| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
Click here to switch to the map view.
The map label for this gene is 89898080
Identifier: 89898080
GI number: 89898080
Start: 319603
End: 320325
Strand: Direct
Name: 89898080
Synonym: CF0273
Alternate gene names: NA
Gene position: 319603-320325 (Clockwise)
Preceding gene: 89898079
Following gene: 89898085
Centisome position: 27.4
GC content: 35.41
Gene sequence:
>723_bases ATGTCGTATTCCAACCGCCTAAAGAGCTTCGCAACTAAAAAGTCCTCTTTCCTATATATATTGCGAGTAGTGATTCACAG AATGTGGTTCTCTGTTAGGGAATATGTTTATCTATCCTGCTCGCTTTATGTTAAGTACCCAAAATTAGTTATATATGATC TAGCGAAGTTCTTGTATTCTTTATTGAGAAGTCCCTACAGAAAATTGCGCCGTTCTTCTCAATCCTCGTTATTAAAAGAA GGAAATGTATACGGAGAGTCCCCCTGGTCGGTTTTAAATAAAGTAAGCAAGGAATTCGGAGTGACTTCTCAAGATGTTGT TTATGACTTAGGATGTGGATTAGGGAAGGTTTGCTTTTGGTTTTCTCACGTTTTGAGATGTCAGGTTGTTGGTATAGATA ATCAGTCTGATTTTATTCGTTTTTCCTCTCGTATACACCGCTTGTTGTCTTTACAGACGGCAGTTTTTTTTAAAGAATAT TTTTATGAAACACAATTGTCACAAGCTTCTTGTGTCTATTTTTATGGTTCCTCGTATTCTTTAAAGGTGTTAAAAAGTGT TTTAACAGTTTTAAAAGAACTAAAACCAGGAAATATGGTTATTAGTATTTCCTTTCCTTTAGATTCTCTGCCTGGAGGTG ATTTGCTATTTTTCACGGAAAAAAGTTGCGATGTTACCTTCCCTTGGGGAAAGACAAAAGCGTATAAAAATATACGAAAA TAG
Upstream 100 bases:
>100_bases GGAGCATCTACTCCCGAGAATATAGTTCAACTTTGTATTTCTAGGTTGAAAGAATTAATTCCCGATTTACAAGTTGAAGA AGATATATTTGCTATAGAAG
Downstream 100 bases:
>100_bases ATGTGCCCTATTGATAAAGACTGCGAACGGCATCATGTTCTGTTTGTAATACTTGCAGAAGGAAATTGTCCATGTTTTTC CAATGGTCTTTCACTTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSYSNRLKSFATKKSSFLYILRVVIHRMWFSVREYVYLSCSLYVKYPKLVIYDLAKFLYSLLRSPYRKLRRSSQSSLLKE GNVYGESPWSVLNKVSKEFGVTSQDVVYDLGCGLGKVCFWFSHVLRCQVVGIDNQSDFIRFSSRIHRLLSLQTAVFFKEY FYETQLSQASCVYFYGSSYSLKVLKSVLTVLKELKPGNMVISISFPLDSLPGGDLLFFTEKSCDVTFPWGKTKAYKNIRK
Sequences:
>Translated_240_residues MSYSNRLKSFATKKSSFLYILRVVIHRMWFSVREYVYLSCSLYVKYPKLVIYDLAKFLYSLLRSPYRKLRRSSQSSLLKE GNVYGESPWSVLNKVSKEFGVTSQDVVYDLGCGLGKVCFWFSHVLRCQVVGIDNQSDFIRFSSRIHRLLSLQTAVFFKEY FYETQLSQASCVYFYGSSYSLKVLKSVLTVLKELKPGNMVISISFPLDSLPGGDLLFFTEKSCDVTFPWGKTKAYKNIRK >Mature_239_residues SYSNRLKSFATKKSSFLYILRVVIHRMWFSVREYVYLSCSLYVKYPKLVIYDLAKFLYSLLRSPYRKLRRSSQSSLLKEG NVYGESPWSVLNKVSKEFGVTSQDVVYDLGCGLGKVCFWFSHVLRCQVVGIDNQSDFIRFSSRIHRLLSLQTAVFFKEYF YETQLSQASCVYFYGSSYSLKVLKSVLTVLKELKPGNMVISISFPLDSLPGGDLLFFTEKSCDVTFPWGKTKAYKNIRK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27816; Mature: 27685
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSNRLKSFATKKSSFLYILRVVIHRMWFSVREYVYLSCSLYVKYPKLVIYDLAKFLYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHH LLRSPYRKLRRSSQSSLLKEGNVYGESPWSVLNKVSKEFGVTSQDVVYDLGCGLGKVCFW HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHH FSHVLRCQVVGIDNQSDFIRFSSRIHRLLSLQTAVFFKEYFYETQLSQASCVYFYGSSYS HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH LKVLKSVLTVLKELKPGNMVISISFPLDSLPGGDLLFFTEKSCDVTFPWGKTKAYKNIRK HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHCCC >Mature Secondary Structure SYSNRLKSFATKKSSFLYILRVVIHRMWFSVREYVYLSCSLYVKYPKLVIYDLAKFLYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHH LLRSPYRKLRRSSQSSLLKEGNVYGESPWSVLNKVSKEFGVTSQDVVYDLGCGLGKVCFW HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHH FSHVLRCQVVGIDNQSDFIRFSSRIHRLLSLQTAVFFKEYFYETQLSQASCVYFYGSSYS HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH LKVLKSVLTVLKELKPGNMVISISFPLDSLPGGDLLFFTEKSCDVTFPWGKTKAYKNIRK HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA