Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020740

GI number:

Start: 1398972

End: 1402448

Strand: Direct

Name: Not Available

Synonym: Sde_1093

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020738

Following gene: 90020741

Centisome position: NA

GC content: NA

Gene sequence:

>3477_bases
ATGGTTTATCGACAAGATAAAACAGAAGAAAACTTGCTTCATCGCGGCTTATTCAAGCGCACCGCGCTAGCGGCTTGTGT
GATGGCTTTGTCTTCTTCACCTTCATTTGCTCAGGAAGAGGGTGCAGACTTAGAGGAAGTTATTGTTACAGGCACACGTG
CAAACTTGCAGAATGCGCAAGACATAAAGCGTGAAGCGGATACATTTGTGGATGCGATTTCTGCAAAAGATATCGGTTCG
TTGCCTGATCGAAGTGTATTGGAAGCTATTCAGCGTTTGCCTGGTGTATCGGTAGAGCGCTTCGCTGGGCCTGATGACCC
TGATCACTTTAGTGTGGAAGGTTCTGGTGCTGTTATTCGTGGTATGACTCAAACCCGTTCAGAATTTAATGGTCGCGACT
CATTCACTGCGAACTCTGGTCGAGGCCTTTCTTTCCAAGACGTTTCTCCAGAGTTGATGGGGGGCGTTGATGTATATAAA
AACCAAACTGCAGACATGATAGAAGGCGGTATTGGTGGAACAATTAGCTTAAAGACACGTAAGCCATTTGATGCAGAGGG
TAGAGTTCTTTCGTTTAGTGGCGATATGTCTCGTGGCGATATGGCGAAAGAGTGGACGCCTACCGTTTCCGGTTTATTCA
GTGACCGCTGGGATACAAGTATTGGTGAGTTTGGTTTACTTCTAAATGCTGCCGATTCAAGTTTACGTGGTCGCTCTCAT
GGTATTCAGTCTGATGCATATGTGCAATATAGCGCTGCAGATATTCGCGGGGCTGAAGAGTTTGTTGATGGTGACGGAAT
TGTTTGGATGCCAAACGGTTCAAACTTGCTAGACAAAGATGATGACCGTCACCGTTCCGGTTTTGCTGCAACAGTACAGT
GGGAAAATCCCGATGATACGCTGCTTGCTACTTTTGAATACATTCGATCAGAAGCGACTTTGGCTTGGACTGAGCGGGCT
CTGAAGTATCAGGGCGGTTATTATGATGAAGACGCACAGACAGATATTCGTCGTACGCGTCCTGCGGATGCCTTCATCAA
TAACAACATCCATGGTGTAAACGAAGATACCGAATTCCAATTTTCTAATGACGGTGTTTTTGAAGCGGGCTTCCTAACCG
ATACTGATGGTTGGCGAGTTGCTGATGATAATATCGATCATGTTGCACGTGCATCATGGTCTGATAATGGTCAAGATCAA
TTCGGCCATAAATTCCAAACTGACACTCGTGTTAAAAAAACCAATACCTTAGTGGAAGACTTCTCTATTAATTTGAAATG
GTCTCCAACAGAGCAAATCGATGTTGAGTGGGATGCTCAATACATTCAGGCTGAAAGCCGCGATGATGATGTTGTTGTAA
TGCTTGGTATTTATGCTTTGCAAGATTACGACACGCGTGGTGATACTCCAACGCTAAATATTTACGAGCCTTGGGGTGGT
GTTCGTGATGCTGCTCGTGCATCTGGTGATGACCGTTTTGAAACCTATCCCACAGCAGCCTTTACTGACTATCCAGGGTT
TAGTGGCGATCCAGATGGGGATGCTAACTATTTCCAAGACTCCAATAACTATTGGTGGCGTTCTGCGATGGATCACTATG
AGCGCTCTGAAGGTGATTCGTTTGCAACTCGTTTAGACGGTACTTACCACTTTGAAGATGTTCCATTCGTGCGCTCCGTT
AAGGCTGGCGTTCGCTACGCTAAGCGAGAGCAGTTGGTGCGTGCGACTGGTTGGAACTGGGGTAGCTTAGGCCCCGAGTT
TTCAGGCGGCAATCGTGCACATTGGCTTGCCGAAACTCCTGGTCAGCAGGATGACTGGGAGCTGGTGGATTGGAGTGATT
TCCACGGTGGTGGTGTGGCGAATATCCCTGGTGGGCAGTTAGCTCACGCTTCTGAGGATTTCGTTAAGAGTTTGGTTGCT
GGTCGCGGCGGTAGTGCAGAATTAAGTGATGCTGGTAATTGGCAACCTTATCAAGATCGTTCAAATGTTGATGATGAATA
CGGTCTGTTTTCTCCCGGTGAAATTTATAAAACAACTGAAACTAACAATGCGGCATACGTAAGAGTTGATTTTGGCTCTG
ATGACTTTGCAATGCGTTTCAGTGGTAACGTGGGGTTGCGTTACGTGTCTCTAGATCGCGAGGCCCAAGGCTCCATTCAA
TTCCCAGATTTAGTACCCGACCATGCAGTTCCTTCTGATTGGTCTATGCCTTTAGATCGTGACGCAGTAGTTGCTTTTGT
TGATACAGAGGTTGCGGCAACAGGCGTGATGGATAACATTCCAGACCCTGGTAATGACCCAGATTCAGCTGAGTGGCAAG
AGTATGAGGACCGTGTAGTAGCGATTGATCAAGAGTACGCTGCTGTTTTATCTGCGAACGAATGGATTGGTGATGCTCGA
AATTGGTTGACTCAAGAAGAGCGCAATTTTGGTAACGATCAGGAAGTGCTATCTGTTCAAGAAGCCAGCTTTGATATGTT
ACTTCCTAGTTTGAACCTTAAAGTTGAAGTAACTGACGATCTCGTAGCTCGATTTGCAGTGTCAAAGGCCGTTGCGTTGC
CTGATATGGAGCAAGTTAAAAATCAAGCTGCTCTGGGTAACTTGGAGGTTCAGGAAAGCAGATACGAAGTACCTAATCCC
GATCCAGATGCTGCGCCAGAGCCTACCCCTATTCGAACAGCAGACCTTCGTTTGCTAACCGAGGCGTACGTGCCTGGGTG
GACAGGAGATGGTGGTAACCCACAATTGAAACCAATGGAAAGTGTTCAATGGGATTTATCGTTGGAATGGTATTTCAGCG
ATGTAGGCTCTTTGACAACAAGTCTATTCCATAAAGATTTGGAAAACTTCTTTATCTCTGGGGCATTTCCTAAGTCTTAT
ACCAATCCATCGGGTGTGTCGCAGGTTGCTGACGTAACTCATACTATTAACTCGGGTACGGGTAAAATGGATGGTGTAGA
AATAGCTTATCAGCAATTCTACGATATGCTACCAGAGCCATTTGATGGATTCGGTATACAAGCTACTTATACTTACATTG
AGGCAAGTGGGATTCCTAATAATCAGCTTTCGCCAGATGAGGATGGGTTCACCGATACGGTGAATGACACAGGTGCTCGG
GTTGCTCTCGAGGATGTGCCTTTGCAAGGGCAGTCTAAGCACACCGCTAACTTCGTGTTAATGTATGAGAAGTATGATTG
GAATGCTCGTTTAGCGTATAACTGGCGTTCTAAGTATTTGCTCACCACCCGCGATGTGATCAGTAAGTACCCATTATGGT
ATGACGATCATGGCCAACTTGATGGTTCTGTCTTTTACGACGTGAATGATAACGTAACCGTGGGAGTTCAGTTGAATAAC
ATCACTAACTCTCAGTCTGAGACGATCATGATTCTTGACGGCAAAGGAACTGAGGCGGGGCGCTCATGGTTTGTGCAGGA
CCGCAGAGCCTCCTTGGTGGTACGAGCTAATTTCTAA

Upstream 100 bases:

>100_bases
ATCGAAGTCGTTTTTAGATGGTTAAGGTCGCGTTTTTTTCATTCACTTTAGAATTTTTTCAACCAAAAAAATCAACCTAT
AATAACAACGGGGAATATCT

Downstream 100 bases:

>100_bases
GAAAATAGCTCTACAAAGCTAAGTAATGCGCATAGTGAAAGCTGTGCGCATTTTTTTTGTGCTAAATATAGCAAAGCCGC
TTTAATTTAATTGGCCAAAG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1158_residues
MVYRQDKTEENLLHRGLFKRTALAACVMALSSSPSFAQEEGADLEEVIVTGTRANLQNAQDIKREADTFVDAISAKDIGS
LPDRSVLEAIQRLPGVSVERFAGPDDPDHFSVEGSGAVIRGMTQTRSEFNGRDSFTANSGRGLSFQDVSPELMGGVDVYK
NQTADMIEGGIGGTISLKTRKPFDAEGRVLSFSGDMSRGDMAKEWTPTVSGLFSDRWDTSIGEFGLLLNAADSSLRGRSH
GIQSDAYVQYSAADIRGAEEFVDGDGIVWMPNGSNLLDKDDDRHRSGFAATVQWENPDDTLLATFEYIRSEATLAWTERA
LKYQGGYYDEDAQTDIRRTRPADAFINNNIHGVNEDTEFQFSNDGVFEAGFLTDTDGWRVADDNIDHVARASWSDNGQDQ
FGHKFQTDTRVKKTNTLVEDFSINLKWSPTEQIDVEWDAQYIQAESRDDDVVVMLGIYALQDYDTRGDTPTLNIYEPWGG
VRDAARASGDDRFETYPTAAFTDYPGFSGDPDGDANYFQDSNNYWWRSAMDHYERSEGDSFATRLDGTYHFEDVPFVRSV
KAGVRYAKREQLVRATGWNWGSLGPEFSGGNRAHWLAETPGQQDDWELVDWSDFHGGGVANIPGGQLAHASEDFVKSLVA
GRGGSAELSDAGNWQPYQDRSNVDDEYGLFSPGEIYKTTETNNAAYVRVDFGSDDFAMRFSGNVGLRYVSLDREAQGSIQ
FPDLVPDHAVPSDWSMPLDRDAVVAFVDTEVAATGVMDNIPDPGNDPDSAEWQEYEDRVVAIDQEYAAVLSANEWIGDAR
NWLTQEERNFGNDQEVLSVQEASFDMLLPSLNLKVEVTDDLVARFAVSKAVALPDMEQVKNQAALGNLEVQESRYEVPNP
DPDAAPEPTPIRTADLRLLTEAYVPGWTGDGGNPQLKPMESVQWDLSLEWYFSDVGSLTTSLFHKDLENFFISGAFPKSY
TNPSGVSQVADVTHTINSGTGKMDGVEIAYQQFYDMLPEPFDGFGIQATYTYIEASGIPNNQLSPDEDGFTDTVNDTGAR
VALEDVPLQGQSKHTANFVLMYEKYDWNARLAYNWRSKYLLTTRDVISKYPLWYDDHGQLDGSVFYDVNDNVTVGVQLNN
ITNSQSETIMILDGKGTEAGRSWFVQDRRASLVVRANF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA