Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020823

GI number:

Start: 1513741

End: 1516074

Strand: Direct

Name: Not Available

Synonym: Sde_1176

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020819

Following gene: 90020824

Centisome position: NA

GC content: NA

Gene sequence:

>2334_bases
ATGAAAATTTTTTCAGTTAAGAAAATGCTGGCCTGTGTTTTTATCGCCACTTTAATTAATGCTTGTGCGGATAAAGACGA
GCCGCAAGCGATAGCTTCCCAGCCTAGTGCCGAAGAGGGCGCCCTCGACAATGTGCTATTAGCAAACATGTTATGGGATT
TTGATTCGGGTGACGTTACGTCTGCAATCCAAACCGAAAATACTACTGTGAAGATTGTGCCCAATTCTTCTGGGCGGGCT
TTGGAGGTAGAGCTACAAACTAAAGCGCATTACTCTGCCAACTTAACCTTTGCCGCCGATGCGCCTTGGGACTGGAGCGG
GCTAGGGAACTTTGCATTCGCTTTGGATATTGCTAACCCCAAACCAACATCCGTTTATTTGCATGTGGTTGCTACAGACA
GCCATGGAAAAGAACGTAAACGTGCCATTGCAATCCCAGGAAATTCCAGTGGTACTTATTATTATGAGCTAAAGGGGCCA
GACGACGGTGTAGAAACCGGTATTCGCTCGAACCCGCCAAGTTGGAACAGTGACTATCAGAATATGATTTATCGCTGGGG
CGATAAGCAGTTGGATGTTAGCTCACTGAAAAGCATCGCATTTACAGTAACCGGCGTACTTGAAAATAAAACACTTATCC
TCGACAACGTACGTTTAATTCAGCCTAAATCGATCGATGAAAACTACTTTAAAGGGCTGGTGGATGAGTTCGGTCAAAAC
GATAAATTAGAATTTGTTAACAAGGTTCAATCTGTTGAGCAATTGCGTAAGTTATCGGAAGAAGAGCAAGCACAGTTGCG
AACAACACCACTTGATGGCCGCTCCATATTTGGTGGATGGGCAGAGGGGCCGAAGCTTGAAGCGACAGGGTTTTTTCGTA
CGCAAAAAGTTAACGGCAAATGGGCGTTGGTTGATCCGAGTGGTTACTTATTTTTCTCTACCGGTATTGCTAATGTTCGC
TTAGCAAACACTTCTACTATAACTGGCTACGATTTCGATCAGTCTAAAATCCCTCAGCGTCAACCTGGTGATTTAACGCC
TGAAGATTCTCTAGGGCTTAACCGTGCGCCGGATGCAGCCCTACCTACAAGGCATATAAGTTCGCCGCTGCGAGCTGAAA
TGTTCACTTGGTTACCTCAATATGACGAGCCGCTAGGGCTTAACTTTGGCTACCGACGCGAAGTGCATACAGGGGCCATT
GAGCGGGGGGAGACGTTTAGCTTTTATCGCGCAAACCTACAGCGAAAATACGGCATAAGTGACGAAGCGGCATTGATGGA
AAAATGGCGAGAAACCACCGTGAATCGTATGCTCTCTTGGGGGTTCACCTCTTTTGGTAATTGGATTGACCCCGCTTATT
ATCAAATGGACCGTATTCCGTACTTTGCGAATGGTTGGATTATTGGAAATTTTAAAACAGTAAGCAGTGGCAATGATTAT
TGGAGCCCGTTGCCAGATCCATTTGACCCGCTATTTAAAGAGCGGGCGTATATTATAGCAGAACAAATTGGCCGTGAGGT
TAAAAATAATCCTTGGTGTGTGGGTGTTTTTATCGATAACGAAAAAAGTTGGGGACAAGAAGGGGCAGTGCAAACGCAGT
ACGGTCTTGTGATTAACACCCTTAGTCGCGCAGCTGAAGATAGCCCAACCAAAGCGCAGTTTGTAATGCTTATGCAGCAA
AAATATGGGGCTATTACCGAACTAAATCGCGCTTGGAATGTTGAGCTAAACAGTTGGCAAGAATTTGCTAATGGTGTTGT
TCTAACCCAATTTAGCGATGCTGTGGTTGCCGACCTCTCTGTTATGTTGGAGCACTACGCCGGCCAATATTTTAAAATTG
TACGCGAAGCAGTTAAGCATTATTTACCAAACCATATGTACCTTGGCGCTCGCTTTGCAGATTGGGGCATGACACCGGAA
ATACGTCGTTCGGCTGCGAAATATGCCGATGTTGTAAGTTACAACTATTACAAAGAAGGCGTAAGTAATAAATTCTGGCA
CTTCTTAGAAGAGTTAGATAAGCCCAGTATTATAGGGGAATTCCATAACGGTGCGTTGGATTCTGGTTTGCTAAACCCCG
GTGTAGTCCACGCAAGCTCTCAAGCTGATCGCGGTAAAAAATATGCTGAGTATATGAACAGCGTGATAGATAATCCGTAT
TTTGTTGGAGCCCATTGGTTTCAGTATATCGATTCGCCACTTACCGGTCGCGCTTACGATGGTGAGAACTACAATGTTGG
TTTTGTAAGTATTACGGATATACCTTACACCTCGCTTGTGGACGCTGCGCGAGAAGTAAATAAAGCACTATATAGTCGAC
GTTTTGGCGAGTAA

Upstream 100 bases:

>100_bases
TGTTTTATGGCCAGCCAATCGCGGTTGTTCTATCCACGCTGTGGTCATTCGCTTTTAGCTAGTGTCTCGTTTAGCCATCA
GACATAAGAATCAGAATAAA

Downstream 100 bases:

>100_bases
TAGCTGCTTATTTACGCAGTGTTAGGCGTTGCATGGGGTGGGGTGATGTTATATGCGGTGAATTTCTATGAAATTTATGC
GTATCACAACCGCATACAAC

Product: agarase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>777_residues
MKIFSVKKMLACVFIATLINACADKDEPQAIASQPSAEEGALDNVLLANMLWDFDSGDVTSAIQTENTTVKIVPNSSGRA
LEVELQTKAHYSANLTFAADAPWDWSGLGNFAFALDIANPKPTSVYLHVVATDSHGKERKRAIAIPGNSSGTYYYELKGP
DDGVETGIRSNPPSWNSDYQNMIYRWGDKQLDVSSLKSIAFTVTGVLENKTLILDNVRLIQPKSIDENYFKGLVDEFGQN
DKLEFVNKVQSVEQLRKLSEEEQAQLRTTPLDGRSIFGGWAEGPKLEATGFFRTQKVNGKWALVDPSGYLFFSTGIANVR
LANTSTITGYDFDQSKIPQRQPGDLTPEDSLGLNRAPDAALPTRHISSPLRAEMFTWLPQYDEPLGLNFGYRREVHTGAI
ERGETFSFYRANLQRKYGISDEAALMEKWRETTVNRMLSWGFTSFGNWIDPAYYQMDRIPYFANGWIIGNFKTVSSGNDY
WSPLPDPFDPLFKERAYIIAEQIGREVKNNPWCVGVFIDNEKSWGQEGAVQTQYGLVINTLSRAAEDSPTKAQFVMLMQQ
KYGAITELNRAWNVELNSWQEFANGVVLTQFSDAVVADLSVMLEHYAGQYFKIVREAVKHYLPNHMYLGARFADWGMTPE
IRRSAAKYADVVSYNYYKEGVSNKFWHFLEELDKPSIIGEFHNGALDSGLLNPGVVHASSQADRGKKYAEYMNSVIDNPY
FVGAHWFQYIDSPLTGRAYDGENYNVGFVSITDIPYTSLVDAAREVNKALYSRRFGE

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA