| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
Click here to switch to the map view.
The map label for this gene is 89898420
Identifier: 89898420
GI number: 89898420
Start: 716221
End: 716907
Strand: Direct
Name: 89898420
Synonym: CF0613
Alternate gene names: NA
Gene position: 716221-716907 (Clockwise)
Preceding gene: 89898418
Following gene: 89898421
Centisome position: 61.41
GC content: 40.17
Gene sequence:
>687_bases ATGCCCAGGCGCATCGTATTCGTTAATATAAGGACAGCAATTATGCGAAAACTACTTTTATTAGTTTCTTGTGGACTTAT GTCAATCAACCTAACTAGCTGTTCTCTACCAGCATCTGGGAGTTATCATCCTAAACTTTACAAATCTGGAAGCAAGGCCA AAGGCGTTGTGGCTATGTTGCCGGTATTTTACCGTACAGGCAAAGTTTCAGAAGCTCTCCCATGGAATTTACAAGCCGAG TTTACTCAGGAAATTGGAAAGAGATTCCATTCTTCTGAAAAAGTATTCTTAATTAAACATTCTGCATCACCACAAATCAT CTCACAATTTTATTCTCCTGTGGTTCCTGAATTTTCTCCTCAAGCGGTAGCTGAGTTTCTCCCTGCAGAATTTGTCGTGG CCACGGAATTGTTAGAGCAAAAAATATCACAAGATATGTCTGGTCAAGACTCTATCATAGCCTCTGTGCGTGTACGTGTT TTTGATATTCGTCACAATAAGGTTTCCTTAATCTATCAGGAAATCATTGAATCTAGCCAACCTCTAGCTACCACAACTAG CGATTATCATCGTTACGGATGGCAAACCAAAAATTTCGAAGCAACTCCCATGGGTCTGATGCACCAGCGTCTATTTCGAG AAATTGTCGCTAGAGTTGAAGGCTATGTTTGTGCTAATTATTCGTAA
Upstream 100 bases:
>100_bases TATTTTTTTCTTTGTTATAACTTAACTGAAAACAAAAGGTCCGCTCTATTCAAAAGAAAGTAAGGATCCTTGTACAAAAA TTTAGCACGTAAAAAAATAC
Downstream 100 bases:
>100_bases TTTATGATGCATTCCTGGTTGTTCTTTCTTGTGTTTCTAGCTTTAGCAGCTATTTCCTCAAGAAACTTTTTTACTTGGCC AAAACCTTCAGAAAAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MPRRIVFVNIRTAIMRKLLLLVSCGLMSINLTSCSLPASGSYHPKLYKSGSKAKGVVAMLPVFYRTGKVSEALPWNLQAE FTQEIGKRFHSSEKVFLIKHSASPQIISQFYSPVVPEFSPQAVAEFLPAEFVVATELLEQKISQDMSGQDSIIASVRVRV FDIRHNKVSLIYQEIIESSQPLATTTSDYHRYGWQTKNFEATPMGLMHQRLFREIVARVEGYVCANYS
Sequences:
>Translated_228_residues MPRRIVFVNIRTAIMRKLLLLVSCGLMSINLTSCSLPASGSYHPKLYKSGSKAKGVVAMLPVFYRTGKVSEALPWNLQAE FTQEIGKRFHSSEKVFLIKHSASPQIISQFYSPVVPEFSPQAVAEFLPAEFVVATELLEQKISQDMSGQDSIIASVRVRV FDIRHNKVSLIYQEIIESSQPLATTTSDYHRYGWQTKNFEATPMGLMHQRLFREIVARVEGYVCANYS >Mature_227_residues PRRIVFVNIRTAIMRKLLLLVSCGLMSINLTSCSLPASGSYHPKLYKSGSKAKGVVAMLPVFYRTGKVSEALPWNLQAEF TQEIGKRFHSSEKVFLIKHSASPQIISQFYSPVVPEFSPQAVAEFLPAEFVVATELLEQKISQDMSGQDSIIASVRVRVF DIRHNKVSLIYQEIIESSQPLATTTSDYHRYGWQTKNFEATPMGLMHQRLFREIVARVEGYVCANYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25739; Mature: 25608
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRIVFVNIRTAIMRKLLLLVSCGLMSINLTSCSLPASGSYHPKLYKSGSKAKGVVAML CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHH PVFYRTGKVSEALPWNLQAEFTQEIGKRFHSSEKVFLIKHSASPQIISQFYSPVVPEFSP HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCH QAVAEFLPAEFVVATELLEQKISQDMSGQDSIIASVRVRVFDIRHNKVSLIYQEIIESSQ HHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCHHHHHHHHHHCCCC PLATTTSDYHRYGWQTKNFEATPMGLMHQRLFREIVARVEGYVCANYS CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure PRRIVFVNIRTAIMRKLLLLVSCGLMSINLTSCSLPASGSYHPKLYKSGSKAKGVVAML CCEEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHH PVFYRTGKVSEALPWNLQAEFTQEIGKRFHSSEKVFLIKHSASPQIISQFYSPVVPEFSP HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCH QAVAEFLPAEFVVATELLEQKISQDMSGQDSIIASVRVRVFDIRHNKVSLIYQEIIESSQ HHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCHHHHHHHHHHCCCC PLATTTSDYHRYGWQTKNFEATPMGLMHQRLFREIVARVEGYVCANYS CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA