Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020307

GI number:

Start: 837361

End: 839928

Strand: Direct

Name: Not Available

Synonym: Sde_0660

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020306

Following gene: 90020309

Centisome position: NA

GC content: NA

Gene sequence:

>2568_bases
GTGGTAAAAGCTGTGGTTGGAGCGGGCTTGGGTGAACAGCCCGTGGATATTGCTGTACTTAGCCAAGCCGGCGACGTTGT
ATTTGTAAGCAAAGGCTGGCTTGCAGGCTTGCCCCTATTCAGCGATCAGGCAAGTGCGGTAGGTGAGCTAAAAGCACCTA
AAATTGACTGGGTTGGCAATAACTTTTTCGCACTGTGTCGTGAGTTTATTGGCCCAAGTGTACAGTGGGTGGCGAAATCT
TTTGGTGCGCAAGAAAATAGCTTAACCGATCACATCGAGGCGATGCTCGAATTGGTATTAAATGGCGCAGATACGCAGCA
TTGTTTTTACGCAATTGAAAAAAACGGCGTGCTTCAACATTATGAGCTTACCGCAGAGGCCTGCAGTAATACGGCGCTGG
GGGCGGTTATCCGCCATCGAGCTCGGTCTAATTCAATTTTCCTGGCTGCGGGTATACCGCTAGATAGCAACTTCTACGAA
GCGTTGTTCAACAATCTAGTAGACGGCATTATTTATCAAAACCTAGAGGGTTATATAGAGCTGGCGAATGAGGCCGCCCA
AGAAATACTCGATTTTAAATTCGAAGGGAATAATCCCGATGAGCCAAATAAACAGTCGTTATTATCCGATTACTGGACGT
TTTTAAATGAAGATGGCCAGAAGCTTTCACTTGCGGATAACCCCATTCTGCGCGTGCTAACAAAAGGCGCGGGGCTGCAA
AACCTCACTTTGGGGGTGGTGCGCCCAGATAAAGAGTTGGTGTGGCTAAAACTAAACGTTGCCATTATTAATAGCCCCGA
TACCAATATTCCCCACGGTGTGCTCATTTCTTTTGTGAATATTACTGCAGAGACGGAAGCGCATACCGCATTAGAGAAGG
CTTCAGAACGTTTGCGTTTGGCGCTAGATGGGGCGTCGATTGGTATTTGGGATTGGTATATCTCCGACGCAGAAATGATT
TGGGATGACCAAATGTACCGCCTTTATGGCATGGAGCCACGTCAGTACATATCTGTAAGAGAGGCGTGGGAGCATGTAGC
CCACCCCGATGATAACCAGCGCGTGCTGGACGAGCTTGGTGAGTTACTTAAAACCAAGAAAGATACTATAAGCGAATTCC
GCGTATTATTGCCCGATAAATCTATTCGTCACCTGCGCGCCTATGCGCGTGCAGTGCTGGACGAAGACGGCCTCGTGCAG
CGGGTAGTTGGGATGAACTGGGATGTAACCAAAGAAGTGGAGGCCGAAGAGCGCTTGGCGCATATTGCCTTTACTGATGA
GCTTACCTCACTGCCTAACCGGTTAGCGTTTAGCAAAAAACTAAAAAACACCATGAAGCTTGCCGAGAAATACCACGGCA
AGGTGGCAATGTTAATTGTAGATTTAGATCACTTTAAAGATATTAATGATAGTTACGGTCACCCAGTGGGCGACTCACTA
ATTTGTGAAGTTGTTACGCGTTTAAAAGAAGTGCTTGTGGGTGATGAGTATTTGGCGCGCATTGGTGGCGATGAATTTGC
GCTTATTTTAGATAACGTACGTTCACATGATGCCGCCTTGCATTATAGCCGGCGCATTCAGAAAATAATGGCCGAGCCTA
TTTATCTAATGGAAGGGCCTGTCGTTAATGCGCGGGTTTCCATGGGGGTGGCACTGTTCCCCGATGACGGTGAGGATGCA
GTTGCCCTTATTAAAGCTGCAGATCTGGCCATGCATCAGGCCAAAAAAAGTGGTCGCAATACGGTATTGCCATACAAGCA
AGAGTACTCTTCGTCGTTAGAGAAAAAAATATTCTTGGAAGAAGAGCTGCGCTCTGCCATTCGCGACGAAGAATTAATGC
TGTATTACCAGCCCATTATTGATTTAAGCACAGAAAAAATCGTGGGCTGTGAAGCTTTGTTGCGCTGGATAGATCGCGCA
GGCAAGTTCGTCTCGCCGGTAGATTTTATTCCCGTTGCCGAAGAGAGCGGCCTAATTTACGAATTGGGCAACTGGATTAA
TGCCACCGCCTTTAAACAGCTCAAGCTATGGCAAACCTTGCATACCGATATGAAATACATTTCGGTGAATGTTTCGCCTC
ACCAGTTGCAAAACGCAGACTTTGTAAAAGATATTCAGCGCTTACTCGATATACACAATGTTGATCCACGCCATATTCAG
CTAGAAATTACCGAGGGAACGTTTTTACAAGAGTCGCTAAATACCCAAAGCCAATTGCGCATACTTGGCGAGATGGGTTT
TAGGTTGGCTATTGATGATTTTGGTACGGGTTATTCGTCGCTAGCGTATTTAAAACGCTTTGCGGTAGATGTAATTAAAA
TTGATCGCAGCTTTGTTATGGATTTAGAAGACGACCCTGCCGATAGAGATATTGTAAAAGCGATTATTGCAATGACTACA
AGCTTAGGGTTCGATACGCTAGTTGAAGGCGTAGAAACCCGAGAGCAATCGCTAATAGTGGGGGCGCTTGGGTGTGGCTA
CGGGCAGGGTTACCTGTACGGTAAGCCCACCTTTGCCGATGATTACGCCGAGCAATATATAGGGTTAAAGTCTGTCGCAA
ACCGCTAA

Upstream 100 bases:

>100_bases
AATAAAGCCAGCATTTGGAATATTCAGTGATAAGTGTCAGCAGACTAATGGCTAGCCAGTCTTCTACTAGTGTCTCCTGT
TGTAAAGGGGAGGTTTTTTA

Downstream 100 bases:

>100_bases
CTTAACCGTTGTTAGTAAAGCGGGTCGTAAAGCTCTGCAGTTAATAATTCCTCGAAATTTTCCGGCACGGGTTCAGATGT
TAAGCCTGTGCGTTCTGCAT

Product: triosephosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>855_residues
MVKAVVGAGLGEQPVDIAVLSQAGDVVFVSKGWLAGLPLFSDQASAVGELKAPKIDWVGNNFFALCREFIGPSVQWVAKS
FGAQENSLTDHIEAMLELVLNGADTQHCFYAIEKNGVLQHYELTAEACSNTALGAVIRHRARSNSIFLAAGIPLDSNFYE
ALFNNLVDGIIYQNLEGYIELANEAAQEILDFKFEGNNPDEPNKQSLLSDYWTFLNEDGQKLSLADNPILRVLTKGAGLQ
NLTLGVVRPDKELVWLKLNVAIINSPDTNIPHGVLISFVNITAETEAHTALEKASERLRLALDGASIGIWDWYISDAEMI
WDDQMYRLYGMEPRQYISVREAWEHVAHPDDNQRVLDELGELLKTKKDTISEFRVLLPDKSIRHLRAYARAVLDEDGLVQ
RVVGMNWDVTKEVEAEERLAHIAFTDELTSLPNRLAFSKKLKNTMKLAEKYHGKVAMLIVDLDHFKDINDSYGHPVGDSL
ICEVVTRLKEVLVGDEYLARIGGDEFALILDNVRSHDAALHYSRRIQKIMAEPIYLMEGPVVNARVSMGVALFPDDGEDA
VALIKAADLAMHQAKKSGRNTVLPYKQEYSSSLEKKIFLEEELRSAIRDEELMLYYQPIIDLSTEKIVGCEALLRWIDRA
GKFVSPVDFIPVAEESGLIYELGNWINATAFKQLKLWQTLHTDMKYISVNVSPHQLQNADFVKDIQRLLDIHNVDPRHIQ
LEITEGTFLQESLNTQSQLRILGEMGFRLAIDDFGTGYSSLAYLKRFAVDVIKIDRSFVMDLEDDPADRDIVKAIIAMTT
SLGFDTLVEGVETREQSLIVGALGCGYGQGYLYGKPTFADDYAEQYIGLKSVANR

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA