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The map label for this gene is sdt [H]

Identifier: 89898322

GI number: 89898322

Start: 605536

End: 607017

Strand: Direct

Name: sdt [H]

Synonym: CF0515

Alternate gene names: 89898322

Gene position: 605536-607017 (Clockwise)

Preceding gene: 89898321

Following gene: 89898323

Centisome position: 51.92

GC content: 38.53

Gene sequence:

>1482_bases
ATGAACAAACATCAAAACCAATTCTCTTCTAGACTCGGATTTATTTTTTCTATGATGGGCATCGCTGTCGGTGCTGGTAA
TATTTGGCGCTTCCCTAGAATTGCAGCACAAAACGGCTCCGGAGCATTTATTTTAATTTGGCTTTTGTTTTTGTTTATCT
GGTCAATTCCCCTGATTATTATAGAACTTTCTCTAGGAAAATTAACGAGAAAAGCCCCTATAGGCACGTTAATTAAGCTT
GCCGGATCAAAATACGCCTGGTTAGGAGGATTTGTCACTCTAGTAACAACTTGTATTCTAGCCTACTACTCTAATATTGT
AGGATGGGGGTTAAGCTATTTTTACTACTCAATTTCAGGGAAAATCTACGCAGGAAATAATTTTTCTCAATTATGGGAAA
CCCACTATCAGAGCTCCTTCCCCCTATTGTTTCATTTTCTATCCCTATTTCTAGCCTACATGATCATTCGCAAAGGTATC
GTGCAGGGAATTGAAAAATGTAATAAAATTCTTATCCCCTCATTCTTTGTTTGCACCCTAATACTACTCCTTAGAGCTAT
TACCTTGCCTAATGCTATGCAGGGGATCAAGCAACTCTTCTCCTTTGATCTAGCATCTTTGTCTAATTACAAATTATGGC
TGGAAGCTCTGACTCAGAATGCTTGGGATACAGGAGCCGGTTGGGGATTGCTTTTGGTATATTCAGGTTTTGCCTCAAAG
AAAACAGGGGTTGTGAGCAACGGGGCCCTCACCGCAATATCGAACAACATTGTTTCCCTAATTATGGGAATCATTGTATT
TTCCACCTGTGCTTCCCTGGATGTCTTAGGGACAACACAATTACAGCAAGGTGCAGGATCATCGAGCATTGGTATAGCCT
TCATTTACTTGCCAGAGTTATTTACAAGAGTGCCTGGGCCAGACTATTTAGCAGCCGTCTTCAGTTCTATATTTTTCTTA
GCCTTTGCAACAGCAGCTCTTTCATCGATGATTTCAATGCTATTTCTATTGACTCAAACACTTTCCGAATTTGGAATAAA
AAAATGTACAGCAGAGCTATCAGCCACAATTATTGCCTTTATCCTTGGAGTGCCTTCATCTTTAAGTCTTGCGGTGTTTG
CTAACCAAGACACAGTTTGGGGAATAGGACTAATTATTAACGGTCTTATTTTTATTTATGCCGCAATGCACTACGGACTT
TCTCATTTAAAAAAGAAAATCATTAACTCTGTTCCGGGTGATATTCGCCTCAACAAATCTTTTGATCTCATGGTAAAATA
CCTACTTCCTGTTGAAGGAATCGTTTTATTGTGTTGGTATTTTTATGAAGGTCTTTTTCCAGAAGACGGTCACTGGTGGA
ATCCCATATCCGTTTACAGTCTCTCTAGTCTAATTTTACAGTGGTCTACGGGATTAATTATTTTATGGTGTTTTAATAAA
AAACTTTCTAAATGCTTTTCTTTGCACAACTTAGAAAACTAA

Upstream 100 bases:

>100_bases
ATATGATTGAAACAGCTTTAAACGTCTGGTCTGATTGCTGTGTTGTTAGTGTAACCGACAAATATTTTTCAAATAAATTT
ATTGAATTAGAACAAGTATA

Downstream 100 bases:

>100_bases
AATCTTATATCTTGATATATTTCCCTAATCTAAGATATTCTGTCCTAAGTTTTATTGTTTTTCCCAGACAACTTAAGGAA
TCGCATGTCAACACCACTAT

Product: sodium-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNKHQNQFSSRLGFIFSMMGIAVGAGNIWRFPRIAAQNGSGAFILIWLLFLFIWSIPLIIIELSLGKLTRKAPIGTLIKL
AGSKYAWLGGFVTLVTTCILAYYSNIVGWGLSYFYYSISGKIYAGNNFSQLWETHYQSSFPLLFHFLSLFLAYMIIRKGI
VQGIEKCNKILIPSFFVCTLILLLRAITLPNAMQGIKQLFSFDLASLSNYKLWLEALTQNAWDTGAGWGLLLVYSGFASK
KTGVVSNGALTAISNNIVSLIMGIIVFSTCASLDVLGTTQLQQGAGSSSIGIAFIYLPELFTRVPGPDYLAAVFSSIFFL
AFATAALSSMISMLFLLTQTLSEFGIKKCTAELSATIIAFILGVPSSLSLAVFANQDTVWGIGLIINGLIFIYAAMHYGL
SHLKKKIINSVPGDIRLNKSFDLMVKYLLPVEGIVLLCWYFYEGLFPEDGHWWNPISVYSLSSLILQWSTGLIILWCFNK
KLSKCFSLHNLEN

Sequences:

>Translated_493_residues
MNKHQNQFSSRLGFIFSMMGIAVGAGNIWRFPRIAAQNGSGAFILIWLLFLFIWSIPLIIIELSLGKLTRKAPIGTLIKL
AGSKYAWLGGFVTLVTTCILAYYSNIVGWGLSYFYYSISGKIYAGNNFSQLWETHYQSSFPLLFHFLSLFLAYMIIRKGI
VQGIEKCNKILIPSFFVCTLILLLRAITLPNAMQGIKQLFSFDLASLSNYKLWLEALTQNAWDTGAGWGLLLVYSGFASK
KTGVVSNGALTAISNNIVSLIMGIIVFSTCASLDVLGTTQLQQGAGSSSIGIAFIYLPELFTRVPGPDYLAAVFSSIFFL
AFATAALSSMISMLFLLTQTLSEFGIKKCTAELSATIIAFILGVPSSLSLAVFANQDTVWGIGLIINGLIFIYAAMHYGL
SHLKKKIINSVPGDIRLNKSFDLMVKYLLPVEGIVLLCWYFYEGLFPEDGHWWNPISVYSLSSLILQWSTGLIILWCFNK
KLSKCFSLHNLEN
>Mature_493_residues
MNKHQNQFSSRLGFIFSMMGIAVGAGNIWRFPRIAAQNGSGAFILIWLLFLFIWSIPLIIIELSLGKLTRKAPIGTLIKL
AGSKYAWLGGFVTLVTTCILAYYSNIVGWGLSYFYYSISGKIYAGNNFSQLWETHYQSSFPLLFHFLSLFLAYMIIRKGI
VQGIEKCNKILIPSFFVCTLILLLRAITLPNAMQGIKQLFSFDLASLSNYKLWLEALTQNAWDTGAGWGLLLVYSGFASK
KTGVVSNGALTAISNNIVSLIMGIIVFSTCASLDVLGTTQLQQGAGSSSIGIAFIYLPELFTRVPGPDYLAAVFSSIFFL
AFATAALSSMISMLFLLTQTLSEFGIKKCTAELSATIIAFILGVPSSLSLAVFANQDTVWGIGLIINGLIFIYAAMHYGL
SHLKKKIINSVPGDIRLNKSFDLMVKYLLPVEGIVLLCWYFYEGLFPEDGHWWNPISVYSLSSLILQWSTGLIILWCFNK
KLSKCFSLHNLEN

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI134304856, Length=355, Percent_Identity=27.3239436619718, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI289191351, Length=399, Percent_Identity=24.5614035087719, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI4557046, Length=399, Percent_Identity=24.5614035087719, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI289191377, Length=420, Percent_Identity=25, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI4507041, Length=402, Percent_Identity=24.6268656716418, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI4507043, Length=385, Percent_Identity=24.4155844155844, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI33354281, Length=306, Percent_Identity=26.1437908496732, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI188528618, Length=355, Percent_Identity=25.0704225352113, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI58219014, Length=297, Percent_Identity=25.5892255892256, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI171184408, Length=395, Percent_Identity=24.8101265822785, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI171184406, Length=395, Percent_Identity=24.8101265822785, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI171184404, Length=395, Percent_Identity=24.8101265822785, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI11181770, Length=298, Percent_Identity=25.503355704698, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI21361581, Length=413, Percent_Identity=22.5181598062954, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI194018524, Length=311, Percent_Identity=25.4019292604502, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI7657587, Length=412, Percent_Identity=22.8155339805825, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI197276623, Length=355, Percent_Identity=24.5070422535211, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI54607094, Length=355, Percent_Identity=24.5070422535211, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI67782317, Length=430, Percent_Identity=22.5581395348837, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI67782313, Length=430, Percent_Identity=22.5581395348837, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI67782315, Length=430, Percent_Identity=22.5581395348837, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI51468073, Length=407, Percent_Identity=22.6044226044226, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI92859670, Length=119, Percent_Identity=37.8151260504202, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI21361693, Length=122, Percent_Identity=36.8852459016393, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI12408638, Length=275, Percent_Identity=24, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI6005715, Length=144, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI289191353, Length=234, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25146584, Length=511, Percent_Identity=22.7005870841487, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71995588, Length=370, Percent_Identity=23.5135135135135, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17569475, Length=448, Percent_Identity=23.2142857142857, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17554804, Length=342, Percent_Identity=25.1461988304094, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71998244, Length=295, Percent_Identity=23.728813559322, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17555248, Length=118, Percent_Identity=34.7457627118644, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI133952791, Length=131, Percent_Identity=31.2977099236641, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24762620, Length=469, Percent_Identity=25.1599147121535, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI17136952, Length=382, Percent_Identity=24.3455497382199, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281364394, Length=382, Percent_Identity=24.3455497382199, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28574704, Length=382, Percent_Identity=24.3455497382199, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI17136950, Length=382, Percent_Identity=24.3455497382199, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28574702, Length=382, Percent_Identity=24.3455497382199, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24639514, Length=384, Percent_Identity=25.78125, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI221329674, Length=384, Percent_Identity=25.78125, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24639516, Length=295, Percent_Identity=27.4576271186441, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281363702, Length=383, Percent_Identity=26.6318537859008, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24582567, Length=357, Percent_Identity=25.4901960784314, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281364136, Length=408, Percent_Identity=24.5098039215686, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24655079, Length=300, Percent_Identity=25.3333333333333, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24661428, Length=415, Percent_Identity=23.3734939759036, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281363700, Length=338, Percent_Identity=27.5147928994083, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24652942, Length=406, Percent_Identity=24.6305418719212, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI45551088, Length=406, Percent_Identity=24.6305418719212, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281365034, Length=406, Percent_Identity=23.8916256157635, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI19921936, Length=413, Percent_Identity=22.2760290556901, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI19921352, Length=411, Percent_Identity=22.8710462287105, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24584353, Length=411, Percent_Identity=22.8710462287105, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24639853, Length=423, Percent_Identity=21.0401891252955, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45551183, Length=119, Percent_Identity=33.6134453781513, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45550877, Length=120, Percent_Identity=35, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24654186, Length=160, Percent_Identity=28.75, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24582569, Length=327, Percent_Identity=23.8532110091743, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 54567; Mature: 54567

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKHQNQFSSRLGFIFSMMGIAVGAGNIWRFPRIAAQNGSGAFILIWLLFLFIWSIPLII
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IELSLGKLTRKAPIGTLIKLAGSKYAWLGGFVTLVTTCILAYYSNIVGWGLSYFYYSISG
HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
KIYAGNNFSQLWETHYQSSFPLLFHFLSLFLAYMIIRKGIVQGIEKCNKILIPSFFVCTL
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILLLRAITLPNAMQGIKQLFSFDLASLSNYKLWLEALTQNAWDTGAGWGLLLVYSGFASK
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHEECCCCC
KTGVVSNGALTAISNNIVSLIMGIIVFSTCASLDVLGTTQLQQGAGSSSIGIAFIYLPEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCEEEEEHHHH
FTRVPGPDYLAAVFSSIFFLAFATAALSSMISMLFLLTQTLSEFGIKKCTAELSATIIAF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGVPSSLSLAVFANQDTVWGIGLIINGLIFIYAAMHYGLSHLKKKIINSVPGDIRLNKS
HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCH
FDLMVKYLLPVEGIVLLCWYFYEGLFPEDGHWWNPISVYSLSSLILQWSTGLIILWCFNK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCH
KLSKCFSLHNLEN
HHHHHHHHHCCCC
>Mature Secondary Structure
MNKHQNQFSSRLGFIFSMMGIAVGAGNIWRFPRIAAQNGSGAFILIWLLFLFIWSIPLII
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IELSLGKLTRKAPIGTLIKLAGSKYAWLGGFVTLVTTCILAYYSNIVGWGLSYFYYSISG
HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
KIYAGNNFSQLWETHYQSSFPLLFHFLSLFLAYMIIRKGIVQGIEKCNKILIPSFFVCTL
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILLLRAITLPNAMQGIKQLFSFDLASLSNYKLWLEALTQNAWDTGAGWGLLLVYSGFASK
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHEECCCCC
KTGVVSNGALTAISNNIVSLIMGIIVFSTCASLDVLGTTQLQQGAGSSSIGIAFIYLPEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCEEEEEHHHH
FTRVPGPDYLAAVFSSIFFLAFATAALSSMISMLFLLTQTLSEFGIKKCTAELSATIIAF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGVPSSLSLAVFANQDTVWGIGLIINGLIFIYAAMHYGLSHLKKKIINSVPGDIRLNKS
HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCH
FDLMVKYLLPVEGIVLLCWYFYEGLFPEDGHWWNPISVYSLSSLILQWSTGLIILWCFNK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCH
KLSKCFSLHNLEN
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]