| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is leuS [H]
Identifier: 89898198
GI number: 89898198
Start: 462567
End: 465029
Strand: Direct
Name: leuS [H]
Synonym: CF0391
Alternate gene names: 89898198
Gene position: 462567-465029 (Clockwise)
Preceding gene: 89898195
Following gene: 89898199
Centisome position: 39.66
GC content: 42.02
Gene sequence:
>2463_bases ATGCGGTACGATCCTAGTTTGATAGAAAAGAAGTGGCAAGAATTTTGGAAGGAACACAAGAGCTTCAAGGCGAACGAAGC TGATGATAAACCTAAATATTATGTATTAGACATGTTCCCTTATCCATCGGGAGCAGGACTGCACGTCGGACATTTAATCG GTTATACCGCCACGGATATTGTCGCTCGCTATAAGCGAGCTAAAGGATTTTCTGTTTTACATCCTATGGGGTGGGACAGT TTCGGATTGCCTGCGGAACAATATGCTGTCAGAACGGGAACACATCCTAGAGAAACAACTCAAAAGAATATAGAAAATTT TAGAAAGCAACTTTCTGCTATGGGATTTTCTTATGATGAGGGTAGAGAGTTCGCTACGAGTGATCCCGAATATTATCGTT GGACGCAGAAACTTTTTCTTTTACTTTACGAAAAAGGCCTAGCTTATATGGCAGATATGGCGGTCAACTATTGCCCAGAG TTGGGGACTGTCTTATCCAACGAAGAGGTGGAAAATGGCTTATCTATAGAGGGAGGGTATCCTGTAGAGCGCCGAATGTT GCGTCAATGGATTTTACGGATCACAGCTTATTCTGATCAGCTTTTAGAAGGTCTAGAGGGCTTAGACTGGCCAGAAAATG TTAAGCAGCTTCAAAGAAATTGGATAGGGAAGTCTGAAGGGGCTCTCGTACGCTTTAAAGTGAATAATCAAAACTTTTTG GAGGTATTCACAACACGTCCTGATACTTTATGTGGTGTATCATTTTTGGTCATTGCTCCAGAGCACCCTGAGGTTGGTCA ATTAATTGCTGAGGATCGGAGAGAAGAAGTAGAGGCTTATATTTGCCGCGCTCAAAGTAAAAGTGAAAGAGATCGTATAA GCGAGAGCAAAATAAAAAGCGGAGTATTTACAGGAACCTATGCTAAGCATCCTATCACGGGAGCAGATATTCCTATTTGG GTTTCCGACTACGTTATCCTTGGTTATGGCTCTGGAGTGGTTATGGGCGTTCCTGCTCACGATGAAAGAGACAGGGAGTT TGCCGAAACTTTTTCTCTGCCTATTTATGAAGTTCTTGATACAGATGGATATTGCATTCATAGTAATCACGGAGACTTTC TTTTAGACGGTCTTTGGGGGCGGGAAGCTCAGGATTATGTCATTGCTTATCTGCAGAAAAAGAATCTAGGGGAGTCTAAG GTTGCGTATAAACTGCGCGATTGGCTGTTTTCTCGTCAAAGATATTGGGGAGAGCCGATTCCTATTATTCATTTTGAAGA CGGTACGTGTCGTCCTTTGGAAGACGATGAGCTTCCTTTACTTCCTCCAGAAATTCAAGACTACCGTCCCGAAGGTTTTG GCCAGGGGCCATTAGCAAAAGTAAAAGAGTGGGTAGATATTCACGATAAGAAAACCAATCGTCAGGGGAGACGCGAGACG CATACCATGCCTCAATGGGCTGGGTCTTGTTGGTATTATTTGCGTTTTTGCGACGCGCTGAATTCGCAAGCACCCTGGTC TAATGAAAAAGAAAAATATTGGATGCCTGTAGACTTGTATATTGGGGGGGCTGAACATGCTGTTTTGCACTTATTGTATT CCCGTTTTTGGCACCGAGTGTTTTATGATGCAGGCATGGTTTCCACTCCAGAACCATTTAAAAAGTTGATAAATCAAGGC TTAGTGCTTGCAACTTCTTATCGGATTCCTGGTAAGGGATATGTCTATCCTGAAGATGCTCATGAGGATAATGGGGTATG GATGAGTACTTCCGGAGAGGAACTAGAAGTTCGTCAGGAAAAGATGTCTAAATCAAAGTTAAATGGAGTTGATCCTCAAA TTCTTATCGAAGAATTCGGAGCAGATGCTTTGCGTATGTACGCTATGTTTTCTGGTCCGCTAGATAAAAATAAGCTTTGG TGTAATCAAGGCGTTTCTGGTTGCCGACGCTTCCTCAATCGTTTTTATGAATTGGTCACGTCGTCTTTAGTTCAAGATAT TGATGATCCTAAGGGAATGTATTTAGCCCATAGATTAGTACATCGCGTAGGGGAAGATATTGAAAAAATGTCTTTAAACA CCATCCCATCTTCTTTTATGGAATTCATAAATGAGTTTGTGAAGCTTGATATTTATCCTAAATCTGCTTTAGCTATGGTT GTGCGGGCTTTAGCACCTATAGCACCTCATATCAGTGAGGAATTATGGACTATTTTAGGCAATGCTCCTGGTATAGATCA GGCTGGATGGCCAGAGGTGGATCCTAAATATTTGGAAGATACTTCGGTAACATTTGTCATTCAGGTAAATGGGAAGTTAC GAGCGCGTCTGGATATTAGTAAGAACGCGGCGCGGGAAGAAGTTTTATCTTTAGCACGAGAGGCTGTCTCTAGGTATCTA GAAGATAAAGAAGTGAAGAAGGAAATTTTCGTTCCAAATAGATTAGTGAATTTTGTGCTATGA
Upstream 100 bases:
>100_bases AATCTTTTAAGAACTCTGATTAGAAGATTCTTGTGTTTTCATTGAGTGAGAGATACACTAGCCTCTATTTTATTTTAACA GATCTCTTTGTCAGGATATT
Downstream 100 bases:
>100_bases TCAAACGACGACTAACTAAGTTACATACCTTCCTATACGATTGCTTTTTGATCTTGGCGTTTATAGTTGCGCTTCCTAGG ATTCTCTATAAAAGATTGGT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MRYDPSLIEKKWQEFWKEHKSFKANEADDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDS FGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPEYYRWTQKLFLLLYEKGLAYMADMAVNYCPE LGTVLSNEEVENGLSIEGGYPVERRMLRQWILRITAYSDQLLEGLEGLDWPENVKQLQRNWIGKSEGALVRFKVNNQNFL EVFTTRPDTLCGVSFLVIAPEHPEVGQLIAEDRREEVEAYICRAQSKSERDRISESKIKSGVFTGTYAKHPITGADIPIW VSDYVILGYGSGVVMGVPAHDERDREFAETFSLPIYEVLDTDGYCIHSNHGDFLLDGLWGREAQDYVIAYLQKKNLGESK VAYKLRDWLFSRQRYWGEPIPIIHFEDGTCRPLEDDELPLLPPEIQDYRPEGFGQGPLAKVKEWVDIHDKKTNRQGRRET HTMPQWAGSCWYYLRFCDALNSQAPWSNEKEKYWMPVDLYIGGAEHAVLHLLYSRFWHRVFYDAGMVSTPEPFKKLINQG LVLATSYRIPGKGYVYPEDAHEDNGVWMSTSGEELEVRQEKMSKSKLNGVDPQILIEEFGADALRMYAMFSGPLDKNKLW CNQGVSGCRRFLNRFYELVTSSLVQDIDDPKGMYLAHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPKSALAMV VRALAPIAPHISEELWTILGNAPGIDQAGWPEVDPKYLEDTSVTFVIQVNGKLRARLDISKNAAREEVLSLAREAVSRYL EDKEVKKEIFVPNRLVNFVL
Sequences:
>Translated_820_residues MRYDPSLIEKKWQEFWKEHKSFKANEADDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDS FGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPEYYRWTQKLFLLLYEKGLAYMADMAVNYCPE LGTVLSNEEVENGLSIEGGYPVERRMLRQWILRITAYSDQLLEGLEGLDWPENVKQLQRNWIGKSEGALVRFKVNNQNFL EVFTTRPDTLCGVSFLVIAPEHPEVGQLIAEDRREEVEAYICRAQSKSERDRISESKIKSGVFTGTYAKHPITGADIPIW VSDYVILGYGSGVVMGVPAHDERDREFAETFSLPIYEVLDTDGYCIHSNHGDFLLDGLWGREAQDYVIAYLQKKNLGESK VAYKLRDWLFSRQRYWGEPIPIIHFEDGTCRPLEDDELPLLPPEIQDYRPEGFGQGPLAKVKEWVDIHDKKTNRQGRRET HTMPQWAGSCWYYLRFCDALNSQAPWSNEKEKYWMPVDLYIGGAEHAVLHLLYSRFWHRVFYDAGMVSTPEPFKKLINQG LVLATSYRIPGKGYVYPEDAHEDNGVWMSTSGEELEVRQEKMSKSKLNGVDPQILIEEFGADALRMYAMFSGPLDKNKLW CNQGVSGCRRFLNRFYELVTSSLVQDIDDPKGMYLAHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPKSALAMV VRALAPIAPHISEELWTILGNAPGIDQAGWPEVDPKYLEDTSVTFVIQVNGKLRARLDISKNAAREEVLSLAREAVSRYL EDKEVKKEIFVPNRLVNFVL >Mature_820_residues MRYDPSLIEKKWQEFWKEHKSFKANEADDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGFSVLHPMGWDS FGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPEYYRWTQKLFLLLYEKGLAYMADMAVNYCPE LGTVLSNEEVENGLSIEGGYPVERRMLRQWILRITAYSDQLLEGLEGLDWPENVKQLQRNWIGKSEGALVRFKVNNQNFL EVFTTRPDTLCGVSFLVIAPEHPEVGQLIAEDRREEVEAYICRAQSKSERDRISESKIKSGVFTGTYAKHPITGADIPIW VSDYVILGYGSGVVMGVPAHDERDREFAETFSLPIYEVLDTDGYCIHSNHGDFLLDGLWGREAQDYVIAYLQKKNLGESK VAYKLRDWLFSRQRYWGEPIPIIHFEDGTCRPLEDDELPLLPPEIQDYRPEGFGQGPLAKVKEWVDIHDKKTNRQGRRET HTMPQWAGSCWYYLRFCDALNSQAPWSNEKEKYWMPVDLYIGGAEHAVLHLLYSRFWHRVFYDAGMVSTPEPFKKLINQG LVLATSYRIPGKGYVYPEDAHEDNGVWMSTSGEELEVRQEKMSKSKLNGVDPQILIEEFGADALRMYAMFSGPLDKNKLW CNQGVSGCRRFLNRFYELVTSSLVQDIDDPKGMYLAHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPKSALAMV VRALAPIAPHISEELWTILGNAPGIDQAGWPEVDPKYLEDTSVTFVIQVNGKLRARLDISKNAAREEVLSLAREAVSRYL EDKEVKKEIFVPNRLVNFVL
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=870, Percent_Identity=34.5977011494253, Blast_Score=471, Evalue=1e-132, Organism=Homo sapiens, GI94721239, Length=180, Percent_Identity=30, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI94721241, Length=180, Percent_Identity=30, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1786861, Length=871, Percent_Identity=41.4466130884041, Blast_Score=619, Evalue=1e-178, Organism=Escherichia coli, GI1790708, Length=379, Percent_Identity=25.065963060686, Blast_Score=93, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71997510, Length=815, Percent_Identity=28.4662576687117, Blast_Score=285, Evalue=8e-77, Organism=Caenorhabditis elegans, GI71997517, Length=812, Percent_Identity=28.5714285714286, Blast_Score=284, Evalue=1e-76, Organism=Caenorhabditis elegans, GI212645227, Length=375, Percent_Identity=28.2666666666667, Blast_Score=131, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323414, Length=876, Percent_Identity=34.4748858447489, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6321531, Length=418, Percent_Identity=25.3588516746411, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21355409, Length=869, Percent_Identity=33.0264672036824, Blast_Score=417, Evalue=1e-116, Organism=Drosophila melanogaster, GI17864482, Length=445, Percent_Identity=23.8202247191011, Blast_Score=97, Evalue=6e-20, Organism=Drosophila melanogaster, GI24653289, Length=445, Percent_Identity=23.8202247191011, Blast_Score=97, Evalue=6e-20,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 94248; Mature: 94248
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYDPSLIEKKWQEFWKEHKSFKANEADDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH VARYKRAKGFSVLHPMGWDSFGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDE HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GREFATSDPEYYRWTQKLFLLLYEKGLAYMADMAVNYCPELGTVLSNEEVENGLSIEGGY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHCCCCCCCCC PVERRMLRQWILRITAYSDQLLEGLEGLDWPENVKQLQRNWIGKSEGALVRFKVNNQNFL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEE EVFTTRPDTLCGVSFLVIAPEHPEVGQLIAEDRREEVEAYICRAQSKSERDRISESKIKS EEEECCCCHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GVFTGTYAKHPITGADIPIWVSDYVILGYGSGVVMGVPAHDERDREFAETFSLPIYEVLD CCEECCCCCCCCCCCCCCEEEECEEEEEECCCEEEECCCCCCHHHHHHHHHCCCHHHHHC TDGYCIHSNHGDFLLDGLWGREAQDYVIAYLQKKNLGESKVAYKLRDWLFSRQRYWGEPI CCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC PIIHFEDGTCRPLEDDELPLLPPEIQDYRPEGFGQGPLAKVKEWVDIHDKKTNRQGRRET CEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH HTMPQWAGSCWYYLRFCDALNSQAPWSNEKEKYWMPVDLYIGGAEHAVLHLLYSRFWHRV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH FYDAGMVSTPEPFKKLINQGLVLATSYRIPGKGYVYPEDAHEDNGVWMSTSGEELEVRQE HHCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHH KMSKSKLNGVDPQILIEEFGADALRMYAMFSGPLDKNKLWCNQGVSGCRRFLNRFYELVT HHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH SSLVQDIDDPKGMYLAHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPKSALAMV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHH VRALAPIAPHISEELWTILGNAPGIDQAGWPEVDPKYLEDTSVTFVIQVNGKLRARLDIS HHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCEEEEEECC KNAAREEVLSLAREAVSRYLEDKEVKKEIFVPNRLVNFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MRYDPSLIEKKWQEFWKEHKSFKANEADDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH VARYKRAKGFSVLHPMGWDSFGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDE HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GREFATSDPEYYRWTQKLFLLLYEKGLAYMADMAVNYCPELGTVLSNEEVENGLSIEGGY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHCCCCCCCCC PVERRMLRQWILRITAYSDQLLEGLEGLDWPENVKQLQRNWIGKSEGALVRFKVNNQNFL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEE EVFTTRPDTLCGVSFLVIAPEHPEVGQLIAEDRREEVEAYICRAQSKSERDRISESKIKS EEEECCCCHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GVFTGTYAKHPITGADIPIWVSDYVILGYGSGVVMGVPAHDERDREFAETFSLPIYEVLD CCEECCCCCCCCCCCCCCEEEECEEEEEECCCEEEECCCCCCHHHHHHHHHCCCHHHHHC TDGYCIHSNHGDFLLDGLWGREAQDYVIAYLQKKNLGESKVAYKLRDWLFSRQRYWGEPI CCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC PIIHFEDGTCRPLEDDELPLLPPEIQDYRPEGFGQGPLAKVKEWVDIHDKKTNRQGRRET CEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH HTMPQWAGSCWYYLRFCDALNSQAPWSNEKEKYWMPVDLYIGGAEHAVLHLLYSRFWHRV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHH FYDAGMVSTPEPFKKLINQGLVLATSYRIPGKGYVYPEDAHEDNGVWMSTSGEELEVRQE HHCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHH KMSKSKLNGVDPQILIEEFGADALRMYAMFSGPLDKNKLWCNQGVSGCRRFLNRFYELVT HHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH SSLVQDIDDPKGMYLAHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPKSALAMV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHH VRALAPIAPHISEELWTILGNAPGIDQAGWPEVDPKYLEDTSVTFVIQVNGKLRARLDIS HHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCEEEEEECC KNAAREEVLSLAREAVSRYLEDKEVKKEIFVPNRLVNFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12682364 [H]