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The map label for this gene is snf2 [C]

Identifier: 89897903

GI number: 89897903

Start: 108974

End: 112471

Strand: Direct

Name: snf2 [C]

Synonym: CF0096

Alternate gene names: 89897903

Gene position: 108974-112471 (Clockwise)

Preceding gene: 89897896

Following gene: 89897904

Centisome position: 9.34

GC content: 38.51

Gene sequence:

>3498_bases
ATGCTCAATTTTCGCAAATTACGCAGGGATTTTACAGCTAACATTTTGCAAGATGGCAAGGAACTTTTTGATCAAGGAGC
TGTGATTAATGCGAAAATCCTGTCTATGAACGGAGAGTCAGTGTGTATAGGAGCACAGATTCGAGGCTTGTATGACAACG
TATATGAATGTGAAATAGAAGTCGATCGATCGAAATCCGATACTATAGATTCTAACTGTGACTGCTCTTATAACTACGAT
TGCCAGCATATAGTGGCGCTACTATTTTATTTGGAGAAGTACTTTAATGAAATGGTAGTGGCTTATTCCCAAGAGGCTAA
TCTAGAGACAAATCAAGAGATAAATGAGGAAGTTAAAAAAGAACTTCAGGAAACTTTTGTTGTTGCTGCAAGTAGGGAAG
AAGAGAGAAAAGATCGCGAGCATCAAAAAGAGATCTTAAGTGAATATATTCACGCGGCTAATGTATTAAGTGCAAATCCA
TTTTTCCTCCCTCAGGAGTATTTAGAAAAGAACTCTGCGGAACTTGCCGTTTTATTTGTTTCTTCAAGTGATGAGGTGTT
CCGCCCAAATCAGCATGTTGAATTTCAATTGGTTTTACGTCTTCCAGGACGTTCTAAGCCATTTTATATTTCAAATATTA
AAACTTTCCTTGAAGGAGTTTTGTATCAAGAGCCGATTATTCTTAATGGACGTCGTTTCTTTTTCACAATGCAATCCTTT
AATGCTTCAGATCGCAAGCTTATAGATTTACTCATTCGTTACGTTCGTTATGCTAATCAAGCCCCTGAAGAGAAGTTATT
AAAATCAGCTTATTTGACGCCCACATCTCTGGGGGTAATTTTAGCTAAGATGCATGAACATCAAATGGCTGATCGAGGGG
GAGGACAATCTGGAGAAAAAGAAAGTTTTTCTGGGATGTTCTGTGGGAATCTTGAAGAACCCTTATACTGGTCGGTTTCT
CCGGCTAAGATGAAGTTTGATTTAGATTTCTTTGACACTCCCTACAAAGCAGTGTTAATGACACCTTTAATTCTTGTAGA
TGATGAAACTCTTCAGCCTGAGCAAGCGATTCTTTTAGAGTCTAATGTCCCTGGGATTATTCATAAAAATGTTTATCATC
ATTTTGCGCTTCAAATTCGACGTGCGCATTTACGCTCTTTCTCAAGATTGCGAGACATTACTATTCCAGAAGCATTGTTC
GGTTCTTTCTTAGAAAATGCTCTTCCTGTGTTTAAGGAGTACGCAGAAGTTTCCAATGTCGAAGTTCTAAATTCCTTTGT
CACGCTTCCCTATGTTGAGGATATTCATGGCGAATGTAACATCAGTTATTTAGATGGGGAATTAGAGGCGAAGTTGTATT
TCATCTACGATTCTCTAAAGATTCCGGCTGCTGCGTTTTCTTTGAAATATCAAGATGTTCGTGCTTTTATTCGTGAGGAT
GGAATTTTAGCTAGGAACCTTGTTGAAGAGCGTAAGATTATAGAAGAGGTCTTCTCTGGTTTTATTTATGACGAGCGTGA
TGGGGCTTTTCATGTAAAAAGTGAGAAGAAGATCGTAGAGTTTATGACAGAGACAATTCCCAATAACCAGCACAGGATTA
CTTTTAACTGTCCTGAGACTCTTTCGGATCAGTTTATTTATGATGAAACAGTCTTTGATCTTTCCTTTAGAGAGGGGACT
GAAATCAATACCTATGAAGCGGAGCTTAAAGTTAATGGGTTATTGAAAGGAATTAGCTTAGACTTGCTATGGGATTGCAT
AAGTGCCAAAAAACGTTTCTTGGAGTTGCCTAAGAAAGGACGCGTCAAAACCTCTCGAAGAGGTAGGTCTGCGGGTTCTG
CAAAGCTTCCGTGTATTTTAGTTTTAGATTTAGAAAAAATCTCTCCAGTCATTCAAATCTTTAATGAAATAGGCTTTAAA
GTTTTGGATGATTTTGTAGAAAAGTGTCCTTTATGGAGTTTGACGGGTATTTCTCCCGAGCTTTTCAAAGGGTTGCCGGT
GAATTTCACAATGACGGACAAACTGGCTGAAATACAAAAGCAAATTCGTGGAGAGGTTGATTTTGCTTTCCAAGATGTTC
CTAAACAGATTCAGGCAACATTGCGTAGTTACCAAACAGAAGGAATTCATTGGTTAGAGCGTCTTAGAAAAATGCACCTT
AATGGTATTCTTGCTGATGACATGGGGCTTGGAAAGACTTTACAAGCCATTATTGCAATTACACAAAGCAAATTGGAGAA
GGGGAAAGGTTGTTCTTTGATAGTCTGCCCTACGTCTTTGGTGTATAACTGGAAAGAAGAATTTCGTAAGTTCAATCCAG
AATTTAAGACTATGATTGTTGATGGGGTGCCTTCGTATAGACGTAGGCAGCTTGCAGATTTATCGGATTATGATGTTGCT
ATCACATCTTACAACCTATTGCAAAAGGATATCGATATTTATAAGGATTTTGTCTTTGACTACGTAGTTTTAGACGAAGC
TCATCATATTAAGAACCGAACGACTCGTAATGCGAAATCTGTAAAAATGATTCGTTCGGGGCACAGGTTAATCTTAACAG
GTACTCCAATAGAAAATTCTTTAGAAGAATTATGGAGTTTGTTCGATTTCTTGATGCCAGGTTTATTGAGTAGTTACGAT
CGATTTGTTGGTAAATACATTCGCACAGGCAATTATATGGGCAATAAGACCGATAATATGATTGCTTTGAAGAAGAAGGT
TGCTCCTTTTATTCTTCGTCGTATGAAAGAGGATGTGTTAGAAGATTTGCCTCCTGTTTCAGAAATTCTGTATCATTGTC
ACCTTACAGAGTCTCAGAGAGAGCTTTACCATTCCTACGCTGCTTCAGCTAAGAAAGAGCTTTCTCGTTTGGTTAAACAA
GAAGGGTTTGATCGTATACATATTCATGTTCTTGCAACGCTTACGCGTTTAAAGCAAATTTGTTGTCATCCAGCGATTTT
TGCAAAAGATGTTCCTGAGCCGGGTGATTCTGCAAAGTATGACTTGCTTATGGATCTTCTTTCCTCTCTTGTGGAAACAG
GACATAAGACAGTTCTCTTTAGTCAGTACACTAAGATGTTAAGCATCATTAAAAAGGACTTAGAGGCTTCTGGGGTTCGC
TTTGTTTATTTAGATGGTTCCACCAAGAACAGATTAGAGCTTGTTAACCAGTTTAACGAGGATCCAGGATTATTGGTCTT
CTTAATTTCGTTAAAAGCTGGAGGCACTGGTTTGAATCTTGTTGGTGCGGATACAGTGATTCACTACGATATGTGGTGGA
ACCCTGCTGTAGAAAATCAGGCTACGGATCGGGTGCATCGTATAGGACAGAATCGCTCAGTGTCTTCGTATAAGCTAGTT
ACGTTAAACACCATCGAGGAAAAAATTCTAACTCTCCAAAATAGGAAAAAGAGCCTTGTAAAGAAAGTGATCAACTCTGA
TGATGAAGTCGTTTCCAAGTTGACTTGGGAAGAAGTGTTAGAATTGCTACAGATATGA

Upstream 100 bases:

>100_bases
ATACAAGAGAAAATGGGTGGTAAAATTTTTCATTGATTTAGCGTGGGTAAACAGGTACAAGTAAGCTGATTCAATCAGAA
CTCCATAATTTAGAGGAGAA

Downstream 100 bases:

>100_bases
TGCTATGAGCCCACATCGAAGCTTATTTAAAATAAAAAATCTTTCCAATCGATTGTACAACAAGACTTTAGGCCGTTTTG
ATAAAGTTTTCAACTTTTTT

Product: SWF/SNF family helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1165; Mature: 1165

Protein sequence:

>1165_residues
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQIRGLYDNVYECEIEVDRSKSDTIDSNCDCSYNYD
CQHIVALLFYLEKYFNEMVVAYSQEANLETNQEINEEVKKELQETFVVAASREEERKDREHQKEILSEYIHAANVLSANP
FFLPQEYLEKNSAELAVLFVSSSDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
NASDRKLIDLLIRYVRYANQAPEEKLLKSAYLTPTSLGVILAKMHEHQMADRGGGQSGEKESFSGMFCGNLEEPLYWSVS
PAKMKFDLDFFDTPYKAVLMTPLILVDDETLQPEQAILLESNVPGIIHKNVYHHFALQIRRAHLRSFSRLRDITIPEALF
GSFLENALPVFKEYAEVSNVEVLNSFVTLPYVEDIHGECNISYLDGELEAKLYFIYDSLKIPAAAFSLKYQDVRAFIRED
GILARNLVEERKIIEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPETLSDQFIYDETVFDLSFREGT
EINTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKKGRVKTSRRGRSAGSAKLPCILVLDLEKISPVIQIFNEIGFK
VLDDFVEKCPLWSLTGISPELFKGLPVNFTMTDKLAEIQKQIRGEVDFAFQDVPKQIQATLRSYQTEGIHWLERLRKMHL
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMIVDGVPSYRRRQLADLSDYDVA
ITSYNLLQKDIDIYKDFVFDYVVLDEAHHIKNRTTRNAKSVKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYD
RFVGKYIRTGNYMGNKTDNMIALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTESQRELYHSYAASAKKELSRLVKQ
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKMLSIIKKDLEASGVR
FVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLV
TLNTIEEKILTLQNRKKSLVKKVINSDDEVVSKLTWEEVLELLQI

Sequences:

>Translated_1165_residues
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQIRGLYDNVYECEIEVDRSKSDTIDSNCDCSYNYD
CQHIVALLFYLEKYFNEMVVAYSQEANLETNQEINEEVKKELQETFVVAASREEERKDREHQKEILSEYIHAANVLSANP
FFLPQEYLEKNSAELAVLFVSSSDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
NASDRKLIDLLIRYVRYANQAPEEKLLKSAYLTPTSLGVILAKMHEHQMADRGGGQSGEKESFSGMFCGNLEEPLYWSVS
PAKMKFDLDFFDTPYKAVLMTPLILVDDETLQPEQAILLESNVPGIIHKNVYHHFALQIRRAHLRSFSRLRDITIPEALF
GSFLENALPVFKEYAEVSNVEVLNSFVTLPYVEDIHGECNISYLDGELEAKLYFIYDSLKIPAAAFSLKYQDVRAFIRED
GILARNLVEERKIIEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPETLSDQFIYDETVFDLSFREGT
EINTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKKGRVKTSRRGRSAGSAKLPCILVLDLEKISPVIQIFNEIGFK
VLDDFVEKCPLWSLTGISPELFKGLPVNFTMTDKLAEIQKQIRGEVDFAFQDVPKQIQATLRSYQTEGIHWLERLRKMHL
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMIVDGVPSYRRRQLADLSDYDVA
ITSYNLLQKDIDIYKDFVFDYVVLDEAHHIKNRTTRNAKSVKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYD
RFVGKYIRTGNYMGNKTDNMIALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTESQRELYHSYAASAKKELSRLVKQ
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKMLSIIKKDLEASGVR
FVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLV
TLNTIEEKILTLQNRKKSLVKKVINSDDEVVSKLTWEEVLELLQI
>Mature_1165_residues
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQIRGLYDNVYECEIEVDRSKSDTIDSNCDCSYNYD
CQHIVALLFYLEKYFNEMVVAYSQEANLETNQEINEEVKKELQETFVVAASREEERKDREHQKEILSEYIHAANVLSANP
FFLPQEYLEKNSAELAVLFVSSSDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
NASDRKLIDLLIRYVRYANQAPEEKLLKSAYLTPTSLGVILAKMHEHQMADRGGGQSGEKESFSGMFCGNLEEPLYWSVS
PAKMKFDLDFFDTPYKAVLMTPLILVDDETLQPEQAILLESNVPGIIHKNVYHHFALQIRRAHLRSFSRLRDITIPEALF
GSFLENALPVFKEYAEVSNVEVLNSFVTLPYVEDIHGECNISYLDGELEAKLYFIYDSLKIPAAAFSLKYQDVRAFIRED
GILARNLVEERKIIEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPETLSDQFIYDETVFDLSFREGT
EINTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKKGRVKTSRRGRSAGSAKLPCILVLDLEKISPVIQIFNEIGFK
VLDDFVEKCPLWSLTGISPELFKGLPVNFTMTDKLAEIQKQIRGEVDFAFQDVPKQIQATLRSYQTEGIHWLERLRKMHL
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMIVDGVPSYRRRQLADLSDYDVA
ITSYNLLQKDIDIYKDFVFDYVVLDEAHHIKNRTTRNAKSVKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYD
RFVGKYIRTGNYMGNKTDNMIALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTESQRELYHSYAASAKKELSRLVKQ
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLFSQYTKMLSIIKKDLEASGVR
FVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLV
TLNTIEEKILTLQNRKKSLVKKVINSDDEVVSKLTWEEVLELLQI

Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger [H]

Homologues:

Organism=Homo sapiens, GI27477070, Length=547, Percent_Identity=35.8318098720293, Blast_Score=314, Evalue=3e-85,
Organism=Homo sapiens, GI21071058, Length=497, Percent_Identity=35.6136820925553, Blast_Score=291, Evalue=3e-78,
Organism=Homo sapiens, GI164419749, Length=489, Percent_Identity=36.40081799591, Blast_Score=290, Evalue=6e-78,
Organism=Homo sapiens, GI21071044, Length=501, Percent_Identity=35.3293413173653, Blast_Score=284, Evalue=4e-76,
Organism=Homo sapiens, GI4557565, Length=519, Percent_Identity=34.4894026974952, Blast_Score=273, Evalue=8e-73,
Organism=Homo sapiens, GI21914927, Length=585, Percent_Identity=31.2820512820513, Blast_Score=263, Evalue=6e-70,
Organism=Homo sapiens, GI192807316, Length=486, Percent_Identity=34.7736625514403, Blast_Score=253, Evalue=1e-66,
Organism=Homo sapiens, GI192807320, Length=483, Percent_Identity=34.7826086956522, Blast_Score=253, Evalue=1e-66,
Organism=Homo sapiens, GI192807318, Length=483, Percent_Identity=34.7826086956522, Blast_Score=253, Evalue=1e-66,
Organism=Homo sapiens, GI192807314, Length=486, Percent_Identity=34.7736625514403, Blast_Score=253, Evalue=1e-66,
Organism=Homo sapiens, GI192807312, Length=483, Percent_Identity=34.7826086956522, Blast_Score=252, Evalue=1e-66,
Organism=Homo sapiens, GI21071056, Length=483, Percent_Identity=34.7826086956522, Blast_Score=252, Evalue=1e-66,
Organism=Homo sapiens, GI192807323, Length=483, Percent_Identity=34.7826086956522, Blast_Score=252, Evalue=1e-66,
Organism=Homo sapiens, GI48255900, Length=483, Percent_Identity=33.9544513457557, Blast_Score=251, Evalue=3e-66,
Organism=Homo sapiens, GI190358534, Length=511, Percent_Identity=32.8767123287671, Blast_Score=251, Evalue=3e-66,
Organism=Homo sapiens, GI48255898, Length=483, Percent_Identity=33.9544513457557, Blast_Score=251, Evalue=4e-66,
Organism=Homo sapiens, GI148612870, Length=460, Percent_Identity=35.2173913043478, Blast_Score=249, Evalue=1e-65,
Organism=Homo sapiens, GI190358536, Length=513, Percent_Identity=31.7738791423002, Blast_Score=248, Evalue=3e-65,
Organism=Homo sapiens, GI190358532, Length=513, Percent_Identity=31.7738791423002, Blast_Score=248, Evalue=3e-65,
Organism=Homo sapiens, GI24308089, Length=488, Percent_Identity=31.9672131147541, Blast_Score=232, Evalue=1e-60,
Organism=Homo sapiens, GI58331268, Length=583, Percent_Identity=31.5608919382504, Blast_Score=229, Evalue=1e-59,
Organism=Homo sapiens, GI52630322, Length=488, Percent_Identity=32.172131147541, Blast_Score=227, Evalue=5e-59,
Organism=Homo sapiens, GI158420731, Length=488, Percent_Identity=32.172131147541, Blast_Score=227, Evalue=6e-59,
Organism=Homo sapiens, GI52630326, Length=488, Percent_Identity=32.172131147541, Blast_Score=226, Evalue=7e-59,
Organism=Homo sapiens, GI51599156, Length=489, Percent_Identity=32.1063394683027, Blast_Score=223, Evalue=9e-58,
Organism=Homo sapiens, GI6912622, Length=504, Percent_Identity=32.9365079365079, Blast_Score=219, Evalue=1e-56,
Organism=Homo sapiens, GI29244924, Length=484, Percent_Identity=32.2314049586777, Blast_Score=218, Evalue=2e-56,
Organism=Homo sapiens, GI118421089, Length=480, Percent_Identity=33.5416666666667, Blast_Score=218, Evalue=4e-56,
Organism=Homo sapiens, GI40807471, Length=598, Percent_Identity=28.7625418060201, Blast_Score=217, Evalue=7e-56,
Organism=Homo sapiens, GI54112403, Length=485, Percent_Identity=31.5463917525773, Blast_Score=216, Evalue=1e-55,
Organism=Homo sapiens, GI114326455, Length=486, Percent_Identity=32.5102880658436, Blast_Score=215, Evalue=2e-55,
Organism=Homo sapiens, GI282165704, Length=486, Percent_Identity=32.5102880658436, Blast_Score=214, Evalue=3e-55,
Organism=Homo sapiens, GI68299795, Length=480, Percent_Identity=31.875, Blast_Score=208, Evalue=2e-53,
Organism=Homo sapiens, GI95147342, Length=485, Percent_Identity=31.1340206185567, Blast_Score=207, Evalue=4e-53,
Organism=Homo sapiens, GI58219008, Length=607, Percent_Identity=28.995057660626, Blast_Score=206, Evalue=1e-52,
Organism=Homo sapiens, GI216548193, Length=525, Percent_Identity=29.5238095238095, Blast_Score=189, Evalue=2e-47,
Organism=Homo sapiens, GI216548186, Length=525, Percent_Identity=29.5238095238095, Blast_Score=189, Evalue=2e-47,
Organism=Homo sapiens, GI146219843, Length=305, Percent_Identity=36.0655737704918, Blast_Score=175, Evalue=2e-43,
Organism=Homo sapiens, GI38708321, Length=321, Percent_Identity=32.7102803738318, Blast_Score=169, Evalue=2e-41,
Organism=Homo sapiens, GI62860046, Length=493, Percent_Identity=29.2089249492901, Blast_Score=167, Evalue=5e-41,
Organism=Homo sapiens, GI56549696, Length=315, Percent_Identity=30.4761904761905, Blast_Score=139, Evalue=2e-32,
Organism=Homo sapiens, GI187761314, Length=425, Percent_Identity=28.2352941176471, Blast_Score=138, Evalue=4e-32,
Organism=Homo sapiens, GI21071060, Length=425, Percent_Identity=28.2352941176471, Blast_Score=138, Evalue=4e-32,
Organism=Homo sapiens, GI21071052, Length=337, Percent_Identity=27.0029673590504, Blast_Score=114, Evalue=7e-25,
Organism=Homo sapiens, GI21071054, Length=337, Percent_Identity=27.0029673590504, Blast_Score=114, Evalue=7e-25,
Organism=Homo sapiens, GI168823443, Length=192, Percent_Identity=34.8958333333333, Blast_Score=92, Evalue=3e-18,
Organism=Homo sapiens, GI20336205, Length=292, Percent_Identity=28.0821917808219, Blast_Score=84, Evalue=8e-16,
Organism=Homo sapiens, GI20336209, Length=292, Percent_Identity=28.0821917808219, Blast_Score=84, Evalue=8e-16,
Organism=Homo sapiens, GI289547541, Length=147, Percent_Identity=31.2925170068027, Blast_Score=70, Evalue=1e-11,
Organism=Homo sapiens, GI27436873, Length=147, Percent_Identity=31.2925170068027, Blast_Score=70, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193204424, Length=563, Percent_Identity=33.0373001776199, Blast_Score=270, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI25144179, Length=456, Percent_Identity=34.8684210526316, Blast_Score=270, Evalue=5e-72,
Organism=Caenorhabditis elegans, GI17539642, Length=483, Percent_Identity=34.7826086956522, Blast_Score=259, Evalue=7e-69,
Organism=Caenorhabditis elegans, GI17551114, Length=481, Percent_Identity=32.8482328482328, Blast_Score=243, Evalue=6e-64,
Organism=Caenorhabditis elegans, GI71991518, Length=488, Percent_Identity=30.1229508196721, Blast_Score=230, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI17569817, Length=508, Percent_Identity=30.9055118110236, Blast_Score=229, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17562600, Length=480, Percent_Identity=31.6666666666667, Blast_Score=228, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI32563629, Length=464, Percent_Identity=34.051724137931, Blast_Score=228, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI71988744, Length=529, Percent_Identity=30.812854442344, Blast_Score=213, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI193203140, Length=513, Percent_Identity=30.2144249512671, Blast_Score=202, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17508659, Length=529, Percent_Identity=30.0567107750473, Blast_Score=195, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI115534248, Length=305, Percent_Identity=38.3606557377049, Blast_Score=193, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI71995707, Length=472, Percent_Identity=31.9915254237288, Blast_Score=189, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI25148960, Length=463, Percent_Identity=26.3498920086393, Blast_Score=124, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25148958, Length=463, Percent_Identity=26.3498920086393, Blast_Score=124, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17552194, Length=463, Percent_Identity=26.3498920086393, Blast_Score=124, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI193203249, Length=151, Percent_Identity=37.7483443708609, Blast_Score=114, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17540630, Length=154, Percent_Identity=37.6623376623377, Blast_Score=113, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17538806, Length=176, Percent_Identity=32.9545454545455, Blast_Score=98, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17561718, Length=135, Percent_Identity=38.5185185185185, Blast_Score=97, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71980419, Length=180, Percent_Identity=31.1111111111111, Blast_Score=77, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6325175, Length=536, Percent_Identity=36.5671641791045, Blast_Score=332, Evalue=2e-91,
Organism=Saccharomyces cerevisiae, GI6324879, Length=463, Percent_Identity=34.9892008639309, Blast_Score=264, Evalue=7e-71,
Organism=Saccharomyces cerevisiae, GI6319722, Length=486, Percent_Identity=32.9218106995885, Blast_Score=261, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6322065, Length=479, Percent_Identity=34.6555323590814, Blast_Score=260, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6324864, Length=511, Percent_Identity=33.0724070450098, Blast_Score=257, Evalue=6e-69,
Organism=Saccharomyces cerevisiae, GI6322495, Length=526, Percent_Identity=32.5095057034221, Blast_Score=244, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6321012, Length=479, Percent_Identity=32.1503131524008, Blast_Score=224, Evalue=7e-59,
Organism=Saccharomyces cerevisiae, GI6319547, Length=498, Percent_Identity=31.5261044176707, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6320541, Length=318, Percent_Identity=35.8490566037736, Blast_Score=191, Evalue=7e-49,
Organism=Saccharomyces cerevisiae, GI6321275, Length=503, Percent_Identity=32.6043737574553, Blast_Score=185, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6321289, Length=347, Percent_Identity=30.835734870317, Blast_Score=165, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6321153, Length=268, Percent_Identity=34.7014925373134, Blast_Score=160, Evalue=9e-40,
Organism=Saccharomyces cerevisiae, GI6319300, Length=267, Percent_Identity=37.4531835205993, Blast_Score=157, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6324765, Length=370, Percent_Identity=28.6486486486486, Blast_Score=127, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6319590, Length=359, Percent_Identity=26.1838440111421, Blast_Score=121, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6323060, Length=353, Percent_Identity=26.628895184136, Blast_Score=99, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6323276, Length=140, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281361889, Length=525, Percent_Identity=35.6190476190476, Blast_Score=302, Evalue=1e-81,
Organism=Drosophila melanogaster, GI24653134, Length=501, Percent_Identity=33.7325349301397, Blast_Score=267, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24653132, Length=501, Percent_Identity=33.7325349301397, Blast_Score=267, Evalue=3e-71,
Organism=Drosophila melanogaster, GI17737463, Length=501, Percent_Identity=33.7325349301397, Blast_Score=267, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24664907, Length=481, Percent_Identity=33.8877338877339, Blast_Score=247, Evalue=3e-65,
Organism=Drosophila melanogaster, GI28574896, Length=481, Percent_Identity=33.8877338877339, Blast_Score=247, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24664914, Length=481, Percent_Identity=33.8877338877339, Blast_Score=247, Evalue=3e-65,
Organism=Drosophila melanogaster, GI17985967, Length=481, Percent_Identity=33.8877338877339, Blast_Score=247, Evalue=3e-65,
Organism=Drosophila melanogaster, GI85724914, Length=533, Percent_Identity=31.8949343339587, Blast_Score=241, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24583161, Length=533, Percent_Identity=31.8949343339587, Blast_Score=240, Evalue=3e-63,
Organism=Drosophila melanogaster, GI24666729, Length=495, Percent_Identity=31.9191919191919, Blast_Score=232, Evalue=1e-60,
Organism=Drosophila melanogaster, GI62472261, Length=497, Percent_Identity=30.784708249497, Blast_Score=214, Evalue=2e-55,
Organism=Drosophila melanogaster, GI281366478, Length=497, Percent_Identity=30.784708249497, Blast_Score=214, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24667055, Length=497, Percent_Identity=30.784708249497, Blast_Score=214, Evalue=2e-55,
Organism=Drosophila melanogaster, GI17137266, Length=485, Percent_Identity=31.9587628865979, Blast_Score=213, Evalue=7e-55,
Organism=Drosophila melanogaster, GI17986031, Length=512, Percent_Identity=31.8359375, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI221330583, Length=512, Percent_Identity=31.8359375, Blast_Score=204, Evalue=3e-52,
Organism=Drosophila melanogaster, GI17136368, Length=518, Percent_Identity=30.1158301158301, Blast_Score=197, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24656966, Length=306, Percent_Identity=37.2549019607843, Blast_Score=180, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24656962, Length=306, Percent_Identity=37.2549019607843, Blast_Score=180, Evalue=6e-45,
Organism=Drosophila melanogaster, GI28573600, Length=306, Percent_Identity=37.2549019607843, Blast_Score=180, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24648168, Length=315, Percent_Identity=33.015873015873, Blast_Score=168, Evalue=2e-41,
Organism=Drosophila melanogaster, GI85724912, Length=317, Percent_Identity=31.2302839116719, Blast_Score=146, Evalue=7e-35,
Organism=Drosophila melanogaster, GI24644932, Length=168, Percent_Identity=38.0952380952381, Blast_Score=113, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24581780, Length=435, Percent_Identity=24.8275862068966, Blast_Score=109, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281361297, Length=160, Percent_Identity=33.75, Blast_Score=90, Evalue=8e-18,
Organism=Drosophila melanogaster, GI21356675, Length=350, Percent_Identity=26, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24650076, Length=350, Percent_Identity=26, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI62484263, Length=163, Percent_Identity=32.5153374233129, Blast_Score=89, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000330
- InterPro:   IPR007527 [H]

Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N; PF04434 SWIM [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 133693; Mature: 133693

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQIRGLYDNVYECEIE
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEHHHHHHHCCEEEEEEE
VDRSKSDTIDSNCDCSYNYDCQHIVALLFYLEKYFNEMVVAYSQEANLETNQEINEEVKK
ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ELQETFVVAASREEERKDREHQKEILSEYIHAANVLSANPFFLPQEYLEKNSAELAVLFV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEE
SSSDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
ECCCCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCEEECCCEEEEEEECC
NASDRKLIDLLIRYVRYANQAPEEKLLKSAYLTPTSLGVILAKMHEHQMADRGGGQSGEK
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ESFSGMFCGNLEEPLYWSVSPAKMKFDLDFFDTPYKAVLMTPLILVDDETLQPEQAILLE
CCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHCCEEEECCCCCCCCCEEEEE
SNVPGIIHKNVYHHFALQIRRAHLRSFSRLRDITIPEALFGSFLENALPVFKEYAEVSNV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
EVLNSFVTLPYVEDIHGECNISYLDGELEAKLYFIYDSLKIPAAAFSLKYQDVRAFIRED
HHHHHHHCCCCHHHCCCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
GILARNLVEERKIIEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPET
CHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCHH
LSDQFIYDETVFDLSFREGTEINTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKKG
HCCCEEECCCEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RVKTSRRGRSAGSAKLPCILVLDLEKISPVIQIFNEIGFKVLDDFVEKCPLWSLTGISPE
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHH
LFKGLPVNFTMTDKLAEIQKQIRGEVDFAFQDVPKQIQATLRSYQTEGIHWLERLRKMHL
HHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMIV
CCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCHHEEEE
DGVPSYRRRQLADLSDYDVAITSYNLLQKDIDIYKDFVFDYVVLDEAHHIKNRTTRNAKS
CCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDNM
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
IALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTESQRELYHSYAASAKKELSRLVKQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLF
CCCCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHH
SQYTKMLSIIKKDLEASGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNL
HHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEE
VGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLV
EECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
KKVINSDDEVVSKLTWEEVLELLQI
HHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQIRGLYDNVYECEIE
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEHHHHHHHCCEEEEEEE
VDRSKSDTIDSNCDCSYNYDCQHIVALLFYLEKYFNEMVVAYSQEANLETNQEINEEVKK
ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ELQETFVVAASREEERKDREHQKEILSEYIHAANVLSANPFFLPQEYLEKNSAELAVLFV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEEEE
SSSDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
ECCCCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCEEECCCEEEEEEECC
NASDRKLIDLLIRYVRYANQAPEEKLLKSAYLTPTSLGVILAKMHEHQMADRGGGQSGEK
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ESFSGMFCGNLEEPLYWSVSPAKMKFDLDFFDTPYKAVLMTPLILVDDETLQPEQAILLE
CCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHCCEEEECCCCCCCCCEEEEE
SNVPGIIHKNVYHHFALQIRRAHLRSFSRLRDITIPEALFGSFLENALPVFKEYAEVSNV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
EVLNSFVTLPYVEDIHGECNISYLDGELEAKLYFIYDSLKIPAAAFSLKYQDVRAFIRED
HHHHHHHCCCCHHHCCCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
GILARNLVEERKIIEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPET
CHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCHH
LSDQFIYDETVFDLSFREGTEINTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKKG
HCCCEEECCCEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RVKTSRRGRSAGSAKLPCILVLDLEKISPVIQIFNEIGFKVLDDFVEKCPLWSLTGISPE
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHH
LFKGLPVNFTMTDKLAEIQKQIRGEVDFAFQDVPKQIQATLRSYQTEGIHWLERLRKMHL
HHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMIV
CCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCHHEEEE
DGVPSYRRRQLADLSDYDVAITSYNLLQKDIDIYKDFVFDYVVLDEAHHIKNRTTRNAKS
CCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDNM
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
IALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTESQRELYHSYAASAKKELSRLVKQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLF
CCCCEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHH
SQYTKMLSIIKKDLEASGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLISLKAGGTGLNL
HHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEE
VGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLV
EECCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
KKVINSDDEVVSKLTWEEVLELLQI
HHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]