Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020680

GI number:

Start: 1321308

End: 1323032

Strand: Reverse

Name: Not Available

Synonym: Sde_1033

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020681

Following gene: 90020679

Centisome position: NA

GC content: NA

Gene sequence:

>1725_bases
ATGATTGATCCTTTTTTAATTAAAAAAACCACCAAAAAATTTGACGCTATTGTTGTCGGCTCTGGCATTTCTGGTGGATG
GGCTGCCAAAGAACTGTGTGAGCGCGGCTTAAAAGTTTTGCTGGTAGAGCGCGGCCGCGCAGTGCGCCACCAGAAAGATT
ACGAAGGCGAATTTAAAGCACCGTGGGACCTGCCACACAGGAACCAAGTGGATTACAAGTTAGTACAAGACCAGCATCAC
GTGCAACGCAAGTGCTACGCCTTTAATGATGCGACCAAACACTTTTTTGGCAACGACCGCGACTACCCCTACATAACCAA
AGAGGGCACAGGCTTTGATTGGATACGAGGCAATCAACTCGGTGGCCGCTCATTGCTATGGCACCGTCAATCCTTCCGCT
GGGGAGAAATAGACTTTGAAGAAAACCTGCGCGACGGCAACGGTTGCGACTGGCCAATTCGCTATAAAGACTTAGAACCG
TGGTACTCCCATGTAGAAAAATTCGCGGGTATTTCAGGTAGCGTAGAAAACATACCCACCTTGCCCGATAGCGAATTTTT
GCCACCGTTTGAGATGAACGCTGCCGAAAAATATGCAAAAAAAGCTATCGAAAAAAAATACCCTCATATGAAATTCATAC
AGGGTCGCTGTGCGCACTTATCTGAGCCCACCCAATTTTTTCTAGATCAAGGCCGCGGTAAATGTATGGCCCGCAATCAG
TGCCAGCGCGGCTGCTCTTTTGGTGCATACTTTTCTACCCTTAGCTCCACGTTGCCTGCGGCGATCAAAACAAACAACTT
AAGCATTGCCTGCAACAGTGTTGTACACAGTGTTATTTACGATGAGAAAAGCGGCAAAGCAACCGGTGTAAATGTAATAG
ACGAAGAAACATTAGAAACTCGCGAATATTACGGCGGCATGATTTTTCTGTGCGCCTCAACACTTGGCACCACCCAAATA
ATGCTTAATTCTAAATCCAAAGCTTTTCCAAATGGTATTGCCAACTCTTCGGGCGTGCTCGGTCACTACTTGATGGATCA
CATTTATAATTCTAGCGCTTACGGTGTGTTAGAAGGCTTTGAAGATGACTACTACAAAGGGCAGCGCCCAACAGGCCCTA
TTATTCCTCGGTTTAAAAACTTAAAGAAAAATAGCGAGAAGTTTAATCGCGGTTATTTTTTACGCGGCGGCGCGGTTCGG
CCAGTTACCTATAGCTCCCCCGATGACAAAACCTTTGGCGTGGAATTAAAAAACAAGCTACAAAAACCAGGGCCTTGGAT
TCTTCATTTCGGCGGCTCAGGCGAAATGACACCCAAGTACGAAAACATGGTTAGCTTACACCCAACCAAAACCGACAAGT
GGGGCATTCCACTATTAGTTTTCGATTGTAAATTCACCGAAAACGACAAGCTGATGATGGAAGACATGGCCGATACTGCT
GCAGAAATTCTCACAACAATTGGCTGCAAGCATGTCACTAAAGATATTAGCGATGCGCCCCCCGGCTTAGCCATTCACGA
AATGGGCACCGCACGCATGGGCCGCGACCCCAAAACCTCGGTATTAAATGGCAACAACCAATGCCACGATGTACCCAACC
TATTTGTAACAGACGGTGCATGTATGGCCTCTACTGCTCACCAAAACCCATCACTTACCTATATGGCAATTACCGCGCGC
GCAGCTGCCTTTGCTGCAGAGCAATACAAAAATAAAGCGCTCTAA

Upstream 100 bases:

>100_bases
ACTCTCTGAAAACGGTGGTAAGGCATTTATGCCGCACCAAATCTAACCTCACCACCTTTAAGCTTATTGAACCATTATTT
GTTTTGGCAAAGGCACGCAC

Downstream 100 bases:

>100_bases
CATTCCCGCCTAATATTCTGCCGCGTCACTTTACCAAACCTAGCGTAAAGTGACGCGCCCTAGCTATTACTAACAGATAA
AAACATACTAGTGCTTGCAC

Product: putative oxidoreductase chain

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>574_residues
MIDPFLIKKTTKKFDAIVVGSGISGGWAAKELCERGLKVLLVERGRAVRHQKDYEGEFKAPWDLPHRNQVDYKLVQDQHH
VQRKCYAFNDATKHFFGNDRDYPYITKEGTGFDWIRGNQLGGRSLLWHRQSFRWGEIDFEENLRDGNGCDWPIRYKDLEP
WYSHVEKFAGISGSVENIPTLPDSEFLPPFEMNAAEKYAKKAIEKKYPHMKFIQGRCAHLSEPTQFFLDQGRGKCMARNQ
CQRGCSFGAYFSTLSSTLPAAIKTNNLSIACNSVVHSVIYDEKSGKATGVNVIDEETLETREYYGGMIFLCASTLGTTQI
MLNSKSKAFPNGIANSSGVLGHYLMDHIYNSSAYGVLEGFEDDYYKGQRPTGPIIPRFKNLKKNSEKFNRGYFLRGGAVR
PVTYSSPDDKTFGVELKNKLQKPGPWILHFGGSGEMTPKYENMVSLHPTKTDKWGIPLLVFDCKFTENDKLMMEDMADTA
AEILTTIGCKHVTKDISDAPPGLAIHEMGTARMGRDPKTSVLNGNNQCHDVPNLFVTDGACMASTAHQNPSLTYMAITAR
AAAFAAEQYKNKAL

Sequences:
NA

Specific function: NA

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA