGATA
AAAATGGCTATGCGCTCATTTTAGTTGAAGGGCGGCTTTACCAGTTTATGCTGGCGCCAATTTTCGCTCCCGAATATGTG
GGTACCGCAGGGGTTGGTTTTGAAATTGATCAGAGCTTAAGCGTATATTTAAAGCACTTAACTAATTTAGAAGTATCTTT
TGTTCATGTATTGCCGGAATCACTTTTGTATCTGAATGGTACTTTAAGTGAGCAAGAGCAGGTTAGTTTATTGGCCAGTC
GCGACATGGCTATTAACACGGCGGGCACAATTTGGCAGACAGAACATATGTTGGGCAATACTGTCCAGCTTAGCGCCGAA
CCACACAAGATTGTTGCATCGTTACAAATTCCTATAAGTAGTGCCATGCAGCCATTTTCGGTGCTCGATACACAGCTGTT
TGGGCTTACTATCTCGTTTGTGTTTTTTGCTACGTTACTCTCTTTGCTTGTTGCTAGAAGTGCAACCAAACCTATTCAGG
TTTTGGCAGATGCCGCGCGCGATATGGCTGATGGGTTATATGGACGCAGAGTTGTTGTTCATTCTAATGACGAATTTGGC
GAATTGGCAGACGCCTTCAATACAATGCAGCACGCTATCGCCGAGCGCGAGAAAAAAATTGTGTATCAATTGCAGCACGA
TAGCTTAACGGGGTTGGAGAACCGCTCTCAGGTTTTGCCGCAGTTGTCGCGTTTACTTTCGGTTGCCCAGGCTAGTAATG
CATCGCTGGCCGTGCTGGCGGTAGATGTTAATAAATTTACCCAAATTAACGATACGTTTAGCTCGGCAGCAGGGGATGAA
GTGTTGCGTCAGGTTGGTACGCGCTTTCAGCAAATACTACCAACGCAAAGCGTTGTTATTCGCATGGGTAGTGACGAGTT
TTTACTGTTAATTTCACTTGGTGCCGAGAGTGAGATGCTGAGTGTGCAAGAACAGTTGCAGCGCAATTTCGATGAGAGCT
TTTTAATCGAAGGCGCACCCATGCGTATCGATTTAAATATTGGTTATTGTATCTACCCTCAAGCAGGGGATTCGCCCGAG
CTGTTATTAAGAAGAGCAAACCTTGCGCTTAAGCATGCGCAGCAAACGGATGTTTTTATTGCCGAGTACCAGCAGGGCTG
GGATGAAGCACATTTGAAAAACTTGCGCATACTTGGCGAGTTTAATAGTGCGCTCGAAGCTGGGCAGTTGGCTGTTTACT
ATCAACCTAAGGTGGGAGCAAAAGATAAAGCAAAAGTGTGTGCAGAAGCGCTTATTCGCTGGATACATCCAGAGCTTGGC
TTTATTAACCCAGAAACCCTTATTCAACTTTTAGAAAATGCTGGCCAAGTTGGCGCATTAACGCGCTGGGTGTTGAGCCG
AGCCTTAACCAATATGGTTGAGCTGCGCGAGCAGGGCATTGATATTGAAGTGTCTGTAAATTTATCTGCATTGGATTTAT
TAGAAGACGAATTGCCAGATTATGTCGCATCGCTTCTACAAGAACATAATATTGCTGCAGCTAAGCTGTGCTTAGAGGTT
ACCGAAAGCGCTCTAATGCGCGATGCAGAACACAGCCTTGCAAATTTACACCGCTTTAATCGTTTGGGGTGCGCTCTGTC
GGTAGATGATTATGGTACTGGTTATTCGTCTTTGTCTCAGCTTAAGCAGCTGCCGGTGTCGGAATTAAAAATAGATAAGT
CGTTTGTATTGCAATTAGATCAAAACAAAGACGACCAATTTATTGTGCAATCTACAATTGAGTTGGGCCACAGTTTGGGG
TTAAGCGTAACTGCCGAGGGTGTGGAGAACGAGGCTAGTGGTGCCATATTACGGTCTTACGGGTGCGATACTTTGCAGGG
GTATTTTTATAGTAAGCCCGCGCCATTACCTGAGTTTTCGCTTTGGGTTAAAAATTATATTGCGAATGTTCACTCATGGA
GTGCGAATGAATAA

Upstream 100 bases:

>100_bases
GCGTCGACTTGGGCGGGTTAACACCCGACCCGCGCAAGGCAAAGCCTATCTCCGAACTCGATGCGTTGTTTAAGTAATAT
GCTGGCTAAGAGTCAACGCT

Downstream 100 bases:

>100_bases
TAGTATACAGCGTGCCGTGTTTACTTTCTGTGTGGCAGCTTGTTTGGCTGCCAATACGCAAGCCGATCGCCCTGGTAGCC
GGGTTATTGCAACCGGTGCC

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>777_residues
MLNLSYRFKLLLFVVGIVVVLEAVSYTSARTVIRDAVTEQAREDLRRGGDLFSQLMNNRARLLALAVGVMVEDFGLREAV
AIGHPATIESALQNHMARIHADLAVVLDGEGKVIAGSALIPNADSELFSTLIDKNGYALILVEGRLYQFMLAPIFAPEYV
GTAGVGFEIDQSLSVYLKHLTNLEVSFVHVLPESLLYLNGTLSEQEQVSLLASRDMAINTAGTIWQTEHMLGNTVQLSAE
PHKIVASLQIPISSAMQPFSVLDTQLFGLTISFVFFATLLSLLVARSATKPIQVLADAARDMADGLYGRRVVVHSNDEFG
ELADAFNTMQHAIAEREKKIVYQLQHDSLTGLENRSQVLPQLSRLLSVAQASNASLAVLAVDVNKFTQINDTFSSAAGDE
VLRQVGTRFQQILPTQSVVIRMGSDEFLLLISLGAESEMLSVQEQLQRNFDESFLIEGAPMRIDLNIGYCIYPQAGDSPE
LLLRRANLALKHAQQTDVFIAEYQQGWDEAHLKNLRILGEFNSALEAGQLAVYYQPKVGAKDKAKVCAEALIRWIHPELG
FINPETLIQLLENAGQVGALTRWVLSRALTNMVELREQGIDIEVSVNLSALDLLEDELPDYVASLLQEHNIAAAKLCLEV
TESALMRDAEHSLANLHRFNRLGCALSVDDYGTGYSSLSQLKQLPVSELKIDKSFVLQLDQNKDDQFIVQSTIELGHSLG
LSVTAEGVENEASGAILRSYGCDTLQGYFYSKPAPLPEFSLWVKNYIANVHSWSANE

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA