Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 90020774

GI number:

Start: 1459939

End: 1463568

Strand: Direct

Name: Not Available

Synonym: Sde_1127

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020773

Following gene: 90020775

Centisome position: NA

GC content: NA

Gene sequence:

>3630_bases
ATGTTCGATACGGTATTAATTGCCAACCGAGGAGCAATCGCCACTCGAATTATTCGCACCCTAAAAAAAATGGGTATTCG
AAGCGTTGCCGTTTACAACGAAGCAGATTATCAATCTTTACACGTACAGCAAGCCGATACTGCCATTAGTTTAGGCGCCG
GCAGTGCGGCGGACACTTACCTCAATATAGCCAAAATACTCGATGCTGCTAAGCAAACCGGTGCGCAGGCTGTGCACCCA
GGCTACGGCTTTCTTAGTGAAAATACAGAATTTGTAGGCTTGTGCGAACAGGCAGGTTTAACCTTTATTGGCCCCACGAC
CGAGCAAATGCGTCTATTTGGTTTGAAGCATGTTGCCCGCGAAGCCGCAGAGCAAGCCGATGTGCCTTTGGTGCCCGGCT
CGCCGCTGCTGAGTGAATTAGCCGAAGCATTGGTTTGGGCCAAGGAGGTGGGCTACCCCATAATGCTAAAAAGTACCGCC
GGTGGTGGTGGCATTGGTATGCAGGTGTGCCACAGCGAATCGCAGTTGCAGCAAGCGTGGGATTCGGTTAAACGCTTAAG
CGCGAATTACTTTTCGAACGACGGTGTTTTTTTAGAAAAATACATCGCCGATGCGCGCCATATAGAAGTACAAATTTTCG
GTGATGGCGCCGGTACTGCCGTGGCGTTTGGCGAGCGCGATTGTTCTGCTCAACGTCGCAACCAAAAAGTTATCGAAGAA
ACCCCAGCCCCTAAGTTAAGCGAAGCCGTGCGCGCAGATTTATGTGCAACGGCACAGCGTTTAATGGCGTCGGTCAATTA
TCGCAATGCCGGTACTGTGGAATTTATTTTTGATGCCAAAGAAAATAAGTTTTACTTTTTAGAGGTGAATACACGCCTGC
AAGTAGAGCACGGCGTTACCGAACAAGTGTGGGGTGTAGACCTTGTTGAGTGGATGATAAAACAAGCTGCAGGCGAGCTA
GGTGATATTCAAGCTTTGCATAGGCAATGTAAACCTGCAGGTCACGCGATTCAAGTGCGCGTATACGCAGAAGATCCGCA
ACAAGATTTTAGACCCAGCGCAGGGTTGTTGTCTGCAGTGGCTTGGCCCACTGAAGCAATATTTGCTGCGCCTAGCAAAA
GTAAATTGCGGATTGATCACTGGATAGAATCGGGCGTTGAAGTACCAGCTTTATTTGACCCTATGCTCGCTAAAGTTATC
GTACACAGCGAAAATCGTGAACAGGCTCTAGCAGATTTAAACGCGAGCTTAGCGAACAGTGCAATTTATGGCATAGAAAC
CAATATCGATTATGTGCGGGAAATTCTCGCTACCAGCACATGTAAAAGCGGGCAGTTACTTACCCGCAGTTTGGCCGAAT
TTACATTTAACGCTCACACTTTTACCGTGCTAAATGGTGGCACGCAAACCACGGTACAGGATTACCCTGGCCGCACTGGC
TTGTGGCACGTTGGGGTTCCGCCTTCTGGGCCAATGGATAACCTTAACTTTAGGTTAGCTAACCAACTTGTTGGCAACCA
AGCCGAGGCTGCCGGTTTAGAAATTACCTTAAATGGCCCAAGCTTACATTTTAATACTGCTGCGCATATTGCCGTAACCG
GCGCCGAAGTGCCTGTACTAGTAGATGGCGTTGCGGTTGATATGTACCGGTCTATCGCTGTTTCTGCTGGGCAAACATTG
GAAATAGGCCAAGCCAAAGGCAACGGTGCGCGTGCGTATTTAGCTATTGCTGGCGGTATTCAATGCCCTGAATATTTAGG
CTCTAAATCCACGTTTACGCTAGGCCAGTTTGGTGGTCATGTTGGCAGGGCGCTACGGCCCGGCGACGTGTTAAAATTAT
TGCCTTTAAATAGCGAACAAAAAATTACTGCGCGACAAATTGCACAAGCAGATCGCCCTGCAATTGGCGATACTTGGACA
ATACATGTTATATACGGCCCGCACGGCGCCCCCGACTTTTTTACCGACAAAGATATACAAGCGTTTTTCGATGCCGAGTG
GGAAGTGCACTACAACTCTAGTCGCACCGGCGTGCGTTTAATTGGGCCCAAACCCGAATGGGCGAGAGAGACCGGCGGCG
AAGCGGGTTTGCACCCATCCAATATTCACGATAACGCTTACGCCTTTGGCACAGTGGATTTTACTGGCGATATGCCGGTT
ATATTGGGGCCAGATGGTCCATCGTTAGGCGGTTTTGTTTGCCCAGCTACAATTATTCAAGCCGACTTATGGAAGCTGGG
CCAACTAAAAGCAGGTGCAAAAATTAAATTTGTTGCGGTAACCCACGAGCAAGCCGTGCAGTTAGAAGCCGCACAACATT
GGCAAGTTTCCCAATTGACCTTTCGTGAAAAGCCCATTACTTCTGCGGGTTTGCCTTCACCTATCTTAAAAAAATCGTCG
TTGCTGGGCGAAGATGTTGTTTATCGTTTAGCTGGCGATCACTTTTTACTGGTAGAGCTTGGTCCTCTCGAATTAGATAT
TGCGCGTCGCTTTAAAGTGCATGCGCTTATGTTGTGGATGCAAGATAACCCGTTTACCGGCATGCGCGAACTTACGCCGG
GTATTCGCTCGTTGCAGGTGCATTACGATTCACAGCAGCACGCCGTGGAATGCGTGATAGAACATATTGAGCGTGGTATA
CAAACACTGTTGCAAGCCGACGATTTAAAAGTGCCTGCACGCATAGTGCACCTACCGCTAAGCTGGGATGACGAAGCCTG
CAAATTAGCAATAGAAAAATACACCCAATCAGTACGCCCTGGCGCCCCTTGGTGTCCCAGTAACTTAGAATTTATTCGCC
GTATAAATGGTTTAGATTCAATCGAGCAGGTAAAAGAAATTGTTTTTAATGCTGCGTATTTAGTTATGGGCTTGGGGGAT
GTGTACCTAGGGGCGCCGGTAGCAACCCCGCTAGACCCGCGCCATAGATTAGTAACCACGAAATACAACCCCGCGCGCAC
TTGGACAGCAGAAAACTCGGTGGGCATTGGCGGCGCGTATATGTGTGTATACGGTATGGAAGGCCCTGGCGGCTACCAAT
TTGTAGGGCGTACTTTGCAAATGTGGAACCGCTACCGTCAAACCAATGTTTTCGAAAACCCTTGGTTACTGCAGTTTTTT
GATCAAATTCGTTTCTATGAAGTAAGCAGCGAAGAGCTACACGTTATTCGGCGTGATTTCCCCTTGGGCAAATACCCAAT
AAAAATAGAAAACACCACATTTAGCTTGGCCGATTATCAGCAATACTTAAGCGATAACTCAGCCACTATTGAACGCTTTC
AAGCTGCGCGCGAGCAAGCGTTTGAACAAGAGCTAAACCAGTGGCGAGCAGATGGACAACTTACCTTTGAACAAGCGGAT
GCTGGGCCAGAAGACAATGATGCTAGCACGCCACCCGAAGGTGCTGTGGGCGTTGATAGCCCCGTAAGCGGCAGTGTTTG
GCAAGTACTTAAAAACGAAGGCGATTATGTAGAAAAAGGTGAGGTACTTATGGTGCTGGAATCCATGAAAATGGAAATAG
ATGTCCACGCAACGTGCGCTGGTAAAGTGATAAAAACTCACAAACTACAGGGCCATGCTGTCACGGCGGGGCAAACATTA
TTTTGGATTGCAAAGCAAAGTGAGGCCTAG

Upstream 100 bases:

>100_bases
CTAATTGGCGCTAGCCTGTTGGCGTATGCGCGCTGCTGTTTAGGACGACCTAAGCAGGCTCTCAATGCGGGACGACCCGC
CCCAGTTCGGTATTTAACTT

Downstream 100 bases:

>100_bases
CATGACCGATTTACCGTTAACTATTCAGGCAATAAAAAAGGCCTATGCAGCAAAAACAATATCGCCGCGAGAACTTATTT
TACAACTGCGTAGCCAAGCA

Product: putative allophanate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1209_residues
MFDTVLIANRGAIATRIIRTLKKMGIRSVAVYNEADYQSLHVQQADTAISLGAGSAADTYLNIAKILDAAKQTGAQAVHP
GYGFLSENTEFVGLCEQAGLTFIGPTTEQMRLFGLKHVAREAAEQADVPLVPGSPLLSELAEALVWAKEVGYPIMLKSTA
GGGGIGMQVCHSESQLQQAWDSVKRLSANYFSNDGVFLEKYIADARHIEVQIFGDGAGTAVAFGERDCSAQRRNQKVIEE
TPAPKLSEAVRADLCATAQRLMASVNYRNAGTVEFIFDAKENKFYFLEVNTRLQVEHGVTEQVWGVDLVEWMIKQAAGEL
GDIQALHRQCKPAGHAIQVRVYAEDPQQDFRPSAGLLSAVAWPTEAIFAAPSKSKLRIDHWIESGVEVPALFDPMLAKVI
VHSENREQALADLNASLANSAIYGIETNIDYVREILATSTCKSGQLLTRSLAEFTFNAHTFTVLNGGTQTTVQDYPGRTG
LWHVGVPPSGPMDNLNFRLANQLVGNQAEAAGLEITLNGPSLHFNTAAHIAVTGAEVPVLVDGVAVDMYRSIAVSAGQTL
EIGQAKGNGARAYLAIAGGIQCPEYLGSKSTFTLGQFGGHVGRALRPGDVLKLLPLNSEQKITARQIAQADRPAIGDTWT
IHVIYGPHGAPDFFTDKDIQAFFDAEWEVHYNSSRTGVRLIGPKPEWARETGGEAGLHPSNIHDNAYAFGTVDFTGDMPV
ILGPDGPSLGGFVCPATIIQADLWKLGQLKAGAKIKFVAVTHEQAVQLEAAQHWQVSQLTFREKPITSAGLPSPILKKSS
LLGEDVVYRLAGDHFLLVELGPLELDIARRFKVHALMLWMQDNPFTGMRELTPGIRSLQVHYDSQQHAVECVIEHIERGI
QTLLQADDLKVPARIVHLPLSWDDEACKLAIEKYTQSVRPGAPWCPSNLEFIRRINGLDSIEQVKEIVFNAAYLVMGLGD
VYLGAPVATPLDPRHRLVTTKYNPARTWTAENSVGIGGAYMCVYGMEGPGGYQFVGRTLQMWNRYRQTNVFENPWLLQFF
DQIRFYEVSSEELHVIRRDFPLGKYPIKIENTTFSLADYQQYLSDNSATIERFQAAREQAFEQELNQWRADGQLTFEQAD
AGPEDNDASTPPEGAVGVDSPVSGSVWQVLKNEGDYVEKGEVLMVLESMKMEIDVHATCAGKVIKTHKLQGHAVTAGQTL
FWIAKQSEA

Sequences:
NA

Specific function: NA

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA