| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
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The map label for this gene is mhcB2
Identifier: 89898025
GI number: 89898025
Start: 257034
End: 258179
Strand: Direct
Name: mhcB2
Synonym: CF0218
Alternate gene names: NA
Gene position: 257034-258179 (Clockwise)
Preceding gene: 89898024
Following gene: 89898026
Centisome position: 22.04
GC content: 37.87
Gene sequence:
>1146_bases ATGACAACAAACTCATTGAACATAGGTTCTAGTTCAGCCACTGTGGTAAATTCTGTAGTACAAAAACAGCCACTTTGGAA AGTGTCTTTAAATAAATATCAACAGGTTGCTGCTGCTATTATTCTTATAGCAGGCTTGGTTCTCATTGGTTCTTTAGTAG GTGCTTTGGTGTTCTTTGCATTGACAGGACCTTCTGTTCTTTTTGCTGCTATGTTGATGGCTCTTGTTTCTGGTGTTGTT CTTATCGCTATGGCAGGGTATCAGTTGGCTGTAGGAGTTCGAAAAGATGCAAAAGAGAGACAGCTGGTTCATGAAAAAAT ACAGTATGAAGTTGAAGCAGCATTGCTAAAAGATAACAATAAGCTCATCGAAAGAAAATTAGAGGAGTTGCAAAAACACA GCGATGCATTGACAGGACAATTGCTAGGTTTGGCGGGTGATTTAGAATGTTTAAAACAAGAGAAAATAGACTTAGAAGCT AGAGTTATGGATTTGCAGCGTCAGAATGCTTCTTTGAGCAAATTAATGGAGGAAGGACGTCCAGACTTAGTTGCCGAAAT AGAAAACCAAAGAAAACAGTGCAAAAACCTCCAGGAGCTTCTTCTTCAAGCTGAAGAAAAAAATAAAAGTTTAGAGAGCA CAGTCAAAAAATGTCAAACAGAGTTAATGATTGTGGAACAGCAAAATACTCTACTTATAGAGAGAAATAAAGAACTCAAA GTTCAGAAAGCAGCGCTTGAAAAGATGTTAGAAGACAGCAAGCAAGAAATTAAGATTTTAAAAGAGGTTCTCGCAGATTT TGAGGCCATGAATATACCAGGCAACATTGCAGAGTTACAAGCAAAGATTGAGGAACAAAAATTAGAGCTCGAATCTCTTA AAGATCAAGCAGAAAAGCTACTTTTAGAGAAAGATGCGGTAATGAAAGAAAGTCAGGATCTCAAAGACCTGTTAAACTCT AGTAAATTAGAGATAAGCAAGAATAAATTAGATATAAGCAAGTTGCAATCTGAATTAGAGAGTTTGCAATCACAACCTCA TGGAGATGACGGTGCAGATGTAGATGTTCAAGAAGGTGCTGAAGGTGATGCTGGCGACAATGATGTGGCGGGCAGCGAAG AGCATACTAATGATGACGCTAATTAA
Upstream 100 bases:
>100_bases TTACTAAAGCTTTTTGTGGGCTAGTTATATAAAGTTCTTGCATTTAAAGGGTTGCGACGGTTTCACTGTTTTAAGTTTAG TTTACTCAAGAGAGCGGTTT
Downstream 100 bases:
>100_bases TCTGCGATAATTATTACGAAATAAGAAGATGAGAACCCGTGTTCGCTTCTTTTTAAATTAATATTATAAGTTCTATTGAC CCTATTGAGTAAATAGGGTC
Product: myosin heavy chain form B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTTNSLNIGSSSATVVNSVVQKQPLWKVSLNKYQQVAAAIILIAGLVLIGSLVGALVFFALTGPSVLFAAMLMALVSGVV LIAMAGYQLAVGVRKDAKERQLVHEKIQYEVEAALLKDNNKLIERKLEELQKHSDALTGQLLGLAGDLECLKQEKIDLEA RVMDLQRQNASLSKLMEEGRPDLVAEIENQRKQCKNLQELLLQAEEKNKSLESTVKKCQTELMIVEQQNTLLIERNKELK VQKAALEKMLEDSKQEIKILKEVLADFEAMNIPGNIAELQAKIEEQKLELESLKDQAEKLLLEKDAVMKESQDLKDLLNS SKLEISKNKLDISKLQSELESLQSQPHGDDGADVDVQEGAEGDAGDNDVAGSEEHTNDDAN
Sequences:
>Translated_381_residues MTTNSLNIGSSSATVVNSVVQKQPLWKVSLNKYQQVAAAIILIAGLVLIGSLVGALVFFALTGPSVLFAAMLMALVSGVV LIAMAGYQLAVGVRKDAKERQLVHEKIQYEVEAALLKDNNKLIERKLEELQKHSDALTGQLLGLAGDLECLKQEKIDLEA RVMDLQRQNASLSKLMEEGRPDLVAEIENQRKQCKNLQELLLQAEEKNKSLESTVKKCQTELMIVEQQNTLLIERNKELK VQKAALEKMLEDSKQEIKILKEVLADFEAMNIPGNIAELQAKIEEQKLELESLKDQAEKLLLEKDAVMKESQDLKDLLNS SKLEISKNKLDISKLQSELESLQSQPHGDDGADVDVQEGAEGDAGDNDVAGSEEHTNDDAN >Mature_380_residues TTNSLNIGSSSATVVNSVVQKQPLWKVSLNKYQQVAAAIILIAGLVLIGSLVGALVFFALTGPSVLFAAMLMALVSGVVL IAMAGYQLAVGVRKDAKERQLVHEKIQYEVEAALLKDNNKLIERKLEELQKHSDALTGQLLGLAGDLECLKQEKIDLEAR VMDLQRQNASLSKLMEEGRPDLVAEIENQRKQCKNLQELLLQAEEKNKSLESTVKKCQTELMIVEQQNTLLIERNKELKV QKAALEKMLEDSKQEIKILKEVLADFEAMNIPGNIAELQAKIEEQKLELESLKDQAEKLLLEKDAVMKESQDLKDLLNSS KLEISKNKLDISKLQSELESLQSQPHGDDGADVDVQEGAEGDAGDNDVAGSEEHTNDDAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42046; Mature: 41915
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNSLNIGSSSATVVNSVVQKQPLWKVSLNKYQQVAAAIILIAGLVLIGSLVGALVFFA CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGPSVLFAAMLMALVSGVVLIAMAGYQLAVGVRKDAKERQLVHEKIQYEVEAALLKDNN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH KLIERKLEELQKHSDALTGQLLGLAGDLECLKQEKIDLEARVMDLQRQNASLSKLMEEGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCC PDLVAEIENQRKQCKNLQELLLQAEEKNKSLESTVKKCQTELMIVEQQNTLLIERNKELK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCEEEECCCHHH VQKAALEKMLEDSKQEIKILKEVLADFEAMNIPGNIAELQAKIEEQKLELESLKDQAEKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKDAVMKESQDLKDLLNSSKLEISKNKLDISKLQSELESLQSQPHGDDGADVDVQEGA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC EGDAGDNDVAGSEEHTNDDAN CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTNSLNIGSSSATVVNSVVQKQPLWKVSLNKYQQVAAAIILIAGLVLIGSLVGALVFFA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGPSVLFAAMLMALVSGVVLIAMAGYQLAVGVRKDAKERQLVHEKIQYEVEAALLKDNN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCH KLIERKLEELQKHSDALTGQLLGLAGDLECLKQEKIDLEARVMDLQRQNASLSKLMEEGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCCC PDLVAEIENQRKQCKNLQELLLQAEEKNKSLESTVKKCQTELMIVEQQNTLLIERNKELK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCEEEECCCHHH VQKAALEKMLEDSKQEIKILKEVLADFEAMNIPGNIAELQAKIEEQKLELESLKDQAEKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKDAVMKESQDLKDLLNSSKLEISKNKLDISKLQSELESLQSQPHGDDGADVDVQEGA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC EGDAGDNDVAGSEEHTNDDAN CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA