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The map label for this gene is zip

Identifier: 89898301

GI number: 89898301

Start: 580136

End: 581221

Strand: Direct

Name: zip

Synonym: CF0494

Alternate gene names: NA

Gene position: 580136-581221 (Clockwise)

Preceding gene: 89898300

Following gene: 89898304

Centisome position: 49.74

GC content: 40.88

Gene sequence:

>1086_bases
ATGAGTACTTCTATATCGCGTTCCTCTTCACACGAAGAGGCAATAGAAAAGGTTTCCATGTTAAAAAGGGAGTGTCAAAA
CTCTCGTCTTAGTCGCAAGATTGTTAGCTTGACTCTTGTGGCTACGGGTATCATACTTCTAATATCTGGAATTCTTCTTT
TAACGCTTACAATTACGAGTTTACCAGCAGCATTCTCTATTGCTTTAGGGGCAACAGTTATTGCTATAGGGACAAGTTTG
ATCTCTTTTGGCGTGGCTATGCGTCTTCTTAAAAGGCCTCCAACTGGTGAGGGGGAAGAAGTTCTGGCCGGTGAAATCAT
AAAGGTTAGAGAAATAGCCCAGAAGAAAACAGAAGAGTCTCAGCAGCAACAGTTAAAATTAACAGAATCGCAAAGACAAC
TTAGCGAAATAGCCTCTCAACTTGATACTGAAAGACAAACCATTGCTAGCTTGCGCGCACGTCTAAGCGAAGTGGAGGAA
GCACAAGAAAAAATTCAGGAAGAAAATATAGATTTTCGGACTCGTATTCATGATGCTGAGACTAGTGTTAATCAAAAAGA
TTTGCGAATTCGATGTCTAGAGACTGAATTGGGTACCGAGAAAGGAAAAGTCGAGACTCTTAAGAATAAAGTTCAAAATT
TGCAGACGGGGGCACAGGATCTACAAGCTTTAAAAAGTGATCTTGATCGAGTTCTTACACGTGAGGCAGAGGTCTTACAA
CGCGTAACCGAAGAGCATAATAGAGAACGTGAACAGTTATTTTTACAATTAGAGGCGGTGACACAAGAGAGGAATAAAGC
TTTGGAAAAAATTGCTACGATGAACGAGGGTTCCTCTTCTGGACTTAGGAGACGAAGCTCTTCCACGCAATCATTAATTT
CTTCTAGTGGTGCAAGATCCTCTAGAGGGACTTTCTCTTCTTGGGTGAAAGGTTTTCAAAAACATAAAAGAAGCTCTTCG
TCAGAAACAATATTTAGTCCTGTGTTGGGTAGCGATTTCTCTTCGGAAGAAAGAGCACGACTTGATTCACAAACCACATC
AGATATTGAAGAGGCTGAGGAAACTGCTGAAGAAGCTAGTGAATAA

Upstream 100 bases:

>100_bases
TTATATGCATAAAACATGTTTTTAATTTTTTTTCTAAGAAAATAACAACAAACTTGTTATAATTTTACAGATTTTTATTG
TTTTTCAAAATAGCAGGGGT

Downstream 100 bases:

>100_bases
TAGAATTATAAATTTTTTACACATCTAAACGTGTTTTTCTTTTTTCTTTTTGAAGGAGGATAGTCTGATTTAGAAATTGC
AGAGCAGATTGCCAAAGCAC

Product: synaptonemal complex protein

Products: NA

Alternate protein names: Inner Membrane Protein

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSTSISRSSSHEEAIEKVSMLKRECQNSRLSRKIVSLTLVATGIILLISGILLLTLTITSLPAAFSIALGATVIAIGTSL
ISFGVAMRLLKRPPTGEGEEVLAGEIIKVREIAQKKTEESQQQQLKLTESQRQLSEIASQLDTERQTIASLRARLSEVEE
AQEKIQEENIDFRTRIHDAETSVNQKDLRIRCLETELGTEKGKVETLKNKVQNLQTGAQDLQALKSDLDRVLTREAEVLQ
RVTEEHNREREQLFLQLEAVTQERNKALEKIATMNEGSSSGLRRRSSSTQSLISSSGARSSRGTFSSWVKGFQKHKRSSS
SETIFSPVLGSDFSSEERARLDSQTTSDIEEAEETAEEASE

Sequences:

>Translated_361_residues
MSTSISRSSSHEEAIEKVSMLKRECQNSRLSRKIVSLTLVATGIILLISGILLLTLTITSLPAAFSIALGATVIAIGTSL
ISFGVAMRLLKRPPTGEGEEVLAGEIIKVREIAQKKTEESQQQQLKLTESQRQLSEIASQLDTERQTIASLRARLSEVEE
AQEKIQEENIDFRTRIHDAETSVNQKDLRIRCLETELGTEKGKVETLKNKVQNLQTGAQDLQALKSDLDRVLTREAEVLQ
RVTEEHNREREQLFLQLEAVTQERNKALEKIATMNEGSSSGLRRRSSSTQSLISSSGARSSRGTFSSWVKGFQKHKRSSS
SETIFSPVLGSDFSSEERARLDSQTTSDIEEAEETAEEASE
>Mature_360_residues
STSISRSSSHEEAIEKVSMLKRECQNSRLSRKIVSLTLVATGIILLISGILLLTLTITSLPAAFSIALGATVIAIGTSLI
SFGVAMRLLKRPPTGEGEEVLAGEIIKVREIAQKKTEESQQQQLKLTESQRQLSEIASQLDTERQTIASLRARLSEVEEA
QEKIQEENIDFRTRIHDAETSVNQKDLRIRCLETELGTEKGKVETLKNKVQNLQTGAQDLQALKSDLDRVLTREAEVLQR
VTEEHNREREQLFLQLEAVTQERNKALEKIATMNEGSSSGLRRRSSSTQSLISSSGARSSRGTFSSWVKGFQKHKRSSSS
ETIFSPVLGSDFSSEERARLDSQTTSDIEEAEETAEEASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40063; Mature: 39931

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSISRSSSHEEAIEKVSMLKRECQNSRLSRKIVSLTLVATGIILLISGILLLTLTITS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAAFSIALGATVIAIGTSLISFGVAMRLLKRPPTGEGEEVLAGEIIKVREIAQKKTEES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQQQLKLTESQRQLSEIASQLDTERQTIASLRARLSEVEEAQEKIQEENIDFRTRIHDAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TSVNQKDLRIRCLETELGTEKGKVETLKNKVQNLQTGAQDLQALKSDLDRVLTREAEVLQ
HCCCCHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVTEEHNREREQLFLQLEAVTQERNKALEKIATMNEGSSSGLRRRSSSTQSLISSSGARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
SRGTFSSWVKGFQKHKRSSSSETIFSPVLGSDFSSEERARLDSQTTSDIEEAEETAEEAS
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
STSISRSSSHEEAIEKVSMLKRECQNSRLSRKIVSLTLVATGIILLISGILLLTLTITS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAAFSIALGATVIAIGTSLISFGVAMRLLKRPPTGEGEEVLAGEIIKVREIAQKKTEES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQQQLKLTESQRQLSEIASQLDTERQTIASLRARLSEVEEAQEKIQEENIDFRTRIHDAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TSVNQKDLRIRCLETELGTEKGKVETLKNKVQNLQTGAQDLQALKSDLDRVLTREAEVLQ
HCCCCHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVTEEHNREREQLFLQLEAVTQERNKALEKIATMNEGSSSGLRRRSSSTQSLISSSGARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
SRGTFSSWVKGFQKHKRSSSSETIFSPVLGSDFSSEERARLDSQTTSDIEEAEETAEEAS
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA