Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020208

GI number:

Start: 684294

End: 687176

Strand: Direct

Name: Not Available

Synonym: Sde_0559

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020206

Following gene: 90020209

Centisome position: NA

GC content: NA

Gene sequence:

>2883_bases
ATGCCTAATTTCAAACCTAACCTATTGTCCATGGCCATACTGGCGTTTGGTGCAATATCCCTTCCTACCTATGCTCAAGA
TGCATCCAGTACCGAGGACGCCGAAGACGCACTTGAAGAAGTGGTGGTAACCGGCTTTAGACAAAGCTTGGTTAACGCGT
TAGATAAAAAACGCGCGTCCGATATGGTTACCGAGCAGCTGTCTGCCGATGACCTAGGTAGCTTACCCGATGTATCCATG
GCCGATGCGTTAACGCGCTTGCCAGGCATTTCTGCAGTGCGCACCGGTGGCCAGGCCGCTGAAATTAATATTCGCGGTAT
GTCTGGCGGGTTCGTATTTTCTACTTTGAATGGTCGCGAGCAGGTTTCCACCAGTGGCAGCCGCAGTATTGAATTCGATC
AATACCCATCAGAATTAATTAGCTCTGCAGCTGTGTATAAGTCGCCAAAGGCGTCGCTTATTGAGGGGGGCGTTGCGGGT
TCGGTTGAATTAGAAACTGCTAGCCCATTAGATCTTGATCAGCAGCACACCTTCAACGCTAATGTCCGCTCAATGTATAA
CGATCGCGCCGGTGAAATATCTGATGCAGTTGAGTTTGGTCATCGTTTAAGTCTTGCTTATCAAGGTAAGTTTGCCGGCG
ACACTATAGGTGTTGCTTTGGGTTATGCGCGTTTGTATCAGCCTAGTGTATCAACGCAATTCGTAGGCCTAGCATACAAT
AACTTAGTTGATGTTGATGATGTAGAAGGTGATAACGATGGGCCAGTAAATAACCCCGCAGCAGAGTATGTAAGTGAAGG
TATGGAATTACAGCATCGCGGCGGTGAAGAGACGCGTGATGGTTATATGGCCGCTCTACAATTCGAGCCAAATGAATCGT
TCAGTTTGAAGGCTGACGCTTTTGTATCGAAGTTTGACACCAAGTCATTTGCTCGAGGGTTCCGTGTAAAATTTGATGGT
GCTGCAGCGAGTATTGCCAACGAGCAAATACAAGATAATTTTATGGTTGGTGGCACTATTAATCGCCGATCAAATAGCAA
TACAAGAATAGAAATTGTAAACGACGATAATACTGAGTTTGATGAAGTTCAAAATTTCGGCGTTAATGCAGCTTGGCAAG
TGACAGATGTATTGAATGTTACTCTTGATGTGTCGAAATCCAAAGCCACAAGTGATTTTCAAAATGGATTACTTTGGTCT
CTTGTTGCCGAAGATGCTAATGCAGATACTCCAGTTCTAGATCGTGATATTTCGATTAATTATCAACTTAATGGTTTGAA
TCTACCCGATGTCGGCTTTAGTCAAGCGGATGCATTTTCTGACATTGATAGGGTGATGGTATCTAAGTACGGTATTTATC
CATTTGTTCACACCGATGAAGTTGACGCCGTTAGGCTCGATATCAAATATGATTTCGATATGCCAGTACTTGCTTCTATT
GAGGCAGGTGTTCGACAGTCTAGTCGTGAATACTCGCGCGAGCGCTCGGTATTTGAATACGGTACAGATAACAATTTTAG
TGCTGCCGAACCGCCCTTACGCTTAACGTCAGATATGGTAGACGTTATCGATTGGGAAGGCGATTTCTCTCATTTTCCTA
GTTATTTAGCTATCGATCTAGATGCTGCGCTTAACGCATGGTTTCCTGAAGGCATTCCGCAACCGGTTAAAACTTGGGGC
CCGGGTGGTCCTGGTTTAGTTAACGCTGACTCAAGTGGTGGCGATTCATATTCATGGACAATGTTACAAAGTGGCAGCGT
ATATGAAGACGTATTTGCTGGTTACTTAATGGCAAATATTGACGCAGAGTTATTTGGAATACCTGTGACCGGTAATATCG
GTGTGCGTATGGTAGAAACGGAGCAAAGAGCCACATCTCTAGATGATGTAGGTAGCGAGCCGGAACGCGGTGCGCAATAT
ATAGAAGATGATGTTGGCTATATTAGCAATTTATATGCGCCTTCGATTAAAGGAACGAAATATACCGATTATTTGCCGCA
AATGAACTTGAACTTTTCTTTGACGGAAAACGATCAAATACGAATTGCTTCTGCCAAAGTTATGTCGCGCCCCCCCATTC
AGCGTTTAGCTTCTGACGCGAGCCTGTACATTAGTGATGACGGTGAAATTTCAGGGAACAGTTCTAATAGTCCCTTCTTA
AAACCGTTTTACGCTAATCAATATGATATTTCTTATGAGCACTACTTCGAGAATAGTGATGGGGCAATTGCTGTAGCTCT
GTTCTACAAAGATATTGAGTCGACAGGTATTGTTACAACAATTCTTCCTAATTTTGATTTTGCTAGTGCCGGTTATGGTG
TGCCATCAAAATGGGTTAATCCAAATACTCTAGTTGAGAGTGCTACTACCAACGGTGATTTTGAAGTTGCATATAATGAT
GAAGAAGGTGGTTTCGTTCAAGGCGTCGAGGTGGCTTACACCCAAGTGTTTGATATGTTGCCATCGCCATTTGATGGGCT
GGGAGCAAACCTAAGTTATTCGTATACCGAAAGTGAGATAGAGAAAGAGCGCATTTTAGGCGTTAGTACCGTTAAGCAAA
CGCTAGAAGGCTTATCGAAAAATGTAGCGTCTACAACATTATTTTGGAATTACAAAGATTTTGAAACGCGTGTAAGTGTT
CGATCTAGAGATAAATTTGTTTCTGATCAAGTAGCCGTTGAATCACAAACGGTATTCTTTTCTGGTGAAACCGTTATTGA
TTATCAGGCTTCTTACAATATTACAGATAATCTCGGTGTGATGTTTCAAATCAATAATCTTACTGATGAGCCAACACGCA
GTTACTTTAATACCGAAGATCAAACCGGCACTATCCAGTTTTTTGGTCGGCAATTTTTCGTGGGCGTGACTTACTCAATG
TAG

Upstream 100 bases:

>100_bases
ATTTCTAAAACAATAAATCAAGCCCCTGCTTTAACAATCGCTTGCTCGAAGTAACTCAATGTTAAACGCAGAAGGTAAAC
ACGTTTTCCGGAGAAGGTTT

Downstream 100 bases:

>100_bases
GTCACTTTATTGCAACTCAATAGTTAAAAATAAAAGCAAGCTCATAGAATGTGGAGAAATAACATGAACGCAATAAGAAA
TATGTTAAAGGTGTCGACCC

Product: TonB dependent receptor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>960_residues
MPNFKPNLLSMAILAFGAISLPTYAQDASSTEDAEDALEEVVVTGFRQSLVNALDKKRASDMVTEQLSADDLGSLPDVSM
ADALTRLPGISAVRTGGQAAEINIRGMSGGFVFSTLNGREQVSTSGSRSIEFDQYPSELISSAAVYKSPKASLIEGGVAG
SVELETASPLDLDQQHTFNANVRSMYNDRAGEISDAVEFGHRLSLAYQGKFAGDTIGVALGYARLYQPSVSTQFVGLAYN
NLVDVDDVEGDNDGPVNNPAAEYVSEGMELQHRGGEETRDGYMAALQFEPNESFSLKADAFVSKFDTKSFARGFRVKFDG
AAASIANEQIQDNFMVGGTINRRSNSNTRIEIVNDDNTEFDEVQNFGVNAAWQVTDVLNVTLDVSKSKATSDFQNGLLWS
LVAEDANADTPVLDRDISINYQLNGLNLPDVGFSQADAFSDIDRVMVSKYGIYPFVHTDEVDAVRLDIKYDFDMPVLASI
EAGVRQSSREYSRERSVFEYGTDNNFSAAEPPLRLTSDMVDVIDWEGDFSHFPSYLAIDLDAALNAWFPEGIPQPVKTWG
PGGPGLVNADSSGGDSYSWTMLQSGSVYEDVFAGYLMANIDAELFGIPVTGNIGVRMVETEQRATSLDDVGSEPERGAQY
IEDDVGYISNLYAPSIKGTKYTDYLPQMNLNFSLTENDQIRIASAKVMSRPPIQRLASDASLYISDDGEISGNSSNSPFL
KPFYANQYDISYEHYFENSDGAIAVALFYKDIESTGIVTTILPNFDFASAGYGVPSKWVNPNTLVESATTNGDFEVAYND
EEGGFVQGVEVAYTQVFDMLPSPFDGLGANLSYSYTESEIEKERILGVSTVKQTLEGLSKNVASTTLFWNYKDFETRVSV
RSRDKFVSDQVAVESQTVFFSGETVIDYQASYNITDNLGVMFQINNLTDEPTRSYFNTEDQTGTIQFFGRQFFVGVTYSM

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA