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The map label for this gene is pqqC

Identifier: 89897824

GI number: 89897824

Start: 15577

End: 16281

Strand: Direct

Name: pqqC

Synonym: CF0017

Alternate gene names: NA

Gene position: 15577-16281 (Clockwise)

Preceding gene: 89897823

Following gene: 89897830

Centisome position: 1.34

GC content: 36.31

Gene sequence:

>705_bases
ATGAAACCCGATTTAGATTTGTTAGATAAAAACATCCAAGAAAAACACATGTTAAACCATCCTTTCTATATGAAATGGTC
TAGGGGGGAATTAACGAAAGAACAGTTACAGACCTATGCTAAGGATTACTATCTCCATATCAAAGCTTTTCCTCGTTATC
TTTCATCTCTTCATAGTCGCTGTGACAATTTAGAAGCTCGTAAATTGCTTCTTGATAATCTTATGGATGAAGAAACAGGT
CACCCTAATCATATAGATCTTTGGAAAAACTTTGCGTATGCTTTAGGTGTTACTGAAGAAGAACTAGAAAATCATATTCC
TAGTGCAGCAGCTCAGAAGAAGGTTGATACATTTTTACGTTGGTGTACTGGAGATTCTTTGTCTGCGGGTATTTCTGCTT
TATACACCTATGAAAGCCAAATCCCTGCAGTTGCGGAGACAAAAATTTCTGGATTAAAACAATATTTCGGTTTTACTGCT
CCCGAGGATTATGAGTATTTCACAGTACATCAAGATGTAGACGTGAGACATTCTCGTGAGGAAAGAGAACTAATACAGGC
GTTGCAGAATAACGATGGTAATAAGGTTTTACAAGCTTCTAAAGAAGTATGTGATGCTTTATATGACTTTTTAGATTCTT
TCTTAGATGAAGAGAATTCTTGTTCAGAGACTGTTACTTCGTGTTGCTGTAAGTGTCGTCATTGA

Upstream 100 bases:

>100_bases
TTATCGTTGTTAGGTATAGATGAAGCTGAAGATTTATACGGTCCTATATTGAGTTCTATAGCATGGGAGTCTACACAGTT
TTAACTTTTTGGAGGCGTTA

Downstream 100 bases:

>100_bases
TTTGGATTTTTCTCCTTCTCTTTGTACAACTAAGAGAAGGAGAATCTAGAAATTTAATTAAACCACAGGTTGTATGGATT
GCTCTTCTTTTTTCTCCTCT

Product: coenzyme PQQ synthesis protein C

Products: NA

Alternate protein names: Chlamydia protein associating with death domains; CADD [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKPDLDLLDKNIQEKHMLNHPFYMKWSRGELTKEQLQTYAKDYYLHIKAFPRYLSSLHSRCDNLEARKLLLDNLMDEETG
HPNHIDLWKNFAYALGVTEEELENHIPSAAAQKKVDTFLRWCTGDSLSAGISALYTYESQIPAVAETKISGLKQYFGFTA
PEDYEYFTVHQDVDVRHSREERELIQALQNNDGNKVLQASKEVCDALYDFLDSFLDEENSCSETVTSCCCKCRH

Sequences:

>Translated_234_residues
MKPDLDLLDKNIQEKHMLNHPFYMKWSRGELTKEQLQTYAKDYYLHIKAFPRYLSSLHSRCDNLEARKLLLDNLMDEETG
HPNHIDLWKNFAYALGVTEEELENHIPSAAAQKKVDTFLRWCTGDSLSAGISALYTYESQIPAVAETKISGLKQYFGFTA
PEDYEYFTVHQDVDVRHSREERELIQALQNNDGNKVLQASKEVCDALYDFLDSFLDEENSCSETVTSCCCKCRH
>Mature_234_residues
MKPDLDLLDKNIQEKHMLNHPFYMKWSRGELTKEQLQTYAKDYYLHIKAFPRYLSSLHSRCDNLEARKLLLDNLMDEETG
HPNHIDLWKNFAYALGVTEEELENHIPSAAAQKKVDTFLRWCTGDSLSAGISALYTYESQIPAVAETKISGLKQYFGFTA
PEDYEYFTVHQDVDVRHSREERELIQALQNNDGNKVLQASKEVCDALYDFLDSFLDEENSCSETVTSCCCKCRH

Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines [H]

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Secreted. Note=Secreted into the host cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 27090; Mature: 27090

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDLDLLDKNIQEKHMLNHPFYMKWSRGELTKEQLQTYAKDYYLHIKAFPRYLSSLHSR
CCCCHHHHHCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CDNLEARKLLLDNLMDEETGHPNHIDLWKNFAYALGVTEEELENHIPSAAAQKKVDTFLR
HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH
WCTGDSLSAGISALYTYESQIPAVAETKISGLKQYFGFTAPEDYEYFTVHQDVDVRHSRE
HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHH
ERELIQALQNNDGNKVLQASKEVCDALYDFLDSFLDEENSCSETVTSCCCKCRH
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPDLDLLDKNIQEKHMLNHPFYMKWSRGELTKEQLQTYAKDYYLHIKAFPRYLSSLHSR
CCCCHHHHHCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CDNLEARKLLLDNLMDEETGHPNHIDLWKNFAYALGVTEEELENHIPSAAAQKKVDTFLR
HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHH
WCTGDSLSAGISALYTYESQIPAVAETKISGLKQYFGFTAPEDYEYFTVHQDVDVRHSRE
HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHH
ERELIQALQNNDGNKVLQASKEVCDALYDFLDSFLDEENSCSETVTSCCCKCRH
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]