Definition Chlamydophila felis Fe/C-56, complete genome.
Accession NC_007899
Length 1,166,239

Click here to switch to the map view.

The map label for this gene is 89898429

Identifier: 89898429

GI number: 89898429

Start: 727599

End: 728105

Strand: Direct

Name: 89898429

Synonym: CF0622

Alternate gene names: NA

Gene position: 727599-728105 (Clockwise)

Preceding gene: 89898427

Following gene: 89898430

Centisome position: 62.39

GC content: 35.5

Gene sequence:

>507_bases
ATGCCTCATAAAATTTTTTCTTATTTCGCATTTTGTTCAGACGACCTAGCTCTGGCCGATACTTCTAGCGAGCAAATAAA
TCTCCAACGAATGTTTCCAGAAAATATGAGGCTGGAAATGTTTAAAATTCTAGGATCTTTAATATTACTTCTTACTCTAT
TCGGCATTGGAGTTTGGGCATTTAAAAAATTCCTAAAATCTAAAGGTCAAGGTTTTGGTAACTCTTCGACAATCAAGATT
CTTGATAGACGCTCCTTAAACCCCAAAACTTGTATCTACATCATTCGGGTAGTAAATAAAACTCTTGTCATTGCAGAGTC
CGGAGAGAAAATCACCCTGCTTTCAGAATTCCCTCCAGATACAGATATCAATGAACTCCTACAACAAAACGAAAAAAAAG
GACCTTCATCTACTTCTGATTTTCTTAGTAAGAGCATACGGAAATTTTATAAAACTAAGAAGATGGACGACGCACGAGTT
TCTAATCTGACTGACAAAGAATTTTAA

Upstream 100 bases:

>100_bases
ATAAAGAGCCGATCGAAAACAATTCTCTAGTAAAATGTCCCAAAATCAAGTTGTTTCCTATGTTGTTCTATGACTATAGA
AACACAAAAAGGTCTTAAAC

Downstream 100 bases:

>100_bases
GCATCTTTTATGAACAATTTGGAGTGTTTAAATGACAACATGGTCTTTAAATCAAAATAACCTATCAAAATACCTTACGA
ATGCAGGGCTAGAACCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPHKIFSYFAFCSDDLALADTSSEQINLQRMFPENMRLEMFKILGSLILLLTLFGIGVWAFKKFLKSKGQGFGNSSTIKI
LDRRSLNPKTCIYIIRVVNKTLVIAESGEKITLLSEFPPDTDINELLQQNEKKGPSSTSDFLSKSIRKFYKTKKMDDARV
SNLTDKEF

Sequences:

>Translated_168_residues
MPHKIFSYFAFCSDDLALADTSSEQINLQRMFPENMRLEMFKILGSLILLLTLFGIGVWAFKKFLKSKGQGFGNSSTIKI
LDRRSLNPKTCIYIIRVVNKTLVIAESGEKITLLSEFPPDTDINELLQQNEKKGPSSTSDFLSKSIRKFYKTKKMDDARV
SNLTDKEF
>Mature_167_residues
PHKIFSYFAFCSDDLALADTSSEQINLQRMFPENMRLEMFKILGSLILLLTLFGIGVWAFKKFLKSKGQGFGNSSTIKIL
DRRSLNPKTCIYIIRVVNKTLVIAESGEKITLLSEFPPDTDINELLQQNEKKGPSSTSDFLSKSIRKFYKTKKMDDARVS
NLTDKEF

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19174; Mature: 19042

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHKIFSYFAFCSDDLALADTSSEQINLQRMFPENMRLEMFKILGSLILLLTLFGIGVWA
CCHHHHHHHHHHCCCCEEECCCCHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FKKFLKSKGQGFGNSSTIKILDRRSLNPKTCIYIIRVVNKTLVIAESGEKITLLSEFPPD
HHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCC
TDINELLQQNEKKGPSSTSDFLSKSIRKFYKTKKMDDARVSNLTDKEF
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
PHKIFSYFAFCSDDLALADTSSEQINLQRMFPENMRLEMFKILGSLILLLTLFGIGVWA
CHHHHHHHHHHCCCCEEECCCCHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FKKFLKSKGQGFGNSSTIKILDRRSLNPKTCIYIIRVVNKTLVIAESGEKITLLSEFPPD
HHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCC
TDINELLQQNEKKGPSSTSDFLSKSIRKFYKTKKMDDARVSNLTDKEF
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA