Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020782

GI number:

Start: 1469959

End: 1471590

Strand: Direct

Name: Not Available

Synonym: Sde_1135

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020781

Following gene: 90020783

Centisome position: NA

GC content: NA

Gene sequence:

>1632_bases
ATGAGCAACAAGTGGATTCTACTAAAAGGCTGCGTGTTAATTGCGACAGCACTATTAATTAGCTGTTCGTCGGTGCCGCA
AACAGAAACCCCTGCAGAGCAAGCGCTGGAAACCGCAAGTGCAACTGGTACAGAGCCCGCCAGCGCCATGCCCGATTCAG
TTACTGCCGCCTTATTTAAAGGAGCAAATAGTCGGCCTCAAATAGAAGAGGAAGAGCGGTTTGATATTTCTGTTAATCAA
GTGCCTGCACGCGACTTCTTTATTGGCTTAGTGGCCGACTCTGGGGTGAATGTTGTCACCCACCCAGAAGTTAACGGCGT
GATATCGCTCGATTTAAAAAACGTAACGCTGCGCAATGTGCTCGATGTTACTCGCGATGTGTACGGTTATGAATACAAAT
ACAACGGCGGCATTTATAGCATTTACCCTAGTAAAATGCGCACAGAATTATTTGAAATAAATTATATAGATGTACAAAGA
GAAGGCTCGACAGATACTAGTGTGCTAATTGGTGAAATAACGTCTAGCGGTGGCAATGGGAGCAATCAGGGCGGTAACAG
TAGCAATCAATCACAGGGTAAGCAGAGTAATCAAGATAGCAGCTCAGGTTCTCGTGTATCGACAAAAAACAAAACAGATT
TTTGGCAAGACTTGAAATTAACCTTATCGGCAATTGTGGGTGGCGAAGCCAATGGCCGCAATGTGGTGGTTAATCCGCAA
GCCGGTTTGGTGGTGGTGCGAGCTTTGCCTAGCGAAATAAGTGCAGTACGAGAATTTCTAGATCGATCTGAGCTTAGTGT
TAGGCGCCAGGTTATTCTCGAAACAAAAATAGTGGAAGTAAAGCTAAACGATGGCTTTCAGGCTGGTGTGAATTGGAATG
AAATTCGCGGCCAAATGCTGCTTACTAAAAATGTAGAAACCTTTGATGTACCTGTAGATATTGTTAGCGCCAGCGAAAAC
GTAGGGGAAATATTCTCATCTATATTTCGCATTGGCGATATCTCACAGTTGCTATCTTTATTAGAAACACAGGGCAACGT
GCAGGTGTTATCTAGCCCGCGCGTGTCGACTGTAAACAATCAAAAGGCGGTAATTCGTGTAGGCTCTGACGAGTTCTTTG
TTACTGGTATATCTAGCCAAACTACTTCTACTGCGGCCTCAACGACCAGCGCCCCCAATATTGAACTTACATCCTTTTTT
AGCGGTATTTCCCTCGATGTTACTCCACAAATTGCAGATAACGGCGATGTGATTTTACATGTGCACCCAATCGTGAGTGA
GGTAACAGACCAAAACAAAGATATAACGCTTGGTAACGAGAAGTTCTCTTTACCGTTGGCGCTGCGCGAAGTGCGTGAGT
CCGACAGTATTGTTCGCGCTCAAAGCGGTCAAATTATTGTGCTTGGCGGGTTGATGAAAGAGAAACTTAACGATGTATAC
AGCAAGCGCCCCGGCCTTGGGGATGTACCTGTACTAAACACTCTGTTTAGAAAGCGCAGCAAGGTTTCAGAAAAAACCGA
ACTGGTTATTTTGCTGCGCCCAATTGTAGTAGAAGACAACACTTTCGCAGATGACATTAATCAAAGTCGTCAGCGTGTTA
ATTCCATGTCAGATGAATACAGAGGCCGCTAG

Upstream 100 bases:

>100_bases
CGCCCATCGGTACGAGATTAATGTTTATGCGTGTTTTGAATTTATATGTTTATCAACCAAAAGCGAACTATTGCGTTTTT
CAGCTTGAGGCGATGTCTTA

Downstream 100 bases:

>100_bases
CGGTCAAGGAGCACCTAGGCATGTACCAGGCGTTCTATCAGCTGGACGAGTTACCTTTTTCGTTAACTCCCGATACGCAG
TTTTTCTTAAACCAACACAG

Product: MSHA biogenesis protein MshL

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>543_residues
MSNKWILLKGCVLIATALLISCSSVPQTETPAEQALETASATGTEPASAMPDSVTAALFKGANSRPQIEEEERFDISVNQ
VPARDFFIGLVADSGVNVVTHPEVNGVISLDLKNVTLRNVLDVTRDVYGYEYKYNGGIYSIYPSKMRTELFEINYIDVQR
EGSTDTSVLIGEITSSGGNGSNQGGNSSNQSQGKQSNQDSSSGSRVSTKNKTDFWQDLKLTLSAIVGGEANGRNVVVNPQ
AGLVVVRALPSEISAVREFLDRSELSVRRQVILETKIVEVKLNDGFQAGVNWNEIRGQMLLTKNVETFDVPVDIVSASEN
VGEIFSSIFRIGDISQLLSLLETQGNVQVLSSPRVSTVNNQKAVIRVGSDEFFVTGISSQTTSTAASTTSAPNIELTSFF
SGISLDVTPQIADNGDVILHVHPIVSEVTDQNKDITLGNEKFSLPLALREVRESDSIVRAQSGQIIVLGGLMKEKLNDVY
SKRPGLGDVPVLNTLFRKRSKVSEKTELVILLRPIVVEDNTFADDINQSRQRVNSMSDEYRGR

Sequences:
NA

Specific function: NA

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA