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The map label for this gene is rplJ [H]

Identifier: 89898125

GI number: 89898125

Start: 363208

End: 363720

Strand: Direct

Name: rplJ [H]

Synonym: CF0318

Alternate gene names: 89898125

Gene position: 363208-363720 (Clockwise)

Preceding gene: 89898124

Following gene: 89898127

Centisome position: 31.14

GC content: 38.01

Gene sequence:

>513_bases
ATGAAAGAAGAAAAGAAGTTACTTCTTCAAGAGGTAGAAGAGAAAATCTCCGCATCCCAAGGTTTTATTTTATTAAGATA
TCTTGGATTTACGGCTGCGCATTCTAGAGAGTTTCGTAATTCACTCTCTGGAGTTTCTGCAGAATTTGAAGTGTTAAAAA
AGAGAATTTTTTTCAAAGCTATACAAAGTGCTGGTTTTGATATAGATTCTTCAGATACGAGCGGACATCTAGGCGTAGTG
TTTGCTTATGATGACGCTGTTTCTGCTGCAAAACAAGTTTTAGATTTTAATAAACAACATAACGATTCACTAGTTTTTCT
CGCTGGACGAATTGATAGCGCCAACTTGTCTGGCAAAGAAGTAGAGGCTGTTGCCAAATTGCCTTCAATGAAAGAACTAA
GACAGCAAATTGTTGGGCTAATAGCTGCTCCGATGTCTCAGGTCGTTGGAATTATGGGCTCGGCTCTTTCTGGTGTTGTT
TCCTGTATCGACCAGAAAATACAAAAAAACTAA

Upstream 100 bases:

>100_bases
AAGGGGCAGTATCTAGTGTCATTTACCGTTTCTTCAACCATGGGACCTGGTATTTCTGTTGATACTAGAGAGTTAATGGC
GTCTTAATTCAAGAGGGAAA

Downstream 100 bases:

>100_bases
GAAGAATGTTAAAACTCTCAAATTAAGTAAGGGTGACAAAAGTGACAACACAAAGTTTGGAAACTTTAGTAGAGATGTTA
AGCAACTTAACAGTACTCCA

Product: 50S ribosomal protein L10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKEEKKLLLQEVEEKISASQGFILLRYLGFTAAHSREFRNSLSGVSAEFEVLKKRIFFKAIQSAGFDIDSSDTSGHLGVV
FAYDDAVSAAKQVLDFNKQHNDSLVFLAGRIDSANLSGKEVEAVAKLPSMKELRQQIVGLIAAPMSQVVGIMGSALSGVV
SCIDQKIQKN

Sequences:

>Translated_170_residues
MKEEKKLLLQEVEEKISASQGFILLRYLGFTAAHSREFRNSLSGVSAEFEVLKKRIFFKAIQSAGFDIDSSDTSGHLGVV
FAYDDAVSAAKQVLDFNKQHNDSLVFLAGRIDSANLSGKEVEAVAKLPSMKELRQQIVGLIAAPMSQVVGIMGSALSGVV
SCIDQKIQKN
>Mature_170_residues
MKEEKKLLLQEVEEKISASQGFILLRYLGFTAAHSREFRNSLSGVSAEFEVLKKRIFFKAIQSAGFDIDSSDTSGHLGVV
FAYDDAVSAAKQVLDFNKQHNDSLVFLAGRIDSANLSGKEVEAVAKLPSMKELRQQIVGLIAAPMSQVVGIMGSALSGVV
SCIDQKIQKN

Specific function: Unknown

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022973
- InterPro:   IPR001790
- InterPro:   IPR002363 [H]

Pfam domain/function: PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 18494; Mature: 18494

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS01109 RIBOSOMAL_L10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEKKLLLQEVEEKISASQGFILLRYLGFTAAHSREFRNSLSGVSAEFEVLKKRIFFKA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IQSAGFDIDSSDTSGHLGVVFAYDDAVSAAKQVLDFNKQHNDSLVFLAGRIDSANLSGKE
HHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHH
VEAVAKLPSMKELRQQIVGLIAAPMSQVVGIMGSALSGVVSCIDQKIQKN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEEKKLLLQEVEEKISASQGFILLRYLGFTAAHSREFRNSLSGVSAEFEVLKKRIFFKA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IQSAGFDIDSSDTSGHLGVVFAYDDAVSAAKQVLDFNKQHNDSLVFLAGRIDSANLSGKE
HHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHH
VEAVAKLPSMKELRQQIVGLIAAPMSQVVGIMGSALSGVVSCIDQKIQKN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA