| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
Click here to switch to the map view.
The map label for this gene is 89897872
Identifier: 89897872
GI number: 89897872
Start: 71938
End: 73251
Strand: Direct
Name: 89897872
Synonym: CF0065
Alternate gene names: NA
Gene position: 71938-73251 (Clockwise)
Preceding gene: 89897871
Following gene: 89897873
Centisome position: 6.17
GC content: 46.58
Gene sequence:
>1314_bases ATGCACCAGCTTTTTTCGATAGGCTACAGTCTGATAAGTATCGCTGCTCTGCTCTGGATGGTGTGTGGAGCTCCAAACCG CTTGGAAAATCTTTATGATGTGTCTTTGAAGTTTGACGGGGCATCTGAGAAACCAAAGATATTCCCCCAAATAGGGGACC TCTCTTCGGGGGTCTGGTCTCTGGATTTTCCAGAGCTGAGGGAAAGATTGCCGGATCTGAGACAGGAAATCGTGTTTTTA GGAAGCAATAAGCGCCCCGATGCCTTGGGGGGGAAGTTTTTTCTAGAGCTGGCCACTTCGAAAGATTCATGCGTTGCTAG TGCTAATGAAAAGATATATTTACAAGTTGCCCCGTCCCCTAATGGGGGAATTTTCACCTTTAGTCCTAAGGGGAAGCCCA CGGATTTATGGTTAGAGTGTCGTCCTTTGAGCGTGGATAACCGCATAGAGATAAAGGTGCGTTTGATAGGCGTGAACGGG GAAATAGTTACTTCTCCTAAGGATAGGGAGACTCTATTTTTAAATGCCCCCTCTAAGGGATTAGAGTCCTGGGAAATTGG TGGGGTTCGTGTAGACGCGAGTTTCCCTGTTAAGCAAAAGATTCGTCGCATAGGTGGCGACAAGTTTCTTCTGATGCACG GAGGGGCTGATTATGCGGATAAGGCGGCTAAAGAACGTGTAGACTTTGTTTCTTTATCGAATGAGAACTACAGTCGTTAC CTTGCTGTTGGCGATATTTTGCTTTGGGATGGAAACTGTTGGCAGACGTGTGGGGAATTTCGGGGAGAGAGTTCACAGGC GCCCCTTCTAGAAGTTAAGAAAATAGACGAGAAGGTAATGGTGATAGAGCTCTGGAATGTTGGAGGAACTTCTCATCAGT CTATGAGTTTAGTGAAAACCATGAGCTCTCTTATAGAGATTGCGGAGATCGTTAAGGAATTTGAGTTTGTTGGGATGCGC TCCTGGTCCCGCCCCATAGTGCAAGTTGGGGGGCAGAGAATGATTCTTTCCCCCGATGATTGGGTAGTATACACAGGAAA GACATGGGAAAAGATTGCTCGCAAAGAACAATTGGAAGATTACCTGTCGGGGAAAATTCAGGGGCCGTTATTGGTTTTTG ATAAAATAGAAAAAGAATCTAGAGAGTTTGTTGTGCGCGCGCATGTTTTTAATGCACAAAGGACTCTAGTAGAGGCTGTG ACACTGCCTTTGAAACAGGGTTTTGATTCTGGATCCGCTGCCGCTAAAGAAGAGGCACATCCAGGGAGACCGCTGCTTGC TGGTAGTGAGGGAACCAATAGTGGGGGATCATAA
Upstream 100 bases:
>100_bases AATTATTTTTAATGTTAAACATAGTTGCTTTTGTTTGTATAAATTGATTTTTTTTCTCTAATCGGTTATCTTATAACTTT ATTTTTGGCTTGTTTCTAGT
Downstream 100 bases:
>100_bases ATGCGTTTTTTGCGTCATCCTTTAGTTTATTTCTTTGGGTTGTCAAGTTTAGCGTGTTGCACGCCAGGACAGGCCTTAAC TATTTCAGAAAAAGCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MHQLFSIGYSLISIAALLWMVCGAPNRLENLYDVSLKFDGASEKPKIFPQIGDLSSGVWSLDFPELRERLPDLRQEIVFL GSNKRPDALGGKFFLELATSKDSCVASANEKIYLQVAPSPNGGIFTFSPKGKPTDLWLECRPLSVDNRIEIKVRLIGVNG EIVTSPKDRETLFLNAPSKGLESWEIGGVRVDASFPVKQKIRRIGGDKFLLMHGGADYADKAAKERVDFVSLSNENYSRY LAVGDILLWDGNCWQTCGEFRGESSQAPLLEVKKIDEKVMVIELWNVGGTSHQSMSLVKTMSSLIEIAEIVKEFEFVGMR SWSRPIVQVGGQRMILSPDDWVVYTGKTWEKIARKEQLEDYLSGKIQGPLLVFDKIEKESREFVVRAHVFNAQRTLVEAV TLPLKQGFDSGSAAAKEEAHPGRPLLAGSEGTNSGGS
Sequences:
>Translated_437_residues MHQLFSIGYSLISIAALLWMVCGAPNRLENLYDVSLKFDGASEKPKIFPQIGDLSSGVWSLDFPELRERLPDLRQEIVFL GSNKRPDALGGKFFLELATSKDSCVASANEKIYLQVAPSPNGGIFTFSPKGKPTDLWLECRPLSVDNRIEIKVRLIGVNG EIVTSPKDRETLFLNAPSKGLESWEIGGVRVDASFPVKQKIRRIGGDKFLLMHGGADYADKAAKERVDFVSLSNENYSRY LAVGDILLWDGNCWQTCGEFRGESSQAPLLEVKKIDEKVMVIELWNVGGTSHQSMSLVKTMSSLIEIAEIVKEFEFVGMR SWSRPIVQVGGQRMILSPDDWVVYTGKTWEKIARKEQLEDYLSGKIQGPLLVFDKIEKESREFVVRAHVFNAQRTLVEAV TLPLKQGFDSGSAAAKEEAHPGRPLLAGSEGTNSGGS >Mature_437_residues MHQLFSIGYSLISIAALLWMVCGAPNRLENLYDVSLKFDGASEKPKIFPQIGDLSSGVWSLDFPELRERLPDLRQEIVFL GSNKRPDALGGKFFLELATSKDSCVASANEKIYLQVAPSPNGGIFTFSPKGKPTDLWLECRPLSVDNRIEIKVRLIGVNG EIVTSPKDRETLFLNAPSKGLESWEIGGVRVDASFPVKQKIRRIGGDKFLLMHGGADYADKAAKERVDFVSLSNENYSRY LAVGDILLWDGNCWQTCGEFRGESSQAPLLEVKKIDEKVMVIELWNVGGTSHQSMSLVKTMSSLIEIAEIVKEFEFVGMR SWSRPIVQVGGQRMILSPDDWVVYTGKTWEKIARKEQLEDYLSGKIQGPLLVFDKIEKESREFVVRAHVFNAQRTLVEAV TLPLKQGFDSGSAAAKEEAHPGRPLLAGSEGTNSGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48446; Mature: 48446
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQLFSIGYSLISIAALLWMVCGAPNRLENLYDVSLKFDGASEKPKIFPQIGDLSSGVWS CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEE LDFPELRERLPDLRQEIVFLGSNKRPDALGGKFFLELATSKDSCVASANEKIYLQVAPSP CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCEEEEEECCCC NGGIFTFSPKGKPTDLWLECRPLSVDNRIEIKVRLIGVNGEIVTSPKDRETLFLNAPSKG CCCEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCEEEECCCCCCEEEEECCCCC LESWEIGGVRVDASFPVKQKIRRIGGDKFLLMHGGADYADKAAKERVDFVSLSNENYSRY CCCEECCCEEEECCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHEEEEEECCCCCEEE LAVGDILLWDGNCWQTCGEFRGESSQAPLLEVKKIDEKVMVIELWNVGGTSHQSMSLVKT EEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHH MSSLIEIAEIVKEFEFVGMRSWSRPIVQVGGQRMILSPDDWVVYTGKTWEKIARKEQLED HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCEEEECCCHHHHHHHHHHHHH YLSGKIQGPLLVFDKIEKESREFVVRAHVFNAQRTLVEAVTLPLKQGFDSGSAAAKEEAH HHCCCCCCCEEEEEHHCCCCHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC PGRPLLAGSEGTNSGGS CCCCEEECCCCCCCCCC >Mature Secondary Structure MHQLFSIGYSLISIAALLWMVCGAPNRLENLYDVSLKFDGASEKPKIFPQIGDLSSGVWS CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEE LDFPELRERLPDLRQEIVFLGSNKRPDALGGKFFLELATSKDSCVASANEKIYLQVAPSP CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCEEEEEECCCC NGGIFTFSPKGKPTDLWLECRPLSVDNRIEIKVRLIGVNGEIVTSPKDRETLFLNAPSKG CCCEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCEEEECCCCCCEEEEECCCCC LESWEIGGVRVDASFPVKQKIRRIGGDKFLLMHGGADYADKAAKERVDFVSLSNENYSRY CCCEECCCEEEECCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHEEEEEECCCCCEEE LAVGDILLWDGNCWQTCGEFRGESSQAPLLEVKKIDEKVMVIELWNVGGTSHQSMSLVKT EEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHH MSSLIEIAEIVKEFEFVGMRSWSRPIVQVGGQRMILSPDDWVVYTGKTWEKIARKEQLED HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCEEEECCCHHHHHHHHHHHHH YLSGKIQGPLLVFDKIEKESREFVVRAHVFNAQRTLVEAVTLPLKQGFDSGSAAAKEEAH HHCCCCCCCEEEEEHHCCCCHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC PGRPLLAGSEGTNSGGS CCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA