| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is 89898269
Identifier: 89898269
GI number: 89898269
Start: 549558
End: 550922
Strand: Direct
Name: 89898269
Synonym: CF0462
Alternate gene names: NA
Gene position: 549558-550922 (Clockwise)
Preceding gene: 89898268
Following gene: 89898273
Centisome position: 47.12
GC content: 39.12
Gene sequence:
>1365_bases ATGAGAAAGCGACATTCTTTCTTTCACCCCACACCCAGTAAACCCGAACCCTTGGTTTCTATGATTCAAAAAACCATAAC TATGGTGGAAAGGATCCAAGGTAGAACTGGGGATCCAGTGAATTTAGAACTAAATAAGATTTGCGCAGATATTCAAGAAA TCAAGATGATTTTAGTGAAACAGGCTAAGGATATAGATTGTTTATATACAAAAAATACCGATGAGCAAATTCAGAATTTA GAAACGGATATGAGTTTTGTGAAGACATCCCTGCACAACCTTTTAGAAGAATTGAAAGGATTAAAGATTGTGGTAGAGGA AGGAATTGATAACTCACTAAATGATCATAGTCACTTGGTTAGGTCTGTTTTAGTAGAGATCTATCAGAAGTTCCTATCTA CATCTGGAGGAACGATCTCAGGAAATATCGATATGAATAATCATGCGGTTTTGGGGCTTGAAATGCCCCAAAATCCTACA GATTCCTATGCAGCATCTGTGGGGTATGTAGAATCTCAACTACGCCCTATTGAGGCTAAACTTGTTGAAATATGTGAAAA AGTGAAAAGCCACGATAGTGTCATAACTTCTATGAATTTTCAAATGATGCCGGTTTCTGGAGGGAAATTTCGTGGAATCG TAGATATGGATGGTCATAGACTCACTGGGATTGCATATCCTAGAGAACGTTCTGACGCGATATCTCTAGATTATCTTCAT AGTTATCTAGAATCGAAAAATCTTTCTGAAGGTTCTGTAACAGAATCTGTATTACAGTGTCCAACTGCTAATGTGGAAGC ATGCAGCCTCTATTCCATAGGAGTAAGTCACAAGGTAGATTGTCCTCTTCCTATAGCACTTCTTTCTCAAGGAATGATAG GATTTACCTGGAGAGCAAAAAGTCCAACCTCCTCTGGGAAATTCCCTATGAATGCTCTTAAATACGCATTGTCTGATCAA GATCAACGGTGTTTTGTACTTAATAACAACATTTTATACGGGAAATATGCAGGAAGCTACACTTGGGATCTTACATTGAA AGCTTTAATCCCCTCAATTTTAGAACAGAAAAGCCCGAAGATAAGGATGAGAGTATATTACGATCAATCTTTTTGGAATC ATAAGGAAGAGCTTCGAGGTAATGCCGGCTATATAGAAATGCCTCTAATTTCTGTGGGACGAACAAGTCTAGGCGGCCAT AGCTACGATATTGTAGAATTACCTGCAGGAAATGCGCGAGTATTGGTCGTTCCTGAAAATTGCGGCGGAGTGACTATACA TTTGGAAAATGACCAAGAGGGACTCCCCCCTCAAGATCTTTATATTGTGCAAGCTGCTTACTCGTGTAGCTGGCGACGTT ATTAA
Upstream 100 bases:
>100_bases CTAATTTTTTAACTATTTTTAATAATTAATTATATTTTTTTAATTTAAATTGTTTTGTTATACGCAAATTTATGATTGAT TATTTGCATAGGATAAAACT
Downstream 100 bases:
>100_bases GACAGGCCACAGCTGTATTCTTACAGCTGTGTGTTCTAACTATTGTTTTACAGAGTTTAAATAGAGACTTAGAGGATGAT TGTCATCCAAATCTCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRKRHSFFHPTPSKPEPLVSMIQKTITMVERIQGRTGDPVNLELNKICADIQEIKMILVKQAKDIDCLYTKNTDEQIQNL ETDMSFVKTSLHNLLEELKGLKIVVEEGIDNSLNDHSHLVRSVLVEIYQKFLSTSGGTISGNIDMNNHAVLGLEMPQNPT DSYAASVGYVESQLRPIEAKLVEICEKVKSHDSVITSMNFQMMPVSGGKFRGIVDMDGHRLTGIAYPRERSDAISLDYLH SYLESKNLSEGSVTESVLQCPTANVEACSLYSIGVSHKVDCPLPIALLSQGMIGFTWRAKSPTSSGKFPMNALKYALSDQ DQRCFVLNNNILYGKYAGSYTWDLTLKALIPSILEQKSPKIRMRVYYDQSFWNHKEELRGNAGYIEMPLISVGRTSLGGH SYDIVELPAGNARVLVVPENCGGVTIHLENDQEGLPPQDLYIVQAAYSCSWRRY
Sequences:
>Translated_454_residues MRKRHSFFHPTPSKPEPLVSMIQKTITMVERIQGRTGDPVNLELNKICADIQEIKMILVKQAKDIDCLYTKNTDEQIQNL ETDMSFVKTSLHNLLEELKGLKIVVEEGIDNSLNDHSHLVRSVLVEIYQKFLSTSGGTISGNIDMNNHAVLGLEMPQNPT DSYAASVGYVESQLRPIEAKLVEICEKVKSHDSVITSMNFQMMPVSGGKFRGIVDMDGHRLTGIAYPRERSDAISLDYLH SYLESKNLSEGSVTESVLQCPTANVEACSLYSIGVSHKVDCPLPIALLSQGMIGFTWRAKSPTSSGKFPMNALKYALSDQ DQRCFVLNNNILYGKYAGSYTWDLTLKALIPSILEQKSPKIRMRVYYDQSFWNHKEELRGNAGYIEMPLISVGRTSLGGH SYDIVELPAGNARVLVVPENCGGVTIHLENDQEGLPPQDLYIVQAAYSCSWRRY >Mature_454_residues MRKRHSFFHPTPSKPEPLVSMIQKTITMVERIQGRTGDPVNLELNKICADIQEIKMILVKQAKDIDCLYTKNTDEQIQNL ETDMSFVKTSLHNLLEELKGLKIVVEEGIDNSLNDHSHLVRSVLVEIYQKFLSTSGGTISGNIDMNNHAVLGLEMPQNPT DSYAASVGYVESQLRPIEAKLVEICEKVKSHDSVITSMNFQMMPVSGGKFRGIVDMDGHRLTGIAYPRERSDAISLDYLH SYLESKNLSEGSVTESVLQCPTANVEACSLYSIGVSHKVDCPLPIALLSQGMIGFTWRAKSPTSSGKFPMNALKYALSDQ DQRCFVLNNNILYGKYAGSYTWDLTLKALIPSILEQKSPKIRMRVYYDQSFWNHKEELRGNAGYIEMPLISVGRTSLGGH SYDIVELPAGNARVLVVPENCGGVTIHLENDQEGLPPQDLYIVQAAYSCSWRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50772; Mature: 50772
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRHSFFHPTPSKPEPLVSMIQKTITMVERIQGRTGDPVNLELNKICADIQEIKMILVK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHH QAKDIDCLYTKNTDEQIQNLETDMSFVKTSLHNLLEELKGLKIVVEEGIDNSLNDHSHLV CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH RSVLVEIYQKFLSTSGGTISGNIDMNNHAVLGLEMPQNPTDSYAASVGYVESQLRPIEAK HHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHH LVEICEKVKSHDSVITSMNFQMMPVSGGKFRGIVDMDGHRLTGIAYPRERSDAISLDYLH HHHHHHHHHHCCCEEEECCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCEEHHHHH SYLESKNLSEGSVTESVLQCPTANVEACSLYSIGVSHKVDCPLPIALLSQGMIGFTWRAK HHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECC SPTSSGKFPMNALKYALSDQDQRCFVLNNNILYGKYAGSYTWDLTLKALIPSILEQKSPK CCCCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEECCCCEEEEEEHHHHHHHHHHCCCCC IRMRVYYDQSFWNHKEELRGNAGYIEMPLISVGRTSLGGHSYDIVELPAGNARVLVVPEN EEEEEEECCHHHCCHHHHCCCCCEEEECEEECCCCCCCCCCEEEEEECCCCEEEEEEECC CGGVTIHLENDQEGLPPQDLYIVQAAYSCSWRRY CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MRKRHSFFHPTPSKPEPLVSMIQKTITMVERIQGRTGDPVNLELNKICADIQEIKMILVK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHH QAKDIDCLYTKNTDEQIQNLETDMSFVKTSLHNLLEELKGLKIVVEEGIDNSLNDHSHLV CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH RSVLVEIYQKFLSTSGGTISGNIDMNNHAVLGLEMPQNPTDSYAASVGYVESQLRPIEAK HHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHH LVEICEKVKSHDSVITSMNFQMMPVSGGKFRGIVDMDGHRLTGIAYPRERSDAISLDYLH HHHHHHHHHHCCCEEEECCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCEEHHHHH SYLESKNLSEGSVTESVLQCPTANVEACSLYSIGVSHKVDCPLPIALLSQGMIGFTWRAK HHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECC SPTSSGKFPMNALKYALSDQDQRCFVLNNNILYGKYAGSYTWDLTLKALIPSILEQKSPK CCCCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEECCCCEEEEEEHHHHHHHHHHCCCCC IRMRVYYDQSFWNHKEELRGNAGYIEMPLISVGRTSLGGHSYDIVELPAGNARVLVVPEN EEEEEEECCHHHCCHHHHCCCCCEEEECEEECCCCCCCCCCEEEEEECCCCEEEEEEECC CGGVTIHLENDQEGLPPQDLYIVQAAYSCSWRRY CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]